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.travis.yml
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# Framework for running automated tests on OSB using Travis-CI, see https://github.com/OpenSourceBrain/osb-model-validation
dist: xenial
addons:
apt:
packages:
- python-tk
- python-lxml
- python-tornado
- python-tables
language: python
python: 3.6
env:
- OMV_ENGINE=jNeuroML
- OMV_ENGINE=jNeuroML_NEURON
- OMV_ENGINE=jNeuroML_NetPyNE
- OMV_ENGINE=NEURON:7.4
- OMV_ENGINE=NEURON:7.6
#- OMV_ENGINE=PyNEURON
- OMV_ENGINE=jNeuroML_validate
install:
# Install OMV
- pip install git+https://github.com/OpenSourceBrain/osb-model-validation
- pip install numpy scipy # Why is this needed? Scipy doesn't seem to get installed correctly on trusty with addons above...
- pip install tables # Ditto
- pip install matplotlib # This is more because Matplotlib v2.x is required...
# Install Allen SDK
- pip install allensdk
# See comment in CellTypesDatabase/models/483108201/.test.483108201.nrn.omt_
# Need to pre install NEURON so nrnivmodl can be run targeting mod files in a different directory
- omv install NEURON
#- cd CellTypesDatabase/models/483108201
#- /home/travis/neuron/nrn/x86_64/bin/nrnivmodl modfiles
#- cd -
script:
- omv all -V
- omv list-engines -V