From 25aecd131e8e8489ad6bb767d3ec57e156e952aa Mon Sep 17 00:00:00 2001 From: Chen Wang Date: Wed, 28 Aug 2024 16:35:33 -0400 Subject: [PATCH 1/3] Fix the functions for baseline characteristics table by subgroup and re-generate the tables --- R/rtf_base_char_subgroup.R | 6 +- vignettes/baseline-character.Rmd | 19 +- vignettes/outtable/base0char.rtf | 272 ++++++++----- vignettes/outtable/base0charsubgroup.rtf | 465 +++++++++++++++++++++++ 4 files changed, 658 insertions(+), 104 deletions(-) create mode 100644 vignettes/outtable/base0charsubgroup.rtf diff --git a/R/rtf_base_char_subgroup.R b/R/rtf_base_char_subgroup.R index f420eeb..3c7a0c0 100644 --- a/R/rtf_base_char_subgroup.R +++ b/R/rtf_base_char_subgroup.R @@ -68,10 +68,8 @@ rtf_base_char_subgroup <- function( #Add empty line before stats summary section tbl<- tbl |> dplyr::mutate(split = cumsum(ifelse(tolower(name) == outdata$display_stat[1], 1, 0))) |> - dplyr::group_by(split) |> - dplyr::group_modify(.f = ~dplyr::add_row(.data = ., - name = "", var_label= tbl[tolower(tbl$name) == outdata$display_stat[1],]$var_label)) - + dplyr::group_by(split) + tbl1 <- tbl[!names(tbl) %in% c("order","split")] tgroup <- outdata$group sgroup <- outdata$subgroup diff --git a/vignettes/baseline-character.Rmd b/vignettes/baseline-character.Rmd index 85536e6..2a5a40b 100644 --- a/vignettes/baseline-character.Rmd +++ b/vignettes/baseline-character.Rmd @@ -119,7 +119,7 @@ outdata$tbl outdata |> rtf_base_char( source = "Source: [CDISCpilot: adam-adsl]", path_outdata = tempfile(fileext = ".Rdata"), - path_outtable = "base_char.rtf" + path_outtable = "outtable/base0char.rtf" ) ``` @@ -205,7 +205,7 @@ raw datasets. Key arguments are: - `subgroup_var`: a character value of subgroup variable name in observation data saved in meta$data_observation. - `subgroup_header`: a character vector for column header hierarchy. The first element will be the first level header and the second element will be second level header. -```{r, eval = FALSE} +```{r} outdata <- prepare_base_char_subgroup( meta, population = "apat", @@ -218,7 +218,7 @@ outdata <- prepare_base_char_subgroup( The output dataset contains commonly used statistics within each `subgroup_var`. -```{r, eval = FALSE} +```{r} outdata$out_all$`Placebo` outdata$out_all$`High Dose` outdata$out_all$`Low Dose` @@ -226,14 +226,14 @@ outdata$out_all$`Low Dose` The information about subgroup saved with `outdata$group` and `outdata$subgroup`. -```{r, eval = FALSE} +```{r} outdata$group outdata$subgroup ``` `n_pop`: participants in population within each `subgroup_var`. -```{r, eval = FALSE} +```{r} outdata$out_all$`Placebo`$n outdata$out_all$`High Dose`$n outdata$out_all$`Low Dose`$n @@ -243,7 +243,7 @@ outdata$out_all$`Low Dose`$n `format_base_char_subgroup` to prepare analysis dataset before generate RTF output -```{r, eval = FALSE} +```{r} tbl <- format_base_char_subgroup(outdata) head(tbl$tbl) ``` @@ -252,12 +252,11 @@ head(tbl$tbl) `rtf_base_char_subgroup` to generate RTF output -```{r, warning=FALSE, eval = FALSE} -outdata |> - format_base_char_subgroup() |> +```{r, warning=FALSE} +outdata <- format_base_char_subgroup(outdata) |> rtf_base_char_subgroup( source = "Source: [CDISCpilot: adam-adsl]", path_outdata = tempfile(fileext = ".Rdata"), - path_outtable = "base_char_subgroup.rtf" + path_outtable = "outtable/base0charsubgroup.rtf" ) ``` \ No newline at end of file diff --git a/vignettes/outtable/base0char.rtf b/vignettes/outtable/base0char.rtf index 2a2941b..5eb3529 100644 --- a/vignettes/outtable/base0char.rtf +++ b/vignettes/outtable/base0char.rtf @@ -25,10 +25,10 @@ \clbrdrl\brdrs\brdrw15\clbrdrt\brdrdb\brdrw15\clbrdrb\brdrw15\clvertalb\cellx5000 \clbrdrl\brdrs\brdrw15\clbrdrt\brdrdb\brdrw15\clbrdrb\brdrw15\clvertalb\cellx7000 \clbrdrl\brdrs\brdrw15\clbrdrt\brdrdb\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrw15\clvertalb\cellx9000 -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 }\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 Placebo}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 High Dose}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 Low Dose}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 Placebo}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 Low Dose}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 High Dose}\cell \intbl\row\pard \trowd\trgaph108\trleft0\trqc \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalb\cellx3000 @@ -38,13 +38,13 @@ \clbrdrl\brdrw15\clbrdrt\brdrs\brdrw15\clbrdrb\brdrw15\clvertalb\cellx7000 \clbrdrl\brdrs\brdrw15\clbrdrt\brdrs\brdrw15\clbrdrb\brdrw15\clvertalb\cellx8000 \clbrdrl\brdrw15\clbrdrt\brdrs\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrw15\clvertalb\cellx9000 -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 }\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 n}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (%)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 n}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (%)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 n}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (%)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 n}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (%)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 n}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (%)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 n}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (%)}\cell \intbl\row\pard \trowd\trgaph108\trleft0\trqc \clbrdrl\brdrs\brdrw15\clbrdrt\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx3000 @@ -54,13 +54,49 @@ \clbrdrl\brdrw15\clbrdrt\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx7000 \clbrdrl\brdrs\brdrw15\clbrdrt\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx8000 \clbrdrl\brdrw15\clbrdrt\brdrs\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx9000 -\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs20{\f0 Age (years)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 86}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (1.00)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 84}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (1.00)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 84}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (1.00)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs18{\f0 Participants in population}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 86}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 84}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 84}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\intbl\row\pard +\trowd\trgaph108\trleft0\trqc +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrs\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrs\brdrw15\clvertalt\cellx9000 +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs18{\f0\b Age (years)}\cell +\intbl\row\pard +\trowd\trgaph108\trleft0\trqc +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx3000 +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx4000 +\clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx5000 +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx6000 +\clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx7000 +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx8000 +\clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx9000 +\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs18{\f0 <65}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 14}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (16.279)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 8}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (9.524)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 11}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (13.095)}\cell +\intbl\row\pard +\trowd\trgaph108\trleft0\trqc +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx3000 +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx4000 +\clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx5000 +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx6000 +\clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx7000 +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx8000 +\clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx9000 +\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs18{\f0 >80}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 30}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (34.884)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 29}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (34.524)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 18}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (21.429)}\cell \intbl\row\pard \trowd\trgaph108\trleft0\trqc \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx3000 @@ -70,13 +106,13 @@ \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx7000 \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx8000 \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx9000 -\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs20{\f0 <65}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 14}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.16)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 8}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.10)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 11}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.13)}\cell +\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs18{\f0 65-80}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 42}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (48.837)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 47}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (55.952)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 55}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (65.476)}\cell \intbl\row\pard \trowd\trgaph108\trleft0\trqc \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx3000 @@ -86,13 +122,13 @@ \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx7000 \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx8000 \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx9000 -\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs20{\f0 >80}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 30}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.35)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 29}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.35)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 18}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.21)}\cell +\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell \intbl\row\pard \trowd\trgaph108\trleft0\trqc \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx3000 @@ -102,13 +138,13 @@ \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx7000 \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx8000 \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx9000 -\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs20{\f0 65-80}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 42}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.49)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 47}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.56)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 55}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.65)}\cell +\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs18{\f0 Mean}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 75.2}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 75.7}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 74.4}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell \intbl\row\pard \trowd\trgaph108\trleft0\trqc \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx3000 @@ -118,13 +154,13 @@ \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx7000 \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx8000 \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx9000 -\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs20{\f0 Gender}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 86}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (1.00)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 84}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (1.00)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 84}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (1.00)}\cell +\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs18{\f0 SD}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 8.6}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 8.3}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 7.9}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell \intbl\row\pard \trowd\trgaph108\trleft0\trqc \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx3000 @@ -134,13 +170,13 @@ \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx7000 \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx8000 \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx9000 -\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs20{\f0 F}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 53}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.62)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 50}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.60)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 40}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.48)}\cell +\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs18{\f0 SE}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 0.9}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 0.9}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 0.9}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell \intbl\row\pard \trowd\trgaph108\trleft0\trqc \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx3000 @@ -150,13 +186,13 @@ \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx7000 \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx8000 \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx9000 -\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs20{\f0 M}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 33}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.38)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 34}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.40)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 44}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.52)}\cell +\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs18{\f0 Median}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 76.0}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 77.5}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 76.0}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell \intbl\row\pard \trowd\trgaph108\trleft0\trqc \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx3000 @@ -166,13 +202,69 @@ \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx7000 \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx8000 \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx9000 -\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs20{\f0 Race}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 86}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (1.00)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 84}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (1.00)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 84}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (1.00)}\cell +\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs18{\f0 Q1 to Q3}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 69.25 to 81.75}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 71 to 82}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 70.75 to 80}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\intbl\row\pard +\trowd\trgaph108\trleft0\trqc +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx3000 +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx4000 +\clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx5000 +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx6000 +\clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx7000 +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx8000 +\clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx9000 +\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs18{\f0 Range}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 52 to 89}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 51 to 88}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 56 to 88}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 }\cell +\intbl\row\pard +\trowd\trgaph108\trleft0\trqc +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrs\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrs\brdrw15\clvertalt\cellx9000 +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs18{\f0\b Gender}\cell +\intbl\row\pard +\trowd\trgaph108\trleft0\trqc +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx3000 +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx4000 +\clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx5000 +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx6000 +\clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx7000 +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx8000 +\clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx9000 +\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs18{\f0 F}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 53}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (61.628)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 50}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (59.524)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 40}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (47.619)}\cell +\intbl\row\pard +\trowd\trgaph108\trleft0\trqc +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx3000 +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx4000 +\clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx5000 +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx6000 +\clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx7000 +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx8000 +\clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx9000 +\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs18{\f0 M}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 33}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (38.372)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 34}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (40.476)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 44}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (52.381)}\cell +\intbl\row\pard +\trowd\trgaph108\trleft0\trqc +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrs\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrs\brdrw15\clvertalt\cellx9000 +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs18{\f0\b Race}\cell \intbl\row\pard \trowd\trgaph108\trleft0\trqc \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx3000 @@ -182,13 +274,13 @@ \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx7000 \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx8000 \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx9000 -\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs20{\f0 AMERICAN INDIAN OR ALASKA NATIVE}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 0}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.00)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 0}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.00)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 1}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.01)}\cell +\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs18{\f0 AMERICAN INDIAN OR ALASKA NATIVE}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 0}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (0.000)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 0}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (0.000)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 1}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (1.190)}\cell \intbl\row\pard \trowd\trgaph108\trleft0\trqc \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx3000 @@ -198,13 +290,13 @@ \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx7000 \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrw15\clvertalt\cellx8000 \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrw15\clvertalt\cellx9000 -\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs20{\f0 BLACK OR AFRICAN AMERICAN}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 8}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.09)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 6}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.07)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 9}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.11)}\cell +\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs18{\f0 BLACK OR AFRICAN AMERICAN}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 8}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (9.302)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 6}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (7.143)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 9}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (10.714)}\cell \intbl\row\pard \trowd\trgaph108\trleft0\trqc \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrs\brdrw15\clvertalt\cellx3000 @@ -214,18 +306,18 @@ \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrs\brdrw15\clvertalt\cellx7000 \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrb\brdrs\brdrw15\clvertalt\cellx8000 \clbrdrl\brdrw15\clbrdrt\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrs\brdrw15\clvertalt\cellx9000 -\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs20{\f0 WHITE}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 78}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.91)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 78}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.93)}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 74}\cell -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 (0.88)}\cell +\pard\hyphpar0\sb15\sa15\fi100\li100\ri0\ql\fs18{\f0 WHITE}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 78}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (90.698)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 78}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (92.857)}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 74}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 (88.095)}\cell \intbl\row\pard \trowd\trgaph108\trleft0\trqc \clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrdb\brdrw15\clvertalt\cellx9000 -\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs20{\f0 Every participant is counted a single time for each applicable row and column.}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs18{\f0 SD=Standard deviation; SE=Standard error; Q1=First quartile, Q3=Third quartile.}\cell \intbl\row\pard -{\pard\hyphpar\sb15\sa15\fi0\li0\ri0\qc\fs20{\f0 Source: [CDISCpilot: adam-adsl]}\par} +{\pard\hyphpar\sb15\sa15\fi0\li0\ri0\qc\fs18{\f0 Source: [CDISCpilot: adam-adsl]}\par} } diff --git a/vignettes/outtable/base0charsubgroup.rtf b/vignettes/outtable/base0charsubgroup.rtf new file mode 100644 index 0000000..645f8b9 --- /dev/null +++ b/vignettes/outtable/base0charsubgroup.rtf @@ -0,0 +1,465 @@ +{\rtf1\ansi +\deff0\deflang1033 +{\fonttbl{\f0\froman\fcharset161\fprq2 Times New Roman;} +{\f1\froman\fcharset161\fprq2 Times New Roman Greek;} +{\f2\fswiss\fcharset161\fprq2 Arial Greek;} 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}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs16{\f0 52 to 85}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs16{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs16{\f0 52 to 89}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs16{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs16{\f0 54 to 87}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs16{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs16{\f0 51 to 88}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs16{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs16{\f0 51 to 88}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs16{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs16{\f0 56 to 88}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs16{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs16{\f0 56 to 86}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs16{\f0 }\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs16{\f0 56 to 88}\cell +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs16{\f0 }\cell +\intbl\row\pard +\trowd\trgaph108\trleft0\trqc +\clbrdrl\brdrs\brdrw15\clbrdrt\brdrw15\clbrdrr\brdrs\brdrw15\clbrdrb\brdrdb\brdrw15\clvertalt\cellx12240 +\pard\hyphpar0\sb15\sa15\fi0\li0\ri0\ql\fs16{\f0 SD=Standard deviation.}\cell +\intbl\row\pard +{\pard\hyphpar\sb15\sa15\fi0\li0\ri0\qc\fs16{\f0 Source: [CDISCpilot: adam-adsl]}\par} + +} From 649dc60a29f389c2a6a2c47805887e3f23e1a9cd Mon Sep 17 00:00:00 2001 From: Chen Wang Date: Mon, 30 Sep 2024 10:18:57 -0400 Subject: [PATCH 2/3] 1.rtf_base_char_subgroup 'Split' is used to seperate summary section as this part logic moved to the core funtion. No longer needed. 2.format_base_char_subgroup not use funtion from dplyr --- R/rtf_base_char_subgroup.R | 7 +------ 1 file changed, 1 insertion(+), 6 deletions(-) diff --git a/R/rtf_base_char_subgroup.R b/R/rtf_base_char_subgroup.R index 3c7a0c0..a3e52e7 100644 --- a/R/rtf_base_char_subgroup.R +++ b/R/rtf_base_char_subgroup.R @@ -64,13 +64,8 @@ rtf_base_char_subgroup <- function( out_all <- outdata$out_all tbl <- outdata$tbl - - #Add empty line before stats summary section - tbl<- tbl |> - dplyr::mutate(split = cumsum(ifelse(tolower(name) == outdata$display_stat[1], 1, 0))) |> - dplyr::group_by(split) - tbl1 <- tbl[!names(tbl) %in% c("order","split")] + tbl1 <- tbl[!names(tbl) %in% c("order")] tgroup <- outdata$group sgroup <- outdata$subgroup if (outdata$display_subgroup_total) tgroup <- c(tgroup, "Total") From 5bc10128c54c311c8dbe09478a9549de17877549 Mon Sep 17 00:00:00 2001 From: Chen Wang Date: Mon, 30 Sep 2024 10:19:34 -0400 Subject: [PATCH 3/3] format_base_char_subgroup: not use function from dplyr package --- R/format_base_char_subgroup.R | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/R/format_base_char_subgroup.R b/R/format_base_char_subgroup.R index 765f6da..9f29a57 100644 --- a/R/format_base_char_subgroup.R +++ b/R/format_base_char_subgroup.R @@ -91,7 +91,7 @@ format_base_char_subgroup <- function( # tbl <- tbl[, -which(names(tbl) %in% rm_tot)] #} - outdata$tbl <- tbl |> dplyr::arrange(order) + outdata$tbl <- tbl[order(tbl$order),] outdata$display <- display outdata$display_stat <- display_stat outdata