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DESCRIPTION
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Package: schex
Type: Package
Title: Hexbin plots for single cell omics data
Version: 1.17.0
Authors@R:
c(person("Saskia", "Freytag", email = "[email protected]", role = c("aut", "cre")),
person("Wancheng", "Tang", email = "[email protected]", role = c("ctb")),
person("Zimo", "Peng", email = "[email protected]", role = c("ctb")),
person("Jingxiu", "Huang", email = "[email protected]", role = c("ctb")))
Description: Builds hexbin plots for variables and dimension reduction stored
in single cell omics data such as SingleCellExperiment. The
ideas used in this package are based on the excellent work of Dan Carr,
Nicholas Lewin-Koh, Martin Maechler and Thomas Lumley.
Depends: SingleCellExperiment (>= 1.7.4),
ggplot2 (>= 3.2.1)
Imports: hexbin,
stats,
methods,
cluster,
dplyr,
entropy,
ggforce,
grid,
rlang,
concaveman
Suggests:
ggrepel,
knitr,
rmarkdown,
testthat (>= 2.1.0),
covr,
TENxPBMCData,
scater,
Seurat,
shinydashboard,
iSEE,
igraph,
scran,
tibble,
scuttle
URL: https://github.com/SaskiaFreytag/schex
BugReports: https://github.com/SaskiaFreytag/schex/issues
License: GPL-3
Encoding: UTF-8
RoxygenNote: 7.2.3
biocViews: Software, Sequencing,
SingleCell, DimensionReduction, Visualization, ImmunoOncology, DataImport
VignetteBuilder: knitr