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Cas-16S-seq

Including the code and data files for Cas-16S-seq project.

Cas-16S-seq/gRNA-design/ code for design host specific gRNA for Cas-16S-seq, use rice as an example

Cas-16S-seq/otu-cluster/ code for OTU clustering, R script for processing 799F-1193R amplicon data (soil and root)

Cas-16S-seq/otu-cluster/chimera code for analyzing chimeras in root samples

Cas-16S-seq/515F-806R/ R code and raw data to process 515F-806R amplicon data

Cas-16S-seq/799F-1193R/ R code and raw data to process 799F-1193R amplicon data