diff --git a/Arith/src/rten.hxx b/Arith/src/rten.hxx index 3926e1452..9c276417c 100644 --- a/Arith/src/rten.hxx +++ b/Arith/src/rten.hxx @@ -177,7 +177,7 @@ public: template friend constexpr ARITH_INLINE ARITH_DEVICE ARITH_HOST void fmap_(const F &f, const rten &x, const rten &...args) { - fmap_(f, x.args, args.elts...); + fmap_(f, x.elts, args.elts...); } template < diff --git a/Derivs/src/derivs.cxx b/Derivs/src/derivs.cxx index 3f209aada..9b51fe7dc 100644 --- a/Derivs/src/derivs.cxx +++ b/Derivs/src/derivs.cxx @@ -11,8 +11,7 @@ using namespace Loop; template CCTK_ATTRIBUTE_NOINLINE void calc_copy(const GF3D5 &gf, const GF3D5layout layout, - const GridDescBaseDevice &grid, const GF3D2 &gf0, - const vect dx) { + const GridDescBaseDevice &grid, const GF3D2 &gf0) { using vreal = simd; using vbool = simdl; constexpr std::size_t vsize = std::tuple_size_v; @@ -27,6 +26,24 @@ calc_copy(const GF3D5 &gf, const GF3D5layout layout, }); } +template +CCTK_ATTRIBUTE_NOINLINE void +calc_copy(const vec, dim> &gf, const GF3D5layout layout, + const GridDescBaseDevice &grid, const vec, dim> &gf0) { + for (int a = 0; a < dim; ++a) + calc_copy(gf(a), layout, grid, gf0(a)); +}; + +template +CCTK_ATTRIBUTE_NOINLINE void calc_copy(const smat, dim> &gf, + const GF3D5layout layout, + const GridDescBaseDevice &grid, + const smat, dim> &gf0) { + for (int a = 0; a < dim; ++a) + for (int b = a; b < dim; ++b) + calc_copy(gf(a, b), layout, grid, gf0(a, b)); +}; + template CCTK_ATTRIBUTE_NOINLINE void calc_derivs(const GF3D5 &gf, const vec, dim> &dgf, @@ -44,9 +61,8 @@ calc_derivs(const GF3D5 &gf, const vec, dim> &dgf, grid.nghostzones, [=] CCTK_DEVICE(const PointDesc &p) CCTK_ATTRIBUTE_ALWAYS_INLINE { const vbool mask = mask_for_loop_tail(p.i, p.imax); - // Take account of ghost points - const vbool mask1 = - mask_for_loop_tail(p.i, p.imax + deriv_order / 2); + // Take ghost points into account + const vbool mask1 = mask_for_loop_tail(p.i, p.imax + 2 / 2); const GF3D5index index(layout, p.I); const auto val = gf0(mask, p.I); const auto dval = calc_deriv<2>(gf0, mask1, p.I, dx); @@ -60,9 +76,8 @@ calc_derivs(const GF3D5 &gf, const vec, dim> &dgf, grid.nghostzones, [=] CCTK_DEVICE(const PointDesc &p) CCTK_ATTRIBUTE_ALWAYS_INLINE { const vbool mask = mask_for_loop_tail(p.i, p.imax); - // Take account of ghost points - const vbool mask1 = - mask_for_loop_tail(p.i, p.imax + deriv_order / 2); + // Take ghost points into account + const vbool mask1 = mask_for_loop_tail(p.i, p.imax + 4 / 2); const GF3D5index index(layout, p.I); const auto val = gf0(mask, p.I); const auto dval = calc_deriv<4>(gf0, mask1, p.I, dx); @@ -76,9 +91,8 @@ calc_derivs(const GF3D5 &gf, const vec, dim> &dgf, grid.nghostzones, [=] CCTK_DEVICE(const PointDesc &p) CCTK_ATTRIBUTE_ALWAYS_INLINE { const vbool mask = mask_for_loop_tail(p.i, p.imax); - // Take account of ghost points - const vbool mask1 = - mask_for_loop_tail(p.i, p.imax + deriv_order / 2); + // Take ghost points into account + const vbool mask1 = mask_for_loop_tail(p.i, p.imax + 6 / 2); const GF3D5index index(layout, p.I); const auto val = gf0(mask, p.I); const auto dval = calc_deriv<6>(gf0, mask1, p.I, dx); @@ -87,11 +101,50 @@ calc_derivs(const GF3D5 &gf, const vec, dim> &dgf, }); break; + case 8: + grid.loop_int_device( + grid.nghostzones, + [=] CCTK_DEVICE(const PointDesc &p) CCTK_ATTRIBUTE_ALWAYS_INLINE { + const vbool mask = mask_for_loop_tail(p.i, p.imax); + // Take ghost points into account + const vbool mask1 = mask_for_loop_tail(p.i, p.imax + 8 / 2); + const GF3D5index index(layout, p.I); + const auto val = gf0(mask, p.I); + const auto dval = calc_deriv<8>(gf0, mask1, p.I, dx); + gf.store(mask, index, val); + dgf.store(mask, index, dval); + }); + break; + default: CCTK_VERROR("Unsupported derivative order %d", deriv_order); } } +template +CCTK_ATTRIBUTE_NOINLINE void +calc_derivs(const vec, dim> &gf, + const vec, dim>, dim> &dgf, const GF3D5layout layout, + const GridDescBaseDevice &grid, const vec, dim> &gf0, + const vect dx, const int deriv_order) { + for (int a = 0; a < dim; ++a) + calc_derivs(gf(a), dgf(a), layout, grid, gf0(a), dx, + deriv_order); +} + +template +CCTK_ATTRIBUTE_NOINLINE void +calc_derivs(const smat, dim> &gf, + const smat, dim>, dim> &dgf, const GF3D5layout layout, + const GridDescBaseDevice &grid, + const smat, dim> &gf0, const vect dx, + const int deriv_order) { + for (int a = 0; a < dim; ++a) + for (int b = a; b < dim; ++b) + calc_derivs(gf(a, b), dgf(a, b), layout, grid, gf0(a, b), dx, + deriv_order); +} + template CCTK_ATTRIBUTE_NOINLINE void calc_derivs2(const GF3D5 &gf, const vec, dim> &dgf, @@ -109,9 +162,8 @@ calc_derivs2(const GF3D5 &gf, const vec, dim> &dgf, grid.nghostzones, [=] CCTK_DEVICE(const PointDesc &p) CCTK_ATTRIBUTE_ALWAYS_INLINE { const vbool mask = mask_for_loop_tail(p.i, p.imax); - // Take account of ghost points - const vbool mask1 = - mask_for_loop_tail(p.i, p.imax + deriv_order / 2); + // Take ghost points into account + const vbool mask1 = mask_for_loop_tail(p.i, p.imax + 2 / 2); const GF3D5index index(layout, p.I); const auto val = gf0(mask, p.I); const auto dval = calc_deriv<2>(gf0, mask1, p.I, dx); @@ -127,9 +179,8 @@ calc_derivs2(const GF3D5 &gf, const vec, dim> &dgf, grid.nghostzones, [=] CCTK_DEVICE(const PointDesc &p) CCTK_ATTRIBUTE_ALWAYS_INLINE { const vbool mask = mask_for_loop_tail(p.i, p.imax); - // Take account of ghost points - const vbool mask1 = - mask_for_loop_tail(p.i, p.imax + deriv_order / 2); + // Take ghost points into account + const vbool mask1 = mask_for_loop_tail(p.i, p.imax + 4 / 2); const GF3D5index index(layout, p.I); const auto val = gf0(mask, p.I); const auto dval = calc_deriv<4>(gf0, mask1, p.I, dx); @@ -145,9 +196,8 @@ calc_derivs2(const GF3D5 &gf, const vec, dim> &dgf, grid.nghostzones, [=] CCTK_DEVICE(const PointDesc &p) CCTK_ATTRIBUTE_ALWAYS_INLINE { const vbool mask = mask_for_loop_tail(p.i, p.imax); - // Take account of ghost points - const vbool mask1 = - mask_for_loop_tail(p.i, p.imax + deriv_order / 2); + // Take ghost points into account + const vbool mask1 = mask_for_loop_tail(p.i, p.imax + 6 / 2); const GF3D5index index(layout, p.I); const auto val = gf0(mask, p.I); const auto dval = calc_deriv<6>(gf0, mask1, p.I, dx); @@ -158,84 +208,108 @@ calc_derivs2(const GF3D5 &gf, const vec, dim> &dgf, }); break; + case 8: + grid.loop_int_device( + grid.nghostzones, + [=] CCTK_DEVICE(const PointDesc &p) CCTK_ATTRIBUTE_ALWAYS_INLINE { + const vbool mask = mask_for_loop_tail(p.i, p.imax); + // Take ghost points into account + const vbool mask1 = mask_for_loop_tail(p.i, p.imax + 8 / 2); + const GF3D5index index(layout, p.I); + const auto val = gf0(mask, p.I); + const auto dval = calc_deriv<8>(gf0, mask1, p.I, dx); + const auto ddval = calc_deriv2<8>(gf0, mask1, p.I, dx); + gf.store(mask, index, val); + dgf.store(mask, index, dval); + ddgf.store(mask, index, ddval); + }); + break; + default: CCTK_VERROR("Unsupported derivative order %d", deriv_order); } } +template +CCTK_ATTRIBUTE_NOINLINE void calc_derivs2( + const vec, dim> &gf, const vec, dim>, dim> &dgf, + const vec, dim>, dim> &ddgf, const GF3D5layout layout, + const GridDescBaseDevice &grid, const vec, dim> &gf0, + const vect dx, const int deriv_order) { + for (int a = 0; a < dim; ++a) + calc_derivs2(gf(a), dgf(a), ddgf(a), layout, grid, gf0(a), dx, + deriv_order); +} + +template +CCTK_ATTRIBUTE_NOINLINE void calc_derivs2( + const smat, dim> &gf, const smat, dim>, dim> &dgf, + const smat, dim>, dim> &ddgf, const GF3D5layout layout, + const GridDescBaseDevice &grid, const smat, dim> &gf0, + const vect dx, const int deriv_order) { + for (int a = 0; a < dim; ++a) + for (int b = a; b < dim; ++b) + calc_derivs2(gf(a, b), dgf(a, b), ddgf(a, b), layout, grid, + gf0(a, b), dx, deriv_order); +} + //////////////////////////////////////////////////////////////////////////////// // Template instantiations using T = CCTK_REAL; -template CCTK_DEVICE CCTK_HOST Arith::vec, Loop::dim> -calc_deriv<2>(const Loop::GF3D2 &gf, const Arith::simdl &mask, - const Arith::vect &I, - const Arith::vect &dx); -template CCTK_DEVICE CCTK_HOST Arith::vec, Loop::dim> -calc_deriv<4>(const Loop::GF3D2 &gf, const Arith::simdl &mask, - const Arith::vect &I, - const Arith::vect &dx); -template CCTK_DEVICE CCTK_HOST Arith::vec, Loop::dim> -calc_deriv<6>(const Loop::GF3D2 &gf, const Arith::simdl &mask, - const Arith::vect &I, - const Arith::vect &dx); - -template CCTK_DEVICE CCTK_HOST Arith::vec -calc_deriv<2>(const Loop::GF3D2 &gf, - const Arith::vect &I, - const Arith::vect &dx); -template CCTK_DEVICE CCTK_HOST Arith::vec -calc_deriv<4>(const Loop::GF3D2 &gf, - const Arith::vect &I, - const Arith::vect &dx); -template CCTK_DEVICE CCTK_HOST Arith::vec -calc_deriv<6>(const Loop::GF3D2 &gf, - const Arith::vect &I, - const Arith::vect &dx); - -template CCTK_DEVICE CCTK_HOST Arith::smat, Loop::dim> -calc_deriv2<2>(const Loop::GF3D2 &gf, const Arith::simdl &mask, - const Arith::vect &I, - const Arith::vect &dx); -template CCTK_DEVICE CCTK_HOST Arith::smat, Loop::dim> -calc_deriv2<4>(const Loop::GF3D2 &gf, const Arith::simdl &mask, - const Arith::vect &I, - const Arith::vect &dx); -template CCTK_DEVICE CCTK_HOST Arith::smat, Loop::dim> -calc_deriv2<6>(const Loop::GF3D2 &gf, const Arith::simdl &mask, - const Arith::vect &I, - const Arith::vect &dx); - -template CCTK_DEVICE CCTK_HOST Arith::smat -calc_deriv2<2>(const Loop::GF3D2 &gf, - const Arith::vect &I, - const Arith::vect &dx); -template CCTK_DEVICE CCTK_HOST Arith::smat -calc_deriv2<4>(const Loop::GF3D2 &gf, - const Arith::vect &I, - const Arith::vect &dx); -template CCTK_DEVICE CCTK_HOST Arith::smat -calc_deriv2<6>(const Loop::GF3D2 &gf, - const Arith::vect &I, - const Arith::vect &dx); - template void calc_copy<0, 0, 0>(const GF3D5 &gf, const GF3D5layout layout, const GridDescBaseDevice &grid, - const GF3D2 &gf0, - const vect dx); + const GF3D2 &gf0); + +template void calc_copy<0, 0, 0>(const vec, dim> &gf, + const GF3D5layout layout, + const GridDescBaseDevice &grid, + const vec, dim> &gf0); +template void calc_copy<0, 0, 0>(const smat, dim> &gf, + const GF3D5layout layout, + const GridDescBaseDevice &grid, + const smat, dim> &gf0); template void calc_derivs<0, 0, 0>(const GF3D5 &gf, const vec, dim> &dgf, const GF3D5layout layout, const GridDescBaseDevice &grid, const GF3D2 &gf0, const vect dx, const int deriv_order); +template void calc_derivs<0, 0, 0>(const vec, dim> &gf, + const vec, dim>, dim> &dgf, + const GF3D5layout layout, + const GridDescBaseDevice &grid, + const vec, dim> &gf0, + const vect dx, + const int deriv_order); + +template void calc_derivs<0, 0, 0>(const smat, dim> &gf, + const smat, dim>, dim> &dgf, + const GF3D5layout layout, + const GridDescBaseDevice &grid, + const smat, dim> &gf0, + const vect dx, + const int deriv_order); + template void calc_derivs2<0, 0, 0>(const GF3D5 &gf, const vec, dim> &dgf, const smat, dim> &ddgf, const GF3D5layout layout, const GridDescBaseDevice &grid, const GF3D2 &gf0, const vect dx, const int deriv_order); +template void calc_derivs2<0, 0, 0>( + const vec, dim> &gf, const vec, dim>, dim> &dgf, + const vec, dim>, dim> &ddgf, const GF3D5layout layout, + const GridDescBaseDevice &grid, const vec, dim> &gf0, + const vect dx, const int deriv_order); + +template void calc_derivs2<0, 0, 0>( + const smat, dim> &gf, const smat, dim>, dim> &dgf, + const smat, dim>, dim> &ddgf, const GF3D5layout layout, + const GridDescBaseDevice &grid, const smat, dim> &gf0, + const vect dx, const int deriv_order); + } // namespace Derivs diff --git a/Derivs/src/derivs.hxx b/Derivs/src/derivs.hxx index 18e26418b..6c5fa87e0 100644 --- a/Derivs/src/derivs.hxx +++ b/Derivs/src/derivs.hxx @@ -112,185 +112,198 @@ interp1d(const simdl &mask, const T *restrict const var) { } template > + typename R = std::result_of_t> inline CCTK_ATTRIBUTE_ALWAYS_INLINE CCTK_DEVICE CCTK_HOST std::enable_if_t deriv1d(const TS var, const T dx) { - const T c1 = 1 / (2 * dx); - return c1 * (var(1) - var(-1)); + constexpr T c1 = 1 / T(2); + return (c1 * (var(1) - var(-1))) / dx; } template > + typename R = std::result_of_t> inline CCTK_ATTRIBUTE_ALWAYS_INLINE CCTK_DEVICE CCTK_HOST std::enable_if_t deriv1d(const TS var, const T dx) { - const T c1 = 2 / (3 * dx); - const T c2 = -1 / (12 * dx); - return c2 * (var(2) - var(-2)) + c1 * (var(1) - var(-1)); + constexpr T c1 = 2 / T(3); + constexpr T c2 = -1 / T(12); + return (c2 * (var(2) - var(-2)) + c1 * (var(1) - var(-1))) / dx; } template > + typename R = std::result_of_t> inline CCTK_ATTRIBUTE_ALWAYS_INLINE CCTK_DEVICE CCTK_HOST std::enable_if_t deriv1d(const TS var, const T dx) { - const T c1 = 3 / (4 * dx); - const T c2 = -3 / (20 * dx); - const T c3 = 1 / (60 * dx); - return c3 * (var(3) - var(-3)) + c2 * (var(2) - var(-2)) + - c1 * (var(1) - var(-1)); + constexpr T c1 = 3 / T(4); + constexpr T c2 = -3 / T(20); + constexpr T c3 = 1 / T(60); + return (c3 * (var(3) - var(-3)) + c2 * (var(2) - var(-2)) + + c1 * (var(1) - var(-1))) / + dx; } -template +template > +inline CCTK_ATTRIBUTE_ALWAYS_INLINE + CCTK_DEVICE CCTK_HOST std::enable_if_t + deriv1d(const TS var, const T dx) { + constexpr T c1 = 4 / T(5); + constexpr T c2 = -1 / T(5); + constexpr T c3 = 4 / T(105); + constexpr T c4 = -1 / T(280); + return (c4 * (var(4) - var(-4)) + c3 * (var(3) - var(-3)) + + c2 * (var(2) - var(-2)) + c1 * (var(1) - var(-1))) / + dx; +} + +template > inline CCTK_ATTRIBUTE_ALWAYS_INLINE - CCTK_DEVICE CCTK_HOST std::enable_if_t > - deriv1d_upwind(const simdl &mask, const T *restrict const var, - const std::ptrdiff_t di, const simd &vel, const T dx) { + CCTK_DEVICE CCTK_HOST std::enable_if_t + deriv1d_upwind(const TS var, const T dx, const R vel) { // arXiv:1111.2177 [gr-qc], (71) + const T c1s = 1; + const T c2s = -1 / T(4); + const R symm = c2s * (var(2) - var(-2)) + c1s * (var(1) - var(-1)); + + const T c0a = 3 / T(2); + const T c1a = -1; + const T c2a = 1 / T(4); + const R anti = + c2a * (var(2) + var(-2)) + c1a * (var(1) + var(-1)) + c0a * var(0); + using std::fabs; + return (vel * symm - fabs(vel) * anti) / dx; +} - // if (sign) - // // + [ 0 -1 +1 0 0] - // // + 1/2 [+1 -2 +1 0 0] - // // [+1/2 -2 +3/2 0 0] - // return (1 / T(2) * var[-2 * di] // - // - 2 * var[-di] // - // + 3 / T(2) * var[0]) / - // dx; - // else - // // + [ 0 0 -1 +1 0 ] - // // - 1/2 [ 0 0 +1 -2 +1 ] - // // [ 0 0 -3/2 +2 -1/2] - // return (-3 / T(2) * var[0] // - // + 2 * var[+di] // - // - 1 / T(2) * var[+2 * di]) / - // dx; - - // + 1/2 [+1/2 -2 +3/2 0 0 ] - // + 1/2 [ 0 0 -3/2 +2 -1/2] - // [+1/4 -1 0 +1 -1/4] - constexpr T c1s = 1; - constexpr T c2s = -1 / T(4); - const simd symm = - c2s * (maskz_loadu(mask, &var[2 * di]) - - maskz_loadu(mask, &var[-2 * di])) // - + c1s(maskz_loadu(mask, &var[di]) - maskz_loadu(mask, &var[-di])); - // + 1/2 [+1/2 -2 +3/2 0 0 ] - // - 1/2 [ 0 0 -3/2 +2 -1/2] - // [+1/4 -1 +3/2 -1 +1/4] - constexpr T c0a = 3 / T(2); - constexpr T c1a = -1; - constexpr T c2a = 1 / T(4); - const simd anti = - c2a * (maskz_loadu(mask, &var[2 * di]) + - maskz_loadu(mask, &var[-2 * di])) // - + c1a(maskz_loadu(mask, &var[di]) + maskz_loadu(mask, &var[-di])) // - + c0a * maskz_loadu(mask, &var[0]); +template > +inline CCTK_ATTRIBUTE_ALWAYS_INLINE + CCTK_DEVICE CCTK_HOST std::enable_if_t + deriv1d_upwind(const TS var, const T dx, const R vel) { + // arXiv:1111.2177 [gr-qc], (71) + const T c1s = 7 / T(8); + const T c2s = -1 / T(4); + const T c3s = 1 / T(24); + const R symm = c3s * (var(3) - var(-3)) + c2s * (var(2) - var(-2)) + + c1s * (var(1) - var(-1)); + + const T c0a = 5 / T(6); + const T c1a = -5 / T(8); + const T c2a = 1 / T(4); + const T c3a = -1 / T(24); + const R anti = c3a * (var(3) + var(-3)) + c2a * (var(2) + var(-2)) + + c1a * (var(1) + var(-1)) + c0a * var(0); using std::fabs; return (vel * symm - fabs(vel) * anti) / dx; } -template +template > inline CCTK_ATTRIBUTE_ALWAYS_INLINE - CCTK_DEVICE CCTK_HOST std::enable_if_t > - deriv1d_upwind(const simdl &mask, const T *restrict const var, - const std::ptrdiff_t di, const simd &vel, const T dx) { + CCTK_DEVICE CCTK_HOST std::enable_if_t + deriv1d_upwind(const TS var, const T dx, const R vel) { // arXiv:1111.2177 [gr-qc], (71) + const T c1s = 13 / T(15); + const T c2s = -4 / T(15); + const T c3s = 1 / T(15); + const T c4s = -1 / T(120); + const R symm = c4s * (var(4) - var(-4)) + c3s * (var(3) - var(-3)) + + c2s * (var(2) - var(-2)) + c1s * (var(1) - var(-1)); + + const T c0a = 7 / T(12); + const T c1a = -7 / T(15); + const T c2a = 7 / T(30); + const T c3a = -1 / T(15); + const T c4a = 1 / T(120); + const R anti = c4a * (var(4) + var(-4)) + c3a * (var(3) + var(-3)) + + c2a * (var(2) + var(-2)) + c1a * (var(1) + var(-1)) + + c0a * var(0); + using std::fabs; + return (vel * symm - fabs(vel) * anti) / dx; +} - // A fourth order stencil for a first derivative, shifted by one grid point - - // if (sign) - // return (-1 / T(12) * var[-3 * di] // - // + 1 / T(2) * var[-2 * di] // - // - 3 / T(2) * var[-di] // - // + 5 / T(6) * var[0] // - // + 1 / T(4) * var[+di]) / - // dx; - // else - // return (-1 / T(4) * var[-di] // - // - 5 / T(6) * var[0] // - // + 3 / T(2) * var[+di] // - // - 1 / T(2) * var[+2 * di] // - // + 1 / T(12) * var[+3 * di]) / - // dx; - - constexpr T c1s = 7 / T(8); - constexpr T c2s = -1 / T(4); - constexpr T c3s = 1 / T(24); - const simd symm = - c3s * (maskz_loadu(mask, &var[3 * di]) - - maskz_loadu(mask, &var[-3 * di])) // - + c2s * (maskz_loadu(mask, &var[2 * di]) - - maskz_loadu(mask, &var[-2 * di])) // - + c1s * (maskz_loadu(mask, &var[di]) - maskz_loadu(mask, &var[-di])); - constexpr T c0a = 5 / T(6); - constexpr T c1a = -5 / T(8); - constexpr T c2a = 1 / T(4); - constexpr T c3a = -1 / T(24); - const simd anti = - c3a * (maskz_loadu(mask, &var[3 * di]) + - maskz_loadu(mask, &var[-3 * di])) // - + c2a * (maskz_loadu(mask, &var[2 * di]) + - maskz_loadu(mask, &var[-2 * di])) // - + c1a * (maskz_loadu(mask, &var[di]) + maskz_loadu(mask, &var[-di])) // - + c0a * maskz_loadu(mask, &var[0]); +template > +inline CCTK_ATTRIBUTE_ALWAYS_INLINE + CCTK_DEVICE CCTK_HOST std::enable_if_t + deriv1d_upwind(const TS var, const T dx, const R vel) { + // arXiv:1111.2177 [gr-qc], (71) + const T c1s = 7 / T(8); + const T c2s = -2 / T(7); + const T c3s = 29 / T(336); + const T c4s = -1 / T(56); + const T c5s = 1 / T(560); + const R symm = c5s * (var(5) - var(-5)) + c4s * (var(4) - var(-4)) + + c3s * (var(3) - var(-3)) + c2s * (var(2) - var(-2)) + + c1s * (var(1) - var(-1)); + + const T c0a = 9 / T(20); + const T c1a = -3 / T(8); + const T c2a = 3 / T(14); + const T c3a = -9 / T(112); + const T c4a = 1 / T(56); + const T c5a = -1 / T(560); + const R anti = c5a * (var(5) + var(-5)) + c4a * (var(4) + var(-4)) + + c3a * (var(3) + var(-3)) + c2a * (var(2) + var(-2)) + + c1a * (var(1) + var(-1)) + c0a * var(0); using std::fabs; return (vel * symm - fabs(vel) * anti) / dx; } template > + typename R = std::result_of_t> inline CCTK_ATTRIBUTE_ALWAYS_INLINE CCTK_DEVICE CCTK_HOST std::enable_if_t deriv2_1d(const TS var, const T dx) { - // constexpr T c0 = -2 / pow2(dx); - // constexpr T c1 = 1 / pow2(dx); - // return c1 * (var(-1) + var(1)) + c0 * var(0); - const T c1 = 1 / pow2(dx); - return c1 * ((var(1) - var(0)) - (var(0) - var(-1))); + const T c1 = 1; + return (c1 * ((var(1) - var(0)) - (var(0) - var(-1)))) / pow2(dx); } template > + typename R = std::result_of_t> inline CCTK_ATTRIBUTE_ALWAYS_INLINE CCTK_DEVICE CCTK_HOST std::enable_if_t deriv2_1d(const TS var, const T dx) { - // constexpr T c0 = -5 / T(2); - // constexpr T c1 = 4 / T(3); - // constexpr T c2 = -1 / T(12); - // return (c2 * (var(-2) + var(2)) + c1 * (var(-1) + var(1)) + c0 * var(0)) / - // pow2(dx); constexpr T c1 = 4 / T(3); constexpr T c2 = -1 / T(12); - return (c2 * ((var(+2) - var(+0)) - (var(-0) - var(-2))) + - c1 * ((var(+1) - var(+0)) - (var(-0) - var(-1)))) / + return (c2 * ((var(2) - var(0)) - (var(0) - var(-2))) + + c1 * ((var(1) - var(0)) - (var(0) - var(-1)))) / pow2(dx); } template > + typename R = std::result_of_t> inline CCTK_ATTRIBUTE_ALWAYS_INLINE CCTK_DEVICE CCTK_HOST std::enable_if_t deriv2_1d(const TS var, const T dx) { - // constexpr T c0 = -49 / T(18); - // constexpr T c1 = 3 / T(2); - // constexpr T c2 = -3 / T(20); - // constexpr T c3 = 1 / T(90); - // return (c3 * (var(-3) + var(3)) + c2 * (var(-2) + var(2)) + - // c1 * (var(-1) + var(1)) + c0 * var(0)) / - // pow2(dx); - // constexpr T c0 = -49 / T(18); constexpr T c1 = 3 / T(2); constexpr T c2 = -3 / T(20); constexpr T c3 = 1 / T(90); - return (c3 * ((var(+3) - var(+0)) - (var(-0) - var(-3))) + - c2 * ((var(+2) - var(+0)) - (var(-0) - var(-2))) + - c1 * ((var(+1) - var(+0)) - (var(-0) - var(-1)))) / + return (c3 * ((var(3) - var(0)) - (var(0) - var(-3))) + + c2 * ((var(2) - var(0)) - (var(0) - var(-2))) + + c1 * ((var(1) - var(0)) - (var(0) - var(-1)))) / + pow2(dx); +} + +template > +inline CCTK_ATTRIBUTE_ALWAYS_INLINE + CCTK_DEVICE CCTK_HOST std::enable_if_t + deriv2_1d(const TS var, const T dx) { + constexpr T c1 = 8 / T(5); + constexpr T c2 = -1 / T(5); + constexpr T c3 = 8 / T(315); + constexpr T c4 = -1 / T(560); + return (c4 * ((var(4) - var(0)) - (var(0) - var(-4))) + + c3 * ((var(3) - var(0)) - (var(0) - var(-3))) + + c2 * ((var(2) - var(0)) - (var(0) - var(-2))) + + c1 * ((var(1) - var(0)) - (var(0) - var(-1)))) / pow2(dx); } template > + typename R = std::result_of_t> inline CCTK_ATTRIBUTE_ALWAYS_INLINE CCTK_DEVICE CCTK_HOST R deriv2_2d(const TS var, const T dx, const T dy) { // We assume that the x-direction might be special since it might @@ -383,36 +396,60 @@ deriv2_2d(const TS var, const T dx, const T dy) { } } -template +template > +inline CCTK_ATTRIBUTE_ALWAYS_INLINE + CCTK_DEVICE CCTK_HOST std::enable_if_t + diss1d(const TS var, const T dx) { + const T c0 = 6; + const T c1 = -4; + const T c2 = 1; + return (c2 * (var(2) + var(-2)) + c1 * (var(1) + var(-1)) + c0 * var(0)) / dx; +} + +template > inline CCTK_ATTRIBUTE_ALWAYS_INLINE - CCTK_DEVICE CCTK_HOST std::enable_if_t > - diss1d(const simdl &mask, const T *restrict const var, - const std::ptrdiff_t di, const T dx) { - constexpr T c0 = 6; - constexpr T c1 = -4; - constexpr T c2 = 1; - return (c2 * (maskz_loadu(mask, &var[2 * di]) + - maskz_loadu(mask, &var[-2 * di])) // - + c1 * (maskz_loadu(mask, &var[di]) + maskz_loadu(mask, &var[-di])) // - + c0 * maskz_loadu(mask, &var[0])) / + CCTK_DEVICE CCTK_HOST std::enable_if_t + diss1d(const TS var, const T dx) { + const T c0 = -20; + const T c1 = 15; + const T c2 = -6; + const T c3 = 1; + return (c3 * (var(3) + var(-3)) + c2 * (var(2) + var(-2)) + + c1 * (var(1) + var(-1)) + c0 * var(0)) / dx; } -template +template > inline CCTK_ATTRIBUTE_ALWAYS_INLINE - CCTK_DEVICE CCTK_HOST std::enable_if_t > - diss1d(const simdl &mask, const T *restrict const var, - const std::ptrdiff_t di, const T dx) { - constexpr T c0 = -20; - constexpr T c1 = 15; - constexpr T c2 = -6; - constexpr T c3 = 1; - return (c3 * (maskz_loadu(mask, &var[3 * di]) + - maskz_loadu(mask, &var[-3 * di])) // - + c2 * (maskz_loadu(mask, &var[2 * di]) + - maskz_loadu(mask, &var[-2 * di])) // - + c1 * (maskz_loadu(mask, &var[di]) + maskz_loadu(mask, &var[-di])) // - + c0 * maskz_loadu(mask, &var[0])) / + CCTK_DEVICE CCTK_HOST std::enable_if_t + diss1d(const TS var, const T dx) { + const T c0 = 70; + const T c1 = -56; + const T c2 = 28; + const T c3 = -8; + const T c4 = 1; + return (c4 * (var(4) + var(-4)) + c3 * (var(3) + var(-3)) + + c2 * (var(2) + var(-2)) + c1 * (var(1) + var(-1)) + c0 * var(0)) / + dx; +} + +template > +inline CCTK_ATTRIBUTE_ALWAYS_INLINE + CCTK_DEVICE CCTK_HOST std::enable_if_t + diss1d(const TS var, const T dx) { + const T c0 = -252; + const T c1 = 210; + const T c2 = -120; + const T c3 = 45; + const T c4 = -10; + const T c5 = 1; + return (c5 * (var(5) + var(-5)) + c4 * (var(4) + var(-4)) + + c3 * (var(3) + var(-3)) + c2 * (var(2) + var(-2)) + + c1 * (var(1) + var(-1)) + c0 * var(0)) / dx; } @@ -422,6 +459,133 @@ inline CCTK_ATTRIBUTE_ALWAYS_INLINE // Pointwise multi-dimensional derivative operators +template +inline CCTK_ATTRIBUTE_ALWAYS_INLINE CCTK_DEVICE CCTK_HOST Arith::simd +calc_deriv_upwind(const Loop::GF3D2 &gf, const Arith::simdl &mask, + const Arith::vect &I, + const Arith::vect &dx, + const Arith::vec, Loop::dim> &vel) { + using namespace Arith; + using namespace Loop; + // We use explicit index calculations to avoid unnecessary integer + // multiplications + const T *restrict const ptr = &gf(I); + const std::array offsets{ + gf.delta(1, 0, 0), + gf.delta(0, 1, 0), + gf.delta(0, 0, 1), + }; + return detail::deriv1d_upwind( + [&](int di) CCTK_ATTRIBUTE_ALWAYS_INLINE { + return maskz_loadu(mask, &ptr[di * offsets[0]]); + }, + dx[0], vel(0)) + + detail::deriv1d_upwind( + [&](int di) CCTK_ATTRIBUTE_ALWAYS_INLINE { + return maskz_loadu(mask, &ptr[di * offsets[1]]); + }, + dx[1], vel(1)) + + detail::deriv1d_upwind( + [&](int di) CCTK_ATTRIBUTE_ALWAYS_INLINE { + return maskz_loadu(mask, &ptr[di * offsets[2]]); + }, + dx[2], vel(2)); +} + +template +inline CCTK_ATTRIBUTE_ALWAYS_INLINE CCTK_DEVICE CCTK_HOST T calc_deriv_upwind( + const Loop::GF3D2 &gf, const Arith::vect &I, + const Arith::vect &dx, const Arith::vec &vel) { + using namespace Arith; + using namespace Loop; + // We use explicit index calculations to avoid unnecessary integer + // multiplications + const T *restrict const ptr = &gf(I); + const std::array offsets{ + gf.delta(1, 0, 0), + gf.delta(0, 1, 0), + gf.delta(0, 0, 1), + }; + return detail::deriv1d_upwind( + [&](int di) + CCTK_ATTRIBUTE_ALWAYS_INLINE { return ptr[di * offsets[0]]; }, + dx[0], vel(0)) + + detail::deriv1d_upwind( + [&](int di) + CCTK_ATTRIBUTE_ALWAYS_INLINE { return ptr[di * offsets[1]]; }, + dx[1], vel(1)) + + detail::deriv1d_upwind( + [&](int di) + CCTK_ATTRIBUTE_ALWAYS_INLINE { return ptr[di * offsets[2]]; }, + dx[2], vel(2)); +} + +template +inline CCTK_ATTRIBUTE_ALWAYS_INLINE CCTK_DEVICE CCTK_HOST Arith::simd +calc_diss(const Loop::GF3D2 &gf, const Arith::simdl &mask, + const Arith::vect &I, + const Arith::vect &dx) { + using namespace Arith; + using namespace Loop; + // We use explicit index calculations to avoid unnecessary integer + // multiplications + const T *restrict const ptr = &gf(I); + const std::array offsets{ + gf.delta(1, 0, 0), + gf.delta(0, 1, 0), + gf.delta(0, 0, 1), + }; + constexpr int diss_order = deriv_order + 2; + constexpr int sign = diss_order % 4 == 0 ? -1 : +1; + return sign / T(pown(2, deriv_order + 2)) * + (detail::diss1d( + [&](int di) CCTK_ATTRIBUTE_ALWAYS_INLINE { + return maskz_loadu(mask, &ptr[di * offsets[0]]); + }, + dx[0]) + + detail::diss1d( + [&](int di) CCTK_ATTRIBUTE_ALWAYS_INLINE { + return maskz_loadu(mask, &ptr[di * offsets[1]]); + }, + dx[1]) + + detail::diss1d( + [&](int di) CCTK_ATTRIBUTE_ALWAYS_INLINE { + return maskz_loadu(mask, &ptr[di * offsets[2]]); + }, + dx[2])); +} + +template +inline CCTK_ATTRIBUTE_ALWAYS_INLINE CCTK_DEVICE CCTK_HOST T +calc_diss(const Loop::GF3D2 &gf, const Arith::vect &I, + const Arith::vect &dx) { + using namespace Arith; + using namespace Loop; + // We use explicit index calculations to avoid unnecessary integer + // multiplications + const T *restrict const ptr = &gf(I); + const std::array offsets{ + gf.delta(1, 0, 0), + gf.delta(0, 1, 0), + gf.delta(0, 0, 1), + }; + constexpr int diss_order = deriv_order + 2; + constexpr int sign = diss_order % 4 == 0 ? -1 : +1; + return sign / T(pown(2, deriv_order + 2)) * + (detail::diss1d( + [&](int di) + CCTK_ATTRIBUTE_ALWAYS_INLINE { return ptr[di * offsets[0]]; }, + dx[0]) + + detail::diss1d( + [&](int di) + CCTK_ATTRIBUTE_ALWAYS_INLINE { return ptr[di * offsets[1]]; }, + dx[1]) + + detail::diss1d( + [&](int di) + CCTK_ATTRIBUTE_ALWAYS_INLINE { return ptr[di * offsets[2]]; }, + dx[2])); +} + template inline CCTK_ATTRIBUTE_ALWAYS_INLINE CCTK_DEVICE CCTK_HOST Arith::vec, Loop::dim> @@ -590,11 +754,23 @@ inline CCTK_ATTRIBUTE_ALWAYS_INLINE // Tile-based multi-dimensional operators +template +CCTK_ATTRIBUTE_NOINLINE void calc_copy(const Loop::GF3D5 &gf, + const Loop::GF3D5layout layout, + const Loop::GridDescBaseDevice &grid, + const Loop::GF3D2 &gf0); + template CCTK_ATTRIBUTE_NOINLINE void -calc_copy(const Loop::GF3D5 &gf, const Loop::GF3D5layout layout, - const Loop::GridDescBaseDevice &grid, const Loop::GF3D2 &gf0, - const Arith::vect dx); +calc_copy(const Arith::vec, Loop::dim> &gf, + const Loop::GF3D5layout layout, const Loop::GridDescBaseDevice &grid, + const Arith::vec, Loop::dim> &gf0); + +template +CCTK_ATTRIBUTE_NOINLINE void +calc_copy(const Arith::smat, Loop::dim> &gf, + const Loop::GF3D5layout layout, const Loop::GridDescBaseDevice &grid, + const Arith::smat, Loop::dim> &gf0); template CCTK_ATTRIBUTE_NOINLINE void calc_derivs( @@ -603,6 +779,22 @@ CCTK_ATTRIBUTE_NOINLINE void calc_derivs( const Loop::GF3D2 &gf0, const Arith::vect dx, const int deriv_order); +template +CCTK_ATTRIBUTE_NOINLINE void calc_derivs( + const Arith::vec, Loop::dim> &gf, + const Arith::vec, Loop::dim>, Loop::dim> &dgf, + const Loop::GF3D5layout layout, const Loop::GridDescBaseDevice &grid, + const Arith::vec, Loop::dim> &gf0, + const Arith::vect dx, const int deriv_order); + +template +CCTK_ATTRIBUTE_NOINLINE void calc_derivs( + const Arith::smat, Loop::dim> &gf, + const Arith::smat, Loop::dim>, Loop::dim> &dgf, + const Loop::GF3D5layout layout, const Loop::GridDescBaseDevice &grid, + const Arith::smat, Loop::dim> &gf0, + const Arith::vect dx, const int deriv_order); + template CCTK_ATTRIBUTE_NOINLINE void calc_derivs2( const Loop::GF3D5 &gf, const Arith::vec, Loop::dim> &dgf, @@ -611,6 +803,24 @@ CCTK_ATTRIBUTE_NOINLINE void calc_derivs2( const Loop::GF3D2 &gf0, const Arith::vect dx, const int deriv_order); +template +CCTK_ATTRIBUTE_NOINLINE void calc_derivs2( + const Arith::vec, Loop::dim> &gf, + const Arith::vec, Loop::dim>, Loop::dim> &dgf, + const Arith::vec, Loop::dim>, Loop::dim> &ddgf, + const Loop::GF3D5layout layout, const Loop::GridDescBaseDevice &grid, + const Arith::vec, Loop::dim> &gf0, + const Arith::vect dx, const int deriv_order); + +template +CCTK_ATTRIBUTE_NOINLINE void calc_derivs2( + const Arith::smat, Loop::dim> &gf, + const Arith::smat, Loop::dim>, Loop::dim> &dgf, + const Arith::smat, Loop::dim>, Loop::dim> &ddgf, + const Loop::GF3D5layout layout, const Loop::GridDescBaseDevice &grid, + const Arith::smat, Loop::dim> &gf0, + const Arith::vect dx, const int deriv_order); + } // namespace Derivs #endif // #ifndef CARPETX_DERIVS_DERIVS_HXX diff --git a/TestDerivs/interface.ccl b/TestDerivs/interface.ccl index b0b8ab0f1..fc0369147 100644 --- a/TestDerivs/interface.ccl +++ b/TestDerivs/interface.ccl @@ -20,3 +20,27 @@ CCTK_REAL ddchi TYPE=gf CENTERING={VVV} TAGS='checkpoint="no"' { dxxchi dxychi dxzchi dyychi dyzchi dzzchi } "2nd derivs of test grid function" + +CCTK_REAL chi_diss TYPE=gf CENTERING={VVV} TAGS='checkpoint="no"' "dissipation term" + +CCTK_REAL beta TYPE=gf CENTERING={VVV} +{ + betax, betay, betaz +} "velocity function used for calculating upwind term" + +CCTK_REAL chi_upwind TYPE=gf CENTERING={VVV} TAGS='checkpoint="no"' "upwind term" + +CCTK_REAL dchi_error TYPE=gf CENTERING={VVV} TAGS='checkpoint="no"' +{ + dxchi_error dychi_error dzchi_error +} "error of 1st derivs of test grid function" + +CCTK_REAL ddchi_error TYPE=gf CENTERING={VVV} TAGS='checkpoint="no"' +{ + dxxchi_error dxychi_error dxzchi_error dyychi_error dyzchi_error dzzchi_error +} "error of 2nd derivs of test grid function" + +CCTK_REAL chi_diss_error TYPE=gf CENTERING={VVV} TAGS='checkpoint="no"' "error in dissipation term" + +CCTK_REAL chi_upwind_error TYPE=gf CENTERING={VVV} TAGS='checkpoint="no"' "error in upwind term" + diff --git a/TestDerivs/param.ccl b/TestDerivs/param.ccl index 37f2d8706..76eed8edf 100644 --- a/TestDerivs/param.ccl +++ b/TestDerivs/param.ccl @@ -10,6 +10,7 @@ CCTK_INT deriv_order "Order of spatial finite differencing" STEERABLE=never 2 :: "Second order finite difference" 4 :: "Fourth order finite difference" 6 :: "Sixth order finite difference" + 8 :: "Eighth order finite difference" } 4 CCTK_REAL kxx "par for polynomial" diff --git a/TestDerivs/schedule.ccl b/TestDerivs/schedule.ccl index 1d583f928..a459bf4c7 100644 --- a/TestDerivs/schedule.ccl +++ b/TestDerivs/schedule.ccl @@ -14,7 +14,8 @@ SCHEDULE TestDerivs_Set AT initial { LANG: C WRITES: chi(interior) - SYNC: chi + WRITES: beta(interior) + SYNC: chi beta } "Set up test data" SCHEDULE TestDerivs_Sync AT postregrid @@ -27,7 +28,15 @@ SCHEDULE TestDerivs_Sync AT postregrid SCHEDULE TestDerivs_CalcDerivs AT poststep { LANG: C - READS: chi(everywhere) - WRITES: dchi(interior) ddchi(interior) - SYNC: dchi ddchi + READS: chi(everywhere) beta(interior) + WRITES: dchi(interior) ddchi(interior) chi_diss(interior) chi_upwind(interior) + SYNC: dchi ddchi chi_diss chi_upwind } "Calculate derivs" + +SCHEDULE TestDerivs_CalcError AT poststep AFTER TestDerivs_CalcDerivs +{ + LANG: C + READS: dchi(interior) ddchi(interior) chi_diss(interior) chi_upwind(interior) + WRITES: dchi_error(interior) ddchi_error(interior) chi_diss_error(interior) chi_upwind_error(interior) + SYNC: dchi_error ddchi_error chi_diss_error chi_upwind_error +} "Calculate derivs error" diff --git a/TestDerivs/src/test.cxx b/TestDerivs/src/test.cxx index 9a84b5bf4..d919800b9 100644 --- a/TestDerivs/src/test.cxx +++ b/TestDerivs/src/test.cxx @@ -1,10 +1,10 @@ #include #include +#include #include #include #include -#include #include #include @@ -12,12 +12,80 @@ namespace TestDerivs { using namespace Loop; -using namespace std; template -constexpr void poly(const T kxx, const T kxy, const T kyz, const VT x, - const T y, const T z, VT &u) { - u = kxx * x * x + kxy * x * y + kyz * y * z; +constexpr VT poly(const T kxx, const T kxy, const T kyz, const VT x, const T y, + const T z) { + return kxx * x * x + kxy * x * y + kyz * y * z; +} + +template +constexpr void poly_derivs(const T kxx, const T kxy, const T kyz, const T x, + const T y, const T z, Arith::vec &du, + Arith::smat &ddu) { + using std::sin, std::cos, std::sqrt; + const T sinx = sin(x); + const T siny = sin(y); + const T sinz = sin(z); + const T cosx = cos(x); + const T cosy = cos(y); + const T cosz = cos(z); + du(0) = -2 * kxx * cosx * sinx - kxy * sinx * siny; + du(1) = kxy * cosx * cosy + kyz * cosy * sinz; + du(2) = kyz * cosz * siny; + ddu(0, 0) = + -2 * kxx * cosx * cosx + 2 * kxx * sinx * sinx - kxy * cosx * siny; + ddu(0, 1) = -kxy * cosy * sinx; + ddu(0, 2) = 0.0; + ddu(1, 1) = -kxy * cosx * siny - kyz * siny * sinz; + ddu(1, 2) = kyz * cosy * cosz; + ddu(2, 2) = -kyz * siny * sinz; +} + +template +constexpr Arith::vec beta_profile(const T x, const T y, const T z) { + const T vx = 1 * sin(x); + const T vy = 2 * sin(y); + const T vz = 3 * sin(z); + const T norm = sqrt(vx * vx + vy * vy + vz * vz); + return Arith::vec({vx / norm, vy / norm, vy / norm}); +} + +template +constexpr T poly_diss(const T kxx, const T kxy, const T kyz, const T x, + const T y, const T z, const int diss_order, + const Arith::vect &dx) { + using std::sin, std::cos, std::fabs; + const T sinx = sin(x); + const T siny = sin(y); + const T sinz = sin(z); + const T cosx = cos(x); + int coeff = 0; + + switch (diss_order) { + case 4: + coeff = 8; + break; + case 6: + coeff = -32; + break; + case 8: + coeff = 128; + break; + case 10: + coeff = -512; + break; + default: + assert(0); + } + + const int abc = fabs(coeff); + const int sig = (abc == coeff) ? 1 : -1; + return sig * ((abc * kxx * cosx * cosx - abc * kxx * sinx * sinx + + kxy * cosx * siny) / + dx[0] + + (kxy * cosx * siny + kyz * siny * sinz) / dx[1] + + (kyz * siny * sinz) / dx[2]); } extern "C" void TestDerivs_SetError(CCTK_ARGUMENTS) { @@ -38,6 +106,7 @@ extern "C" void TestDerivs_Set(CCTK_ARGUMENTS) { DECLARE_CCTK_ARGUMENTSX_TestDerivs_Set; DECLARE_CCTK_PARAMETERS; + using std::sin; using vreal = Arith::simd; using vbool = Arith::simdl; constexpr std::size_t vsize = std::tuple_size_v; @@ -49,17 +118,21 @@ extern "C" void TestDerivs_Set(CCTK_ARGUMENTS) { const vreal x0 = p.x + Arith::iota() * p.dx; const CCTK_REAL y0 = p.y; const CCTK_REAL z0 = p.z; - vreal u0; - using std::sin, std::cos; - poly(kxx, kxy, kyz, cos(x0), sin(y0), sin(z0), u0); + chi.store(mask, p.I, poly(kxx, kxy, kyz, cos(x0), sin(y0), sin(z0))); + }); - chi.store(mask, p.I, u0); + grid.loop_int_device<0, 0, 0>( + grid.nghostzones, + [=] CCTK_DEVICE(const PointDesc &p) CCTK_ATTRIBUTE_ALWAYS_INLINE { + const Arith::vec betas = beta_profile(p.x, p.y, p.z); + betax(p.I) = betas(0); + betay(p.I) = betas(1); + betaz(p.I) = betas(2); }); } extern "C" void TestDerivs_Sync(CCTK_ARGUMENTS) { DECLARE_CCTK_ARGUMENTSX_TestDerivs_Sync; - // do nothing } @@ -67,17 +140,14 @@ extern "C" void TestDerivs_CalcDerivs(CCTK_ARGUMENTS) { DECLARE_CCTK_ARGUMENTS_TestDerivs_CalcDerivs; DECLARE_CCTK_PARAMETERS; - using Arith::vect, Arith::vec, Arith::smat; - - const array indextype = {0, 0, 0}; - const array nghostzones = {cctk_nghostzones[0], cctk_nghostzones[1], - cctk_nghostzones[2]}; - vect imin, imax; + const std::array indextype = {0, 0, 0}; + const std::array nghostzones = { + cctk_nghostzones[0], cctk_nghostzones[1], cctk_nghostzones[2]}; + Arith::vect imin, imax; GridDescBase(cctkGH).box_int<0, 0, 0>(nghostzones, imin, imax); - // Suffix 1: with ghost zones, suffix 0: without ghost zones + // Suffix 2: with ghost zones, suffix 5: without ghost zones const GF3D2layout layout2(cctkGH, indextype); const GF3D5layout layout5(imin, imax); - const GF3D2 gf2_chi(layout2, chi); /* Define temp tail vars */ @@ -87,20 +157,22 @@ extern "C" void TestDerivs_CalcDerivs(CCTK_ARGUMENTS) { int ivar = 0; const auto make_gf = [&]() { return GF3D5(vars(ivar++)); }; const auto make_vec = [&](const auto &f) { - return vec, dim>([&](int) { return f(); }); + return Arith::vec, dim>( + [&](int) { return f(); }); }; const auto make_mat = [&](const auto &f) { - return smat, dim>([&](int, int) { return f(); }); + return Arith::smat, dim>( + [&](int, int) { return f(); }); }; const auto make_vec_gf = [&]() { return make_vec(make_gf); }; const auto make_mat_gf = [&]() { return make_mat(make_gf); }; const GF3D5 t5_chi(make_gf()); - const vec, dim> t5_dchi(make_vec_gf()); - const smat, dim> t5_ddchi(make_mat_gf()); + const Arith::vec, dim> t5_dchi(make_vec_gf()); + const Arith::smat, dim> t5_ddchi(make_mat_gf()); const GridDescBaseDevice grid(cctkGH); - const vect dx(std::array{ + const Arith::vect dx(std::array{ CCTK_DELTA_SPACE(0), CCTK_DELTA_SPACE(1), CCTK_DELTA_SPACE(2), @@ -110,59 +182,125 @@ extern "C" void TestDerivs_CalcDerivs(CCTK_ARGUMENTS) { gf2_chi, dx, deriv_order); ivar = -1; - const vec, dim> gf_dchi{GF3D2(layout2, dxchi), - GF3D2(layout2, dychi), - GF3D2(layout2, dzchi)}; - const smat, dim> gf_ddchi{ + const Arith::vec, dim> gf_dchi{ + GF3D2(layout2, dxchi), GF3D2(layout2, dychi), + GF3D2(layout2, dzchi)}; + const Arith::smat, dim> gf_ddchi{ GF3D2(layout2, dxxchi), GF3D2(layout2, dxychi), GF3D2(layout2, dxzchi), GF3D2(layout2, dyychi), GF3D2(layout2, dyzchi), GF3D2(layout2, dzzchi)}; + const GF3D2 gf_chi_diss(layout2, chi_diss); + + const Arith::vec, 3> gf_beta{ + GF3D2(layout2, betax), + GF3D2(layout2, betay), + GF3D2(layout2, betaz)}; + const GF3D2 gf_chi_upwind(layout2, chi_upwind); typedef Arith::simd vreal; typedef Arith::simdl vbool; - constexpr size_t vsize = tuple_size_v; - grid.loop_int_device<0, 0, 0, vsize>( - grid.nghostzones, [=] ARITH_DEVICE(const PointDesc &p) ARITH_INLINE { - const vbool mask = Arith::mask_for_loop_tail(p.i, p.imax); - const GF3D2index index2(layout2, p.I); - const GF3D5index index5(layout5, p.I); + constexpr size_t vsize = std::tuple_size_v; - gf_dchi.store(mask, index2, t5_dchi(mask, index5)); - gf_ddchi.store(mask, index2, t5_ddchi(mask, index5)); - }); + switch (deriv_order) { + case 2: { + grid.loop_int_device<0, 0, 0, vsize>( + grid.nghostzones, [=] ARITH_DEVICE(const PointDesc &p) ARITH_INLINE { + const vbool mask = Arith::mask_for_loop_tail(p.i, p.imax); + const GF3D2index index2(layout2, p.I); + const GF3D5index index5(layout5, p.I); + gf_dchi.store(mask, index2, t5_dchi(mask, index5)); + gf_ddchi.store(mask, index2, t5_ddchi(mask, index5)); + gf_chi_diss.store(mask, index2, + Derivs::calc_diss<2>(gf2_chi, mask, p.I, dx)); + gf_chi_upwind.store( + mask, index2, + Derivs::calc_deriv_upwind<2>(gf2_chi, mask, p.I, dx, + gf_beta(mask, index2))); + }); + break; + } + case 4: { + grid.loop_int_device<0, 0, 0, vsize>( + grid.nghostzones, [=] ARITH_DEVICE(const PointDesc &p) ARITH_INLINE { + const vbool mask = Arith::mask_for_loop_tail(p.i, p.imax); + const GF3D2index index2(layout2, p.I); + const GF3D5index index5(layout5, p.I); + gf_dchi.store(mask, index2, t5_dchi(mask, index5)); + gf_ddchi.store(mask, index2, t5_ddchi(mask, index5)); + gf_chi_diss.store(mask, index2, + Derivs::calc_diss<4>(gf2_chi, mask, p.I, dx)); + gf_chi_upwind.store( + mask, index2, + Derivs::calc_deriv_upwind<4>(gf2_chi, mask, p.I, dx, + gf_beta(mask, index2))); + }); + break; + } + case 6: { + grid.loop_int_device<0, 0, 0, vsize>( + grid.nghostzones, [=] ARITH_DEVICE(const PointDesc &p) ARITH_INLINE { + const vbool mask = Arith::mask_for_loop_tail(p.i, p.imax); + const GF3D2index index2(layout2, p.I); + const GF3D5index index5(layout5, p.I); + gf_dchi.store(mask, index2, t5_dchi(mask, index5)); + gf_ddchi.store(mask, index2, t5_ddchi(mask, index5)); + gf_chi_diss.store(mask, index2, + Derivs::calc_diss<6>(gf2_chi, mask, p.I, dx)); + gf_chi_upwind.store( + mask, index2, + Derivs::calc_deriv_upwind<6>(gf2_chi, mask, p.I, dx, + gf_beta(mask, index2))); + }); + break; + } + case 8: { + grid.loop_int_device<0, 0, 0, vsize>( + grid.nghostzones, [=] ARITH_DEVICE(const PointDesc &p) ARITH_INLINE { + const vbool mask = Arith::mask_for_loop_tail(p.i, p.imax); + const GF3D2index index2(layout2, p.I); + const GF3D5index index5(layout5, p.I); + gf_dchi.store(mask, index2, t5_dchi(mask, index5)); + gf_ddchi.store(mask, index2, t5_ddchi(mask, index5)); + gf_chi_diss.store(mask, index2, + Derivs::calc_diss<8>(gf2_chi, mask, p.I, dx)); + gf_chi_upwind.store( + mask, index2, + Derivs::calc_deriv_upwind<8>(gf2_chi, mask, p.I, dx, + gf_beta(mask, index2))); + }); + break; + } + default: + assert(0); + } #if CCTK_DEBUG grid.loop_int_device<0, 0, 0>( grid.nghostzones, [=] ARITH_DEVICE(const PointDesc &p) ARITH_INLINE { - using std::cos, std::sin; - const auto sinx = sin(p.x); - const auto siny = sin(p.y); - const auto sinz = sin(p.z); - const auto cosx = cos(p.x); - const auto cosy = cos(p.y); - const auto cosz = cos(p.z); - const auto dxxdchi = - -2 * kxx * cosx * cosx + 2 * kxx * sinx * sinx - kxy * cosx * siny; - const auto dxydchi = -kxy * cosy * sinx; - const auto dxzdchi = 0.0; - const auto dyydchi = -kxy * cosx * siny - kyz * siny * sinz; - const auto dyzdchi = kyz * cosy * cosz; - const auto dzzdchi = -kyz * siny * sinz; + Arith::vec dchi; + Arith::smat ddchi; + poly_derivs(kxx, kxy, kyz, p.x, p.y, p.z, dchi, ddchi); const auto tiny = 5e-3; - if (dxxdchi - gf_ddchi(0, 0)(p.I) > tiny || - dxydchi - gf_ddchi(0, 1)(p.I) > tiny || - dxzdchi - gf_ddchi(0, 2)(p.I) > tiny || - dyydchi - gf_ddchi(1, 1)(p.I) > tiny || - dyzdchi - gf_ddchi(1, 2)(p.I) > tiny || - dzzdchi - gf_ddchi(2, 2)(p.I) > tiny) { + if (dchi(0) - gf_dchi(0)(p.I) > tiny || + dchi(1) - gf_dchi(1)(p.I) > tiny || + dchi(2) - gf_dchi(2)(p.I) > tiny || + ddchi(0, 0) - gf_ddchi(0, 0)(p.I) > tiny || + ddchi(0, 1) - gf_ddchi(0, 1)(p.I) > tiny || + ddchi(0, 2) - gf_ddchi(0, 2)(p.I) > tiny || + ddchi(1, 1) - gf_ddchi(1, 1)(p.I) > tiny || + ddchi(1, 2) - gf_ddchi(1, 2)(p.I) > tiny || + ddchi(2, 2) - gf_ddchi(2, 2)(p.I) > tiny) { #ifndef SYCL_LANGUAGE_VERSION - printf("ddxx = %f\n", dxxdchi - gf_ddchi(0, 0)(p.I)); - printf("ddxy = %f\n", dxydchi - gf_ddchi(0, 1)(p.I)); - printf("ddxz = %f\n", dxzdchi - gf_ddchi(0, 2)(p.I)); - printf("ddyy = %f\n", dyydchi - gf_ddchi(1, 1)(p.I)); - printf("ddyz = %f\n", dyzdchi - gf_ddchi(1, 2)(p.I)); - printf("ddzz = %f\n", dzzdchi - gf_ddchi(2, 2)(p.I)); + printf("dx = %f\n", dchi(0) - gf_dchi(0)(p.I)); + printf("dy = %f\n", dchi(1) - gf_dchi(1)(p.I)); + printf("dz = %f\n", dchi(2) - gf_dchi(2)(p.I)); + printf("ddxx = %f\n", ddchi(0, 0) - gf_ddchi(0, 0)(p.I)); + printf("ddxy = %f\n", ddchi(0, 1) - gf_ddchi(0, 1)(p.I)); + printf("ddxz = %f\n", ddchi(0, 2) - gf_ddchi(0, 2)(p.I)); + printf("ddyy = %f\n", ddchi(1, 1) - gf_ddchi(1, 1)(p.I)); + printf("ddyz = %f\n", ddchi(1, 2) - gf_ddchi(1, 2)(p.I)); + printf("ddzz = %f\n", ddchi(2, 2) - gf_ddchi(2, 2)(p.I)); #endif assert(0); } @@ -170,4 +308,43 @@ extern "C" void TestDerivs_CalcDerivs(CCTK_ARGUMENTS) { #endif } +extern "C" void TestDerivs_CalcError(CCTK_ARGUMENTS) { + DECLARE_CCTK_ARGUMENTSX_TestDerivs_CalcError; + DECLARE_CCTK_PARAMETERS; + + const Arith::vect dx(std::array{ + CCTK_DELTA_SPACE(0), + CCTK_DELTA_SPACE(1), + CCTK_DELTA_SPACE(2), + }); + + grid.loop_int_device<0, 0, 0>( + grid.nghostzones, [=] ARITH_DEVICE(const PointDesc &p) ARITH_INLINE { + Arith::vec dchi; + Arith::smat ddchi; + poly_derivs(kxx, kxy, kyz, p.x, p.y, p.z, dchi, ddchi); + + dxchi_error(p.I) = dxchi(p.I) - dchi(0); + dychi_error(p.I) = dychi(p.I) - dchi(1); + dzchi_error(p.I) = dzchi(p.I) - dchi(2); + dxxchi_error(p.I) = dxxchi(p.I) - ddchi(0, 0); + dxychi_error(p.I) = dxychi(p.I) - ddchi(0, 1); + dxzchi_error(p.I) = dxzchi(p.I) - ddchi(0, 2); + dyychi_error(p.I) = dyychi(p.I) - ddchi(1, 1); + dyzchi_error(p.I) = dyzchi(p.I) - ddchi(1, 2); + dzzchi_error(p.I) = dzzchi(p.I) - ddchi(2, 2); + + const int diss_order = deriv_order + 2; + const CCTK_REAL diss = + Arith::pown(-1, diss_order / 2 - 1) / Arith::pown(2, diss_order) * + poly_diss(kxx, kxy, kyz, p.x, p.y, p.z, diss_order, dx); + chi_diss_error(p.I) = diss - chi_diss(p.I); + + const Arith::vec betas = beta_profile(p.x, p.y, p.z); + const CCTK_REAL upwind = Arith::sum( + [&](int i) ARITH_INLINE { return betas(i) * dchi(i); }); + chi_upwind_error(p.I) = upwind - chi_upwind(p.I); + }); +} + } // namespace TestDerivs diff --git a/TestDerivs/test/derivs-2nd-order.par b/TestDerivs/test/derivs-2nd-order.par index 8e2a4822b..4585fc9e4 100644 --- a/TestDerivs/test/derivs-2nd-order.par +++ b/TestDerivs/test/derivs-2nd-order.par @@ -46,7 +46,7 @@ CarpetX::dtfac = 0.5 CarpetX::prolongation_type = "ddf" CarpetX::prolongation_order = 3 -CarpetX::ghost_size = 1 +CarpetX::ghost_size = 2 # 1 extra for diss operator TestDerivs::deriv_order = 2 TestDerivs::kxx = 1.0 @@ -60,7 +60,8 @@ IO::out_every = 1 CarpetX::out_metadata = "no" CarpetX::out_tsv_vars = " - TestDerivs::chi - TestDerivs::dchi - TestDerivs::ddchi + TestDerivs::dchi_error + TestDerivs::ddchi_error + TestDerivs::chi_diss_error + TestDerivs::chi_upwind_error " diff --git a/TestDerivs/test/derivs-2nd-order/testderivs-chi.it000000.x.tsv b/TestDerivs/test/derivs-2nd-order/testderivs-chi.it000000.x.tsv deleted file mode 100644 index 32bcab90c..000000000 --- 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7.6455792047863913e-01 2.9123394139229014e-02 2.7225332473744871e-04 -8.2619877467704638e-16 1.5517364612039220e-04 -1.0487430354600412e-02 6.3483539559189240e-05 diff --git a/TestDerivs/test/derivs-4th-order.par b/TestDerivs/test/derivs-4th-order.par index efb67cf0f..b60e4b717 100644 --- a/TestDerivs/test/derivs-4th-order.par +++ b/TestDerivs/test/derivs-4th-order.par @@ -46,7 +46,7 @@ CarpetX::dtfac = 0.5 CarpetX::prolongation_type = "ddf" CarpetX::prolongation_order = 5 -CarpetX::ghost_size = 2 +CarpetX::ghost_size = 3 # 1 extra for diss operator TestDerivs::deriv_order = 4 TestDerivs::kxx = 1.0 @@ -60,7 +60,8 @@ IO::out_every = 1 CarpetX::out_metadata = "no" CarpetX::out_tsv_vars = " - TestDerivs::chi - TestDerivs::dchi - TestDerivs::ddchi + TestDerivs::dchi_error + TestDerivs::ddchi_error + TestDerivs::chi_diss_error + TestDerivs::chi_upwind_error " diff --git a/TestDerivs/test/derivs-4th-order/testderivs-chi.it000000.x.tsv 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CarpetX::prolongation_order = 7 -CarpetX::ghost_size = 3 +CarpetX::ghost_size = 4 # 1 extra for diss operator TestDerivs::deriv_order = 6 TestDerivs::kxx = 1.0 @@ -60,7 +60,8 @@ IO::out_every = 1 CarpetX::out_metadata = "no" CarpetX::out_tsv_vars = " - TestDerivs::chi - TestDerivs::dchi - TestDerivs::ddchi + TestDerivs::dchi_error + TestDerivs::ddchi_error + TestDerivs::chi_diss_error + TestDerivs::chi_upwind_error " diff --git a/TestDerivs/test/derivs-6th-order/testderivs-chi.it000000.x.tsv b/TestDerivs/test/derivs-6th-order/testderivs-chi.it000000.x.tsv deleted file mode 100644 index 19570e89f..000000000 --- a/TestDerivs/test/derivs-6th-order/testderivs-chi.it000000.x.tsv +++ /dev/null @@ -1,55 +0,0 @@ -# 1:iteration 2:time 3:patch 4:level 5:i 6:j 7:k 8:x 9:y 10:z 11:chi -0 0.0000000000000000e+00 0 0 -3 14 13 -3.6464544843077515e+00 2.5128289760679934e-02 -7.3200120478638997e-02 7.4221879559274717e-01 -0 0.0000000000000000e+00 0 0 -2 14 13 -3.4370149740684321e+00 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1.8736944880340292e-02 2.5128289760680100e-02 8.6927767559829894e-01 2.0668811937420444e-05 2.4559589436423106e-08 -3.6599386885233299e-08 7.2036717094620147e-09 -8.5860071407380650e-07 4.0775686908320396e-09 +0 0.0000000000000000e+00 0 1 29 28 36 1.8736944880340292e-02 2.5128289760680100e-02 9.7399743071795863e-01 1.8763137039359335e-05 2.2391608399752892e-08 -4.3610354671294231e-16 6.8714437445645672e-09 -6.7165513195914891e-07 3.1109802799160539e-09 diff --git a/TestDerivs/test/derivs-8th-order.par b/TestDerivs/test/derivs-8th-order.par new file mode 100644 index 000000000..edd762926 --- /dev/null +++ b/TestDerivs/test/derivs-8th-order.par @@ -0,0 +1,67 @@ +ActiveThorns = " + CarpetX + IOUtil + TestDerivs +" + +$nlevels = 2 +$ncells = 30 +$blocking_factor = 2 + +Cactus::cctk_show_schedule = "no" +Cactus::presync_mode = "mixed-error" +#Cactus::cctk_full_warnings = "yes" + +Cactus::cctk_itlast = 0 + +CarpetX::verbose = "no" +CarpetX::poison_undefined_values = "yes" + +$pi = 3.1415926535897932385 +CarpetX::xmin = 0.1234567-$pi +CarpetX::ymin = 0.2345678-$pi +CarpetX::zmin = 0.3456789-$pi +CarpetX::xmax = 0.1234567+$pi +CarpetX::ymax = 0.2345678+$pi +CarpetX::zmax = 0.3456789+$pi + +Driver::periodic = "yes" +Driver::periodic_x = "yes" +Driver::periodic_y = "yes" +Driver::periodic_z = "yes" + +CarpetX::ncells_x = $ncells +CarpetX::ncells_y = $ncells +CarpetX::ncells_z = $ncells + +CarpetX::blocking_factor_x = $blocking_factor +CarpetX::blocking_factor_y = $blocking_factor +CarpetX::blocking_factor_z = $blocking_factor + +CarpetX::max_num_levels = $nlevels +CarpetX::regrid_every = 1 +Driver::regrid_error_threshold = 0.01 + +CarpetX::dtfac = 0.5 + +CarpetX::prolongation_type = "ddf" +CarpetX::prolongation_order = 7 +CarpetX::ghost_size = 5 # 1 extra for diss operator + +TestDerivs::deriv_order = 8 +TestDerivs::kxx = 1.0 +TestDerivs::kxy = 1.0 +TestDerivs::kyz = 1.0 + +IO::out_dir = $parfile +IO::out_fileinfo = "none" +IO::parfile_write = "no" +IO::out_every = 1 + +CarpetX::out_metadata = "no" +CarpetX::out_tsv_vars = " + TestDerivs::dchi_error + TestDerivs::ddchi_error + TestDerivs::chi_diss_error + TestDerivs::chi_upwind_error +" diff --git a/TestDerivs/test/derivs-8th-order/testderivs-chi_diss_error.it000000.x.tsv b/TestDerivs/test/derivs-8th-order/testderivs-chi_diss_error.it000000.x.tsv new file mode 100644 index 000000000..d5aecb312 --- /dev/null +++ b/TestDerivs/test/derivs-8th-order/testderivs-chi_diss_error.it000000.x.tsv @@ -0,0 +1,63 @@ +# 1:iteration 2:time 3:patch 4:level 5:i 6:j 7:k 8:x 9:y 10:z 11:chi_diss_error +0 0.0000000000000000e+00 0 0 -5 14 13 -4.0653335047863903e+00 2.5128289760680100e-02 -7.3200120478638969e-02 -9.8456113803609120e-08 +0 0.0000000000000000e+00 0 0 -4 14 13 -3.8558939945470709e+00 2.5128289760680100e-02 -7.3200120478638969e-02 5.1033198535627704e-08 +0 0.0000000000000000e+00 0 0 -3 14 13 -3.6464544843077515e+00 2.5128289760680100e-02 -7.3200120478638969e-02 1.9169428566507534e-07 +0 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2.0608927523325442e-09 1.0988726212308160e-09 +0 0.0000000000000000e+00 0 1 29 28 36 1.8736944880340292e-02 2.5128289760680100e-02 9.7399743071795863e-01 5.7786998292881457e-07 2.1752372436817772e-10 2.0693255259393172e-20 5.3418765379409329e-11 -6.5246846288327253e-09 2.4193657710905314e-11 +0 0.0000000000000000e+00 0 1 29 28 37 1.8736944880340292e-02 2.5128289760680100e-02 1.0787171858376186e+00 5.4488972916923398e-07 2.1347220008804489e-10 8.7232920715742396e-09 5.4025964181757678e-11 -7.3868127109294995e-09 -1.8988994430844611e-10 diff --git a/docker/carpetx-arm64v8-cpu.dockerfile b/docker/carpetx-arm64v8-cpu.dockerfile index 271819077..5db7fd265 100644 --- a/docker/carpetx-arm64v8-cpu.dockerfile +++ b/docker/carpetx-arm64v8-cpu.dockerfile @@ -7,9 +7,8 @@ # docker push einsteintoolkit/carpetx:arm64v8-cpu-real32 # noble is ubuntu:24.04 -# FROM arm64v8/ubuntu:noble-20240801 -# FROM arm64v8/ubuntu:noble-20240904.1 -FROM arm64v8/ubuntu:noble-20241011 +# FROM arm64v8/ubuntu:noble-20241015 +FROM arm64v8/ubuntu:noble-20241118.1 ENV DEBIAN_FRONTEND=noninteractive \ LANGUAGE=en_US.en \ @@ -29,6 +28,7 @@ RUN apt-get update && \ ca-certificates \ clang-format \ cmake \ + curl \ cvs \ diffutils \ elfutils \ @@ -37,6 +37,7 @@ RUN apt-get update && \ gdb \ gfortran \ git \ + hdf5-filter-plugin-zfp-serial \ hdf5-tools \ hwloc-nox \ language-pack-en \ @@ -59,6 +60,7 @@ RUN apt-get update && \ libtool \ libudev-dev \ libyaml-cpp-dev \ + libzfp-dev \ libzstd-dev \ locales \ m4 \ @@ -90,9 +92,9 @@ RUN apt-get update && \ # Try to reuse build tools from Ubuntu, but do not use any libraries because HPC Toolkit is a bit iffy to install. RUN mkdir src && \ (cd src && \ - wget https://github.com/spack/spack/archive/refs/tags/v0.22.2.tar.gz && \ - tar xzf v0.22.2.tar.gz && \ - export SPACK_ROOT="$(pwd)/spack-0.22.2" && \ + wget https://github.com/spack/spack/archive/refs/tags/v0.23.0.tar.gz && \ + tar xzf v0.23.0.tar.gz && \ + export SPACK_ROOT="$(pwd)/spack-0.23.0" && \ mkdir -p "${HOME}/.spack" && \ echo 'config: {install_tree: {root: /spack}}' >"${HOME}/.spack/config.yaml" && \ . ${SPACK_ROOT}/share/spack/setup-env.sh && \ @@ -100,6 +102,7 @@ RUN mkdir src && \ autoconf \ automake \ cmake \ + curl \ diffutils \ elfutils \ gmake \ @@ -121,9 +124,9 @@ RUN mkdir src && \ # blosc2 is a compression library, comparable to zlib RUN mkdir src && \ (cd src && \ - wget https://github.com/Blosc/c-blosc2/archive/refs/tags/v2.15.1.tar.gz && \ - tar xzf v2.15.1.tar.gz && \ - cd c-blosc2-2.15.1 && \ + wget https://github.com/Blosc/c-blosc2/archive/refs/tags/v2.15.2.tar.gz && \ + tar xzf v2.15.2.tar.gz && \ + cd c-blosc2-2.15.2 && \ cmake -B build -G Ninja \ -DCMAKE_BUILD_TYPE=RelWithDebInfo \ -DCMAKE_INSTALL_PREFIX=/usr/local \ @@ -174,9 +177,12 @@ RUN mkdir src && \ -DBUILD_TESTING=OFF \ -DADIOS2_BUILD_EXAMPLES=OFF \ -DADIOS2_Blosc2_PREFER_SHARED=ON \ + -DADIOS2_USE_BZip2=ON \ -DADIOS2_USE_Blosc2=ON \ -DADIOS2_USE_Fortran=OFF \ + -DADIOS2_USE_HDF5=ON \ -DADIOS2_USE_MGARD=ON \ + -DADIOS2_USE_ZFP=ON \ && \ cmake --build build && \ cmake --install build && \ @@ -219,6 +225,8 @@ RUN mkdir src && \ true) && \ rm -rf src +COPY patches/openPMD-api.patch /cactus/patches/ + # Install openPMD-api # openPMD-api defines a standard for laying out AMR data in a file # - depends on ADIOS2 @@ -227,6 +235,8 @@ RUN mkdir src && \ wget https://github.com/openPMD/openPMD-api/archive/refs/tags/0.16.0.tar.gz && \ tar xzf 0.16.0.tar.gz && \ cd openPMD-api-0.16.0 && \ + patch -p1 "${HOME}/.spack/config.yaml" && \ . ${SPACK_ROOT}/share/spack/setup-env.sh && \ @@ -100,6 +102,7 @@ RUN mkdir src && \ autoconf \ automake \ cmake \ + curl \ diffutils \ elfutils \ gmake \ @@ -121,9 +124,9 @@ RUN mkdir src && \ # blosc2 is a compression library, comparable to zlib RUN mkdir src && \ (cd src && \ - wget https://github.com/Blosc/c-blosc2/archive/refs/tags/v2.15.1.tar.gz && \ - tar xzf v2.15.1.tar.gz && \ - cd c-blosc2-2.15.1 && \ + wget https://github.com/Blosc/c-blosc2/archive/refs/tags/v2.15.2.tar.gz && \ + tar xzf v2.15.2.tar.gz && \ + cd c-blosc2-2.15.2 && \ cmake -B build -G Ninja \ -DCMAKE_BUILD_TYPE=RelWithDebInfo \ -DCMAKE_INSTALL_PREFIX=/usr/local \ @@ -174,9 +177,12 @@ RUN mkdir src && \ -DBUILD_TESTING=OFF \ -DADIOS2_BUILD_EXAMPLES=OFF \ -DADIOS2_Blosc2_PREFER_SHARED=ON \ + -DADIOS2_USE_BZip2=ON \ -DADIOS2_USE_Blosc2=ON \ -DADIOS2_USE_Fortran=OFF \ + -DADIOS2_USE_HDF5=ON \ -DADIOS2_USE_MGARD=ON \ + -DADIOS2_USE_ZFP=ON \ && \ cmake --build build && \ cmake --install build && \ @@ -219,6 +225,8 @@ RUN mkdir src && \ true) && \ rm -rf src +COPY patches/openPMD-api.patch /cactus/patches/ + # Install openPMD-api # openPMD-api defines a standard for laying out AMR data in a file # - depends on ADIOS2 @@ -227,6 +235,8 @@ RUN mkdir src && \ wget https://github.com/openPMD/openPMD-api/archive/refs/tags/0.16.0.tar.gz && \ tar xzf 0.16.0.tar.gz && \ cd openPMD-api-0.16.0 && \ + patch -p1 "${HOME}/.spack/config.yaml" && \ # . ${SPACK_ROOT}/share/spack/setup-env.sh && \ @@ -109,9 +110,9 @@ RUN apt-get update && \ # blosc2 is a compression library, comparable to zlib RUN mkdir src && \ (cd src && \ - wget https://github.com/Blosc/c-blosc2/archive/refs/tags/v2.15.1.tar.gz && \ - tar xzf v2.15.1.tar.gz && \ - cd c-blosc2-2.15.1 && \ + wget https://github.com/Blosc/c-blosc2/archive/refs/tags/v2.15.2.tar.gz && \ + tar xzf v2.15.2.tar.gz && \ + cd c-blosc2-2.15.2 && \ cmake -B build -G Ninja \ -DCMAKE_BUILD_TYPE=RelWithDebInfo \ -DCMAKE_INSTALL_PREFIX=/usr/local \ @@ -163,9 +164,12 @@ RUN mkdir src && \ -DBUILD_TESTING=OFF \ -DADIOS2_BUILD_EXAMPLES=OFF \ -DADIOS2_Blosc2_PREFER_SHARED=ON \ + -DADIOS2_USE_BZip2=ON \ -DADIOS2_USE_Blosc2=ON \ -DADIOS2_USE_Fortran=OFF \ + -DADIOS2_USE_HDF5=ON \ -DADIOS2_USE_MGARD=ON \ + -DADIOS2_USE_ZFP=ON \ && \ cmake --build build && \ cmake --install build && \ @@ -208,6 +212,8 @@ RUN mkdir src && \ true) && \ rm -rf src +COPY patches/openPMD-api.patch /cactus/patches/ + # Install openPMD-api # openPMD-api defines a standard for laying out AMR data in a file # - depends on ADIOS2 @@ -216,6 +222,8 @@ RUN mkdir src && \ wget https://github.com/openPMD/openPMD-api/archive/refs/tags/0.16.0.tar.gz && \ tar xzf 0.16.0.tar.gz && \ cd openPMD-api-0.16.0 && \ + patch -p1 "${HOME}/.spack/config.yaml" && \ # . ${SPACK_ROOT}/share/spack/setup-env.sh && \ @@ -112,9 +114,9 @@ RUN apt-get update && \ # blosc2 is a compression library, comparable to zlib RUN mkdir src && \ (cd src && \ - wget https://github.com/Blosc/c-blosc2/archive/refs/tags/v2.15.1.tar.gz && \ - tar xzf v2.15.1.tar.gz && \ - cd c-blosc2-2.15.1 && \ + wget https://github.com/Blosc/c-blosc2/archive/refs/tags/v2.15.2.tar.gz && \ + tar xzf v2.15.2.tar.gz && \ + cd c-blosc2-2.15.2 && \ cmake -B build -G Ninja \ -DCMAKE_BUILD_TYPE=RelWithDebInfo \ -DCMAKE_INSTALL_PREFIX=/usr/local \ @@ -166,9 +168,12 @@ RUN mkdir src && \ -DBUILD_TESTING=OFF \ -DADIOS2_BUILD_EXAMPLES=OFF \ -DADIOS2_Blosc2_PREFER_SHARED=ON \ + -DADIOS2_USE_BZip2=ON \ -DADIOS2_USE_Blosc2=ON \ -DADIOS2_USE_Fortran=OFF \ + -DADIOS2_USE_HDF5=ON \ -DADIOS2_USE_MGARD=ON \ + -DADIOS2_USE_ZFP=ON \ && \ cmake --build build && \ cmake --install build && \ @@ -211,6 +216,8 @@ RUN mkdir src && \ true) && \ rm -rf src +COPY patches/openPMD-api.patch /cactus/patches/ + # Install openPMD-api # openPMD-api defines a standard for laying out AMR data in a file # - depends on ADIOS2 @@ -219,6 +226,8 @@ RUN mkdir src && \ wget https://github.com/openPMD/openPMD-api/archive/refs/tags/0.16.0.tar.gz && \ tar xzf 0.16.0.tar.gz && \ cd openPMD-api-0.16.0 && \ + patch -p1