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environment.yml
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name: QC
channels:
- bioconda
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- _r-mutex=1.0.1=anacondar_1
- alsa-lib=1.2.8=h166bdaf_0
- binutils_impl_linux-64=2.39=h6ceecb4_0
- bwidget=1.9.14=ha770c72_1
- bzip2=1.0.8=h7f98852_4
- c-ares=1.18.1=h7f98852_0
- ca-certificates=2022.9.24=ha878542_0
- cairo=1.16.0=ha61ee94_1014
- curl=7.86.0=h7bff187_1
- dos2unix=7.4.1=0
- expat=2.5.0=h27087fc_0
- fastqc=0.11.9=hdfd78af_1
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=hab24e00_0
- fontconfig=2.14.1=hc2a2eb6_0
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- freetype=2.12.1=hca18f0e_0
- fribidi=1.0.10=h36c2ea0_0
- gcc_impl_linux-64=12.2.0=hcc96c02_19
- gettext=0.21.1=h27087fc_0
- gfortran_impl_linux-64=12.2.0=h55be85b_19
- giflib=5.2.1=h36c2ea0_2
- graphite2=1.3.13=h58526e2_1001
- gsl=2.7=he838d99_0
- gxx_impl_linux-64=12.2.0=hcc96c02_19
- harfbuzz=5.3.0=h418a68e_0
- htslib=1.16=h6bc39ce_0
- icu=70.1=h27087fc_0
- jpeg=9e=h166bdaf_2
- kernel-headers_linux-64=2.6.32=he073ed8_15
- keyutils=1.6.1=h166bdaf_0
- krb5=1.19.3=h3790be6_0
- lcms2=2.14=h6ed2654_0
- ld_impl_linux-64=2.39=hc81fddc_0
- lerc=4.0.0=h27087fc_0
- libblas=3.9.0=16_linux64_openblas
- libcblas=3.9.0=16_linux64_openblas
- libcups=2.3.3=h3e49a29_2
- libcurl=7.86.0=h7bff187_1
- libdeflate=1.13=h166bdaf_0
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libffi=3.4.2=h7f98852_5
- libgcc-devel_linux-64=12.2.0=h3b97bd3_19
- libgcc-ng=12.2.0=h65d4601_19
- libgfortran-ng=12.2.0=h69a702a_19
- libgfortran5=12.2.0=h337968e_19
- libglib=2.74.1=h606061b_1
- libgomp=12.2.0=h65d4601_19
- libiconv=1.17=h166bdaf_0
- liblapack=3.9.0=16_linux64_openblas
- libnghttp2=1.47.0=hdcd2b5c_1
- libnsl=2.0.0=h7f98852_0
- libopenblas=0.3.21=pthreads_h78a6416_3
- libpng=1.6.38=h753d276_0
- libsanitizer=12.2.0=h46fd767_19
- libsqlite=3.39.4=h753d276_0
- libssh2=1.10.0=haa6b8db_3
- libstdcxx-devel_linux-64=12.2.0=h3b97bd3_19
- libstdcxx-ng=12.2.0=h46fd767_19
- libtiff=4.4.0=h0e0dad5_3
- libuuid=2.32.1=h7f98852_1000
- libwebp-base=1.2.4=h166bdaf_0
- libxcb=1.13=h7f98852_1004
- libxml2=2.10.3=h7463322_0
- libzlib=1.2.13=h166bdaf_4
- make=4.3=hd18ef5c_1
- ncurses=6.3=h27087fc_1
- openjdk=17.0.3=hafdced1_4
- openssl=1.1.1s=h166bdaf_0
- pango=1.50.11=h382ae3d_0
- parallel=20170422=pl5.22.0_0
- pcre2=10.40=hc3806b6_0
- perl=5.22.0.1=0
- pip=22.3.1=pyhd8ed1ab_0
- pixman=0.40.0=h36c2ea0_0
- pthread-stubs=0.4=h36c2ea0_1001
- python=3.11.0=h582c2e5_0_cpython
- r-base=4.2.2=hb87df5d_1
- readline=8.1.2=h0f457ee_0
- samtools=1.16.1=h6899075_1
- sed=4.8=he412f7d_0
- setuptools=65.5.1=pyhd8ed1ab_0
- sysroot_linux-64=2.12=he073ed8_15
- tk=8.6.12=h27826a3_0
- tktable=2.10=hb7b940f_3
- tzdata=2022f=h191b570_0
- wheel=0.38.4=pyhd8ed1ab_0
- xorg-fixesproto=5.0=h7f98852_1002
- xorg-inputproto=2.3.2=h7f98852_1002
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.0.10=h7f98852_0
- xorg-libsm=1.2.3=hd9c2040_1000
- xorg-libx11=1.7.2=h7f98852_0
- xorg-libxau=1.0.9=h7f98852_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h7f98852_1
- xorg-libxfixes=5.0.3=h7f98852_1004
- xorg-libxi=1.7.10=h7f98852_0
- xorg-libxrender=0.9.10=h7f98852_1003
- xorg-libxt=1.2.1=h7f98852_2
- xorg-libxtst=1.2.3=h7f98852_1002
- xorg-recordproto=1.14.2=h7f98852_1002
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h7f98852_1002
- xorg-xproto=7.0.31=h7f98852_1007
- xz=5.2.6=h166bdaf_0
- zlib=1.2.13=h166bdaf_4
- zstd=1.5.2=h6239696_4
- pip:
- certifi==2022.9.24
- contourpy==1.0.6
- cycler==0.11.0
- fonttools==4.38.0
- fpdf==1.7.2
- kiwisolver==1.4.4
- matplotlib==3.6.2
- numpy==1.23.4
- packaging==21.3
- pandas==1.5.1
- pillow==9.3.0
- pyparsing==3.0.9
- python-dateutil==2.8.2
- pytz==2022.6
- scipy==1.9.3
- seaborn==0.12.1
- six==1.16.0
- xlsxwriter==3.0.3
prefix: /home/afuentri/miniconda3/envs/QC