Contributing
-2024-01-03
+2024-01-04
Source:vignettes/CONTRIBUTING.Rmd
CONTRIBUTING.Rmd
TADA Module 1: Water Quality Portal Data Discovery and Cleaning
TADA Team
-2024-01-03
+2024-01-04
Source:vignettes/TADAModule1.Rmd
TADAModule1.Rmd
Invalid coordinates
TADA_OverviewMap(TADAProfile)
TADA_OverviewMap(TADAProfile)
The TADA TADA_FlagCoordinates function identifies +
+The TADA TADA_FlagCoordinates function identifies and flags potentially invalid coordinate data. While its functionality is showcased here, it is always important to review any invalid outputs before cleaning to reduce the risk of leaving out usable data/sites.
@@ -3362,8 +3362,8 @@Parameter Level Filtering# choose two and generate scatterplot
TADA_TwoCharacteristicScatterplot(TADAProfileClean6, id_cols = "TADA.ComparableDataIdentifier", groups = c("TOTAL NITROGEN, MIXED FORMS_UNFILTERED_AS N_MG/L", "TOTAL PHOSPHORUS, MIXED FORMS_UNFILTERED_AS P_UG/L"))
#> Warning: Ignoring 552 observations
-
-Now we will summarize results for a single comparable data group
+
+Now we will summarize results for a single comparable data group
using the TADA.ComparableDataIdentifier (i.e., comparable
characteristic, unit, speciation, and fraction combination) using
TADA_Histogram and TADA_Boxplot. Note
@@ -3559,14 +3559,14 @@
Parameter Level Filtering
# view histogram
TP_Histogram
-
-Generate interactive box plot.
+
+Generate interactive box plot.
TP_Boxplot <- TADA::TADA_Boxplot(TADAProfileCleanTP, id_cols = "TADA.ComparableDataIdentifier")
TP_Boxplot
-
-Generate interactive scatterplot.
+
+Generate interactive scatterplot.
TADAProfileCleanTP_dailymax <- TADA_AggregateMeasurements(TADAProfileCleanTP,
agg_fun = c("max"),
@@ -3580,8 +3580,8 @@ Parameter Level FilteringTP_Scatterplot <- TADA::TADA_Scatterplot(TADAProfileCleanTP_dailymax, id_cols = "TADA.ComparableDataIdentifier")
TP_Scatterplot
-
-
+
+
TADA Shiny Application
diff --git a/articles/TADATrainingShepherdstown.html b/articles/TADATrainingShepherdstown.html
index d69396de..19941b4e 100644
--- a/articles/TADATrainingShepherdstown.html
+++ b/articles/TADATrainingShepherdstown.html
@@ -74,7 +74,7 @@
TADA R Package Training: A Markdown for Shepherdstown
TADA Team
- 2024-01-03
+ 2024-01-04
Source: vignettes/TADATrainingShepherdstown.Rmd
TADATrainingShepherdstown.Rmd
diff --git a/articles/WQXValidationService.html b/articles/WQXValidationService.html
index 3edfbf80..d1e1bf05 100644
--- a/articles/WQXValidationService.html
+++ b/articles/WQXValidationService.html
@@ -74,7 +74,7 @@
WQX QAQC Service User Guide
TADA Team
- 2024-01-03
+ 2024-01-04
Source: vignettes/WQXValidationService.Rmd
WQXValidationService.Rmd
diff --git a/pkgdown.yml b/pkgdown.yml
index 68d86cca..0946862e 100644
--- a/pkgdown.yml
+++ b/pkgdown.yml
@@ -6,7 +6,7 @@ articles:
TADAModule1: TADAModule1.html
TADATrainingShepherdstown: TADATrainingShepherdstown.html
WQXValidationService: WQXValidationService.html
-last_built: 2024-01-03T22:53Z
+last_built: 2024-01-04T22:31Z
urls:
reference: usepa.github.io/TADA/reference
article: usepa.github.io/TADA/articles
diff --git a/reference/TADA_Boxplot.html b/reference/TADA_Boxplot.html
index 2e49bdd9..d46b3909 100644
--- a/reference/TADA_Boxplot.html
+++ b/reference/TADA_Boxplot.html
@@ -99,20 +99,20 @@ Examplesdf <- dplyr::filter(Data_6Tribes_5y_Harmonized, TADA.ComparableDataIdentifier == "TOTAL PHOSPHORUS, MIXED FORMS_UNFILTERED_AS P_UG/L")
# Generate single boxplot
TADA_Boxplot(df, id_cols = "TADA.ComparableDataIdentifier")
-
-
+
+
# Create multiple boxplots with additional grouping columns and view the first
# plot in list. In this example, we will group data in the input dataframe
# by both the TADA.ComparableDataIdentifier and the OrganizationIdentifier
Boxplots_TPbyOrg <- TADA_Boxplot(df, id_cols = c("TADA.ComparableDataIdentifier", "OrganizationIdentifier"))
# This example generates 4 box plots.
Boxplots_TPbyOrg[[1]]
-
-Boxplots_TPbyOrg[[2]]
-
-Boxplots_TPbyOrg[[3]]
-
-
+
+Boxplots_TPbyOrg[[2]]
+
+Boxplots_TPbyOrg[[3]]
+
+
# Create multiple boxplots with additional grouping columns and view the first
# plot in list. In this example, we will group data in the input dataframe
# by both the TADA.ComparableDataIdentifier and the MonitoringLocationTypeName
@@ -123,12 +123,12 @@ Examples#> [1] "Plotting function removed 2635 results where TADA.ResultMeasureValue = NA. These results cannot be plotted."
# This example generates 45 box plots.
Boxplot_output[[2]]
-
-Boxplot_output[[25]]
-
-Boxplot_output[[40]]
-
-
+
+Boxplot_output[[25]]
+
+Boxplot_output[[40]]
+
+
Generate interactive box plot.
+ +Generate interactive box plot.
TP_Boxplot <- TADA::TADA_Boxplot(TADAProfileCleanTP, id_cols = "TADA.ComparableDataIdentifier")
TP_Boxplot
Generate interactive scatterplot.
+ +Generate interactive scatterplot.
TADAProfileCleanTP_dailymax <- TADA_AggregateMeasurements(TADAProfileCleanTP,
agg_fun = c("max"),
@@ -3580,8 +3580,8 @@ Parameter Level FilteringTP_Scatterplot <- TADA::TADA_Scatterplot(TADAProfileCleanTP_dailymax, id_cols = "TADA.ComparableDataIdentifier")
TP_Scatterplot
TADA Shiny Application
diff --git a/articles/TADATrainingShepherdstown.html b/articles/TADATrainingShepherdstown.html
index d69396de..19941b4e 100644
--- a/articles/TADATrainingShepherdstown.html
+++ b/articles/TADATrainingShepherdstown.html
@@ -74,7 +74,7 @@
TADA R Package Training: A Markdown for Shepherdstown
TADA Team
- 2024-01-03
+ 2024-01-04
Source: vignettes/TADATrainingShepherdstown.Rmd
TADATrainingShepherdstown.Rmd
diff --git a/articles/WQXValidationService.html b/articles/WQXValidationService.html
index 3edfbf80..d1e1bf05 100644
--- a/articles/WQXValidationService.html
+++ b/articles/WQXValidationService.html
@@ -74,7 +74,7 @@
WQX QAQC Service User Guide
TADA Team
- 2024-01-03
+ 2024-01-04
Source: vignettes/WQXValidationService.Rmd
WQXValidationService.Rmd
diff --git a/pkgdown.yml b/pkgdown.yml
index 68d86cca..0946862e 100644
--- a/pkgdown.yml
+++ b/pkgdown.yml
@@ -6,7 +6,7 @@ articles:
TADAModule1: TADAModule1.html
TADATrainingShepherdstown: TADATrainingShepherdstown.html
WQXValidationService: WQXValidationService.html
-last_built: 2024-01-03T22:53Z
+last_built: 2024-01-04T22:31Z
urls:
reference: usepa.github.io/TADA/reference
article: usepa.github.io/TADA/articles
diff --git a/reference/TADA_Boxplot.html b/reference/TADA_Boxplot.html
index 2e49bdd9..d46b3909 100644
--- a/reference/TADA_Boxplot.html
+++ b/reference/TADA_Boxplot.html
@@ -99,20 +99,20 @@ Examplesdf <- dplyr::filter(Data_6Tribes_5y_Harmonized, TADA.ComparableDataIdentifier == "TOTAL PHOSPHORUS, MIXED FORMS_UNFILTERED_AS P_UG/L")
# Generate single boxplot
TADA_Boxplot(df, id_cols = "TADA.ComparableDataIdentifier")
-
-
+
+
# Create multiple boxplots with additional grouping columns and view the first
# plot in list. In this example, we will group data in the input dataframe
# by both the TADA.ComparableDataIdentifier and the OrganizationIdentifier
Boxplots_TPbyOrg <- TADA_Boxplot(df, id_cols = c("TADA.ComparableDataIdentifier", "OrganizationIdentifier"))
# This example generates 4 box plots.
Boxplots_TPbyOrg[[1]]
-
-Boxplots_TPbyOrg[[2]]
-
-Boxplots_TPbyOrg[[3]]
-
-
+
+Boxplots_TPbyOrg[[2]]
+
+Boxplots_TPbyOrg[[3]]
+
+
# Create multiple boxplots with additional grouping columns and view the first
# plot in list. In this example, we will group data in the input dataframe
# by both the TADA.ComparableDataIdentifier and the MonitoringLocationTypeName
@@ -123,12 +123,12 @@ Examples#> [1] "Plotting function removed 2635 results where TADA.ResultMeasureValue = NA. These results cannot be plotted."
# This example generates 45 box plots.
Boxplot_output[[2]]
-
-Boxplot_output[[25]]
-
-Boxplot_output[[40]]
-
-
+
+Boxplot_output[[25]]
+
+Boxplot_output[[40]]
+
+
TADATrainingShepherdstown.Rmd
WQXValidationService.Rmd