New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

BFO doesn't have temporal extension that is present in other ontologies in OBO. #1004

Open

DnlRKorn opened this issue Sep 26, 2024 · 1 comment

DnlRKorn commented Sep 26, 2024

Currently the artifacts present in OBO point to https://github.com/BFO-ontology/BFO, which has fewer terms than https://github.com/BFO-ontology/BFO-2020; specifically

BFO:0000117 (has occurrent part)
BFO:0000167 (has participant at all times)

Are both present in other ontologies in OBO but not in our linked OWL for BFO. (https://github.com/BFO-ontology/BFO-2020/blob/12ac8c8b0924ebe5bb049c2173e89f23fc0ad6ad/src/owl/profiles/temporal%20extensions/temporalized%20relations/owl/bfo-temporalized-relations.owl#L771)

Member

jamesaoverton commented Sep 27, 2024

BFO publishes several different versions, listed in their configuration here: https://github.com/OBOFoundry/purl.obolibrary.org/blob/master/config/bfo.yml

Maybe this is the one you want? http://purl.obolibrary.org/obo/bfo/2020/bfo.owl

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment