pyproject.toml

[build-system]
requires = ["setuptools", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "mcsim"
dynamic = ["version"]
authors = [
    {name = "Peter T. Brown", email="ptbrown1729@gmail.com"}
]
license = {file = "LICENSE"}
keywords = ["microscopy", "SIM", "structured illumination", "DMD"]
description = "A package for simulating and controlling a multicolor structured illumination microscopy (SIM) experiment using a DLP6500 digital micromirror device (DMD) and performing SIM reconstruction."
readme = "README.md"
classifiers = [
    "Intended Audience :: Education",
    "Intended Audience :: Science/Research",
    "Programming Language :: Python :: 3",
    "Topic :: Scientific/Engineering",
    "Operating System :: Microsoft :: Windows",
    "Operating System :: POSIX",
    "Operating System :: Unix",
]
requires-python = ">=3.9"
dependencies = ['numpy>=1.24',
                'scipy',
                'matplotlib',
                'scikit-image',
                'joblib',
                'psutil',
                'tifffile',
                'pillow',
                'zarr',
                'numcodecs',
                'tqdm',
                'h5py',
                'dask',
                'dask-image',
                'localize_psf @ git+https://git@github.com/qi2lab/localize-psf@master#egg=localize_psf'
                ]

[project.optional-dependencies]
expt_ctrl = ['PyDAQmx ; platform_system == "win32"',
             'pywinusb>=0.4.2 ; platform_system == "win32"']
gpu = ['cupy-cuda11x',  # assuming 11.2 <= CUDA version < 12. Otherwise, manually install
       'cucim @ git+https://github.com/rapidsai/cucim.git@v23.02.00#egg=cucim&subdirectory=python/cucim ; platform_system == "win32"',
       'cucim ; platform_system != "win32"'
      ]
optional = ['napari',
            'miepython',
            'psfmodels']
dev = ['sphinx']
all = ['mcsim[expt_ctrl, gpu, optional, dev]']

[tool.setuptools]
packages = ["mcsim", "mcsim.analysis", "mcsim.expt_ctrl"]

[tool.setuptools.dynamic]
version = {attr = "mcsim.__version__"}