DESCRIPTION

Package: fgcz.gsea.ora
Type: Package
Title: ORA, sigORA and GSEA functionalities for proteomic data
Version: 0.1.0
Authors@R: c(person("Lucas", "Kook",
    email = "lucasheinrich.kook@uzh.ch",
    role = c("aut"),
    comment = c(ORCID = "0000-0002-7546-7356")),
    person("Witold E.", "Wolski",
    email = "wew@fgcz.ethz.ch",
    role = c("cre"),
    comment = c(ORCID = "0000-0002-6468-120X")))
Description: Implements gene pair signature based over representation
    analysis and gene set enrichment tools. Allows background specification
    for sigORA using the sigora package  without further ID mapping being necessary.
Depends: R (>= 3.5), WebGestaltR (>= 0.4)
License: GPL-2
Encoding: UTF-8
LazyData: true
Imports: AnnotationDbi,
    dplyr,
    DT,
    ggplot2,
    GO.db,
    httr,
    magrittr,
    org.Hs.eg.db,
    reactome.db,
    readr,
    rlang,
    S4Vectors,
    sigora,
    tibble,
    tidyr,
    tidyverse,
    UpSetR
RoxygenNote: 7.0.2
VignetteBuilder: knitr
Suggests: knitr, rmarkdown, bookdown, slam, BiocStyle, docopt
biocViews: MassSpectrometryData, ReproducibleResearch