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Develop and document curation process to import from MONDO/HP #388

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tcezard opened this issue Jun 29, 2023 · 0 comments
Open

Develop and document curation process to import from MONDO/HP #388

tcezard opened this issue Jun 29, 2023 · 0 comments

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@tcezard
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tcezard commented Jun 29, 2023

When an exact term exist from MONDO or HP, we can import it directly to EFO.
To do that we need to:

  • Ensure that an equivalent term does not exist in EFO already.
  • Find the parent term this MONDO/HP term should be attached to in EFO.

We can already se the manual curation filters to detect clinvar labels that have exact match in MONDO/HP and no detect good match (by ZOOMA) in EFO.
We need to ensure that the ZOOMA search is sufficient to retrieve the existing EFO match.
We need to check if we efficiently find the parent term in EFO

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