Repository for calibration, simulation, and validity assessment of a Hybrid Discrete-Continuum model of cancer growth with applications in 3D cancer cell cultures (paper).
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The associated code can be found in the repository of HyMetaGrowth.
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The data associated with this study can be found on the FigShare repository.
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For information on the usage of the code have a look at the README file.
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A presentation related to the numerical methods and their implementation in GPU code can be found here.
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Details on the data processing and segmentation pipeline can be found here.
For any question feel free to contact me at: nikolaos.dimitriou [at] mail.mcgill.ca
If you intend to use this code or data in your publications, please cite:
N. M. Dimitriou, S. Flores-Torres, J. M. Kinsella and G. D. Mitsis, "Quantifying the Morphology and Mechanisms of Cancer Progression in 3D in-vitro environments: Integrating Experiments and Multiscale Models," in IEEE Transactions on Biomedical Engineering, 2022, doi: 10.1109/TBME.2022.3216231.