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Add allele frequency? #198

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LouChen-med opened this issue Nov 30, 2024 · 1 comment
Open

Add allele frequency? #198

LouChen-med opened this issue Nov 30, 2024 · 1 comment
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enhancement New feature or request help wanted Extra attention is needed

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@LouChen-med
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Hello, could the MSS package have a function to add allele frequency? I think it's quite necessary for the data with missing allele frequency. Specifically, based on rsid, effect allele, other allele, and the corresponding population like the European population, to add the missing effect allele frequency.

THANKS!!!

@Al-Murphy
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Hi!

This is not something I would have time to add now but I do agree it could be useful. One would need to consider where to source this information from for differing populations (are they currently housed in Bioconductor and kept up-to-date)?

If you, or someone else, wants to give this a go, I'm more than happy to review and add the functionality as a pull request.

Cheers,
Alan.

@Al-Murphy Al-Murphy added enhancement New feature or request help wanted Extra attention is needed labels Dec 2, 2024
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Labels
enhancement New feature or request help wanted Extra attention is needed
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