diff --git a/modules/local/initial_submission/main_full.nf b/modules/local/initial_submission/main_full.nf index 95dda45a..cace4324 100644 --- a/modules/local/initial_submission/main_full.nf +++ b/modules/local/initial_submission/main_full.nf @@ -11,7 +11,7 @@ process SUBMISSION_FULL { conda (params.enable_conda ? params.env_yml : null) container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? - 'cdcgov/seqsender-dev' : 'cdcgov/seqsender-dev' }" + 'staphb/tostadas:latest' : 'staphb/tostadas:latest' }" input: tuple val(meta), path(validated_meta_path), path(fasta_path), path(fastq_1), path(fastq_2), path(annotations_path) diff --git a/modules/local/initial_submission/main_genbank.nf b/modules/local/initial_submission/main_genbank.nf index 7e6c7221..1e050209 100644 --- a/modules/local/initial_submission/main_genbank.nf +++ b/modules/local/initial_submission/main_genbank.nf @@ -11,7 +11,7 @@ process SUBMISSION_GENBANK { conda (params.enable_conda ? params.env_yml : null) container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? - 'cdcgov/seqsender-dev' : 'cdcgov/seqsender-dev' }" + 'staphb/tostadas:latest' : 'staphb/tostadas:latest' }" input: tuple val(meta), path(validated_meta_path), path(fasta_path), path(annotations_path) diff --git a/modules/local/initial_submission/main_sra.nf b/modules/local/initial_submission/main_sra.nf index fa327429..139acd7d 100644 --- a/modules/local/initial_submission/main_sra.nf +++ b/modules/local/initial_submission/main_sra.nf @@ -11,7 +11,7 @@ process SUBMISSION_SRA { conda (params.enable_conda ? params.env_yml : null) container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? - 'cdcgov/seqsender-dev' : 'cdcgov/seqsender-dev' }" + 'staphb/tostadas:latest' : 'staphb/tostadas:latest' }" input: tuple val(meta), path(validated_meta_path), path(fastq_1), path(fastq_2)