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switch tax_glom*/agglomeration language to aggregate #28

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taylorreiter opened this issue Oct 25, 2022 · 0 comments
Open

switch tax_glom*/agglomeration language to aggregate #28

taylorreiter opened this issue Oct 25, 2022 · 0 comments

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@taylorreiter
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@elizabethmcd pointed out in #23:

This might just be a personal thing, but the term agglomeration and referring to the function tax_glom_taxonomy_annotate seems a little confusing and maybe doesn't clearly convey what this function is doing. I think in R the similar but more known action is aggregating and people might be more familiar with this? Up to you.

I was copying the syntax/naming of the phyloseq function that does this: https://rdrr.io/bioc/phyloseq/man/tax_glom.html

I wanted to record this feedback because if we keep getting it then I want to change the wording for the function.

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