From ee1b0188d4de7cb385a31f93155a104e93691a6a Mon Sep 17 00:00:00 2001 From: Martin Kim Date: Fri, 9 Feb 2024 10:56:25 -0800 Subject: [PATCH] Add install from scvi-tools main to workflows --- .github/workflows/test_linux.yaml | 4 ++++ .github/workflows/test_linux_cuda.yaml | 4 ++++ .github/workflows/test_linux_pre.yaml | 4 ++++ 3 files changed, 12 insertions(+) diff --git a/.github/workflows/test_linux.yaml b/.github/workflows/test_linux.yaml index 4c7d162..3a3fd21 100644 --- a/.github/workflows/test_linux.yaml +++ b/.github/workflows/test_linux.yaml @@ -42,6 +42,10 @@ jobs: run: | python -m pip install --upgrade pip wheel + - name: Install scvi-tools from main + run: | + pip install --no-cache-dir "scvi-tools @ git+https://github.com/scverse/scvi-tools@main" + - name: Install dependencies run: | pip install --pre ".[dev,test]" diff --git a/.github/workflows/test_linux_cuda.yaml b/.github/workflows/test_linux_cuda.yaml index 1f80913..a50bc8f 100644 --- a/.github/workflows/test_linux_cuda.yaml +++ b/.github/workflows/test_linux_cuda.yaml @@ -46,6 +46,10 @@ jobs: steps: - uses: actions/checkout@v4 + - name: Install scvi-tools from main + run: | + pip install --no-cache-dir "scvi-tools @ git+https://github.com/scverse/scvi-tools@main" + - name: Install dependencies run: | pip install ".[dev,test]" diff --git a/.github/workflows/test_linux_pre.yaml b/.github/workflows/test_linux_pre.yaml index 69d7ed4..026e39d 100644 --- a/.github/workflows/test_linux_pre.yaml +++ b/.github/workflows/test_linux_pre.yaml @@ -52,6 +52,10 @@ jobs: run: | python -m pip install --upgrade pip wheel + - name: Install scvi-tools from main + run: | + pip install --no-cache-dir "scvi-tools @ git+https://github.com/scverse/scvi-tools@main" + - name: Install dependencies run: | pip install --pre ".[dev,test]"