diff --git a/Dockerfile b/Dockerfile index 474a12fc..5baa1e22 100644 --- a/Dockerfile +++ b/Dockerfile @@ -24,7 +24,7 @@ ENV VIRTUAL_ENV=/app/.venv \ ENABLE_AIOHTTPCLIENT=false \ ENABLE_HTTPX=false -RUN apt-get update && apt-get install -y libgl1 libglib2.0-0 curl +RUN apt-get update && apt-get install -y libgl1 libglib2.0-0 libgomp1 curl # setup paddleocr dependencies RUN mkdir -p /root/.paddleocr/whl/det/ch/ch_PP-OCRv4_det_infer \ diff --git a/Dockerfile_gpu b/Dockerfile_gpu index 64fb764b..cf87ff08 100644 --- a/Dockerfile_gpu +++ b/Dockerfile_gpu @@ -27,7 +27,7 @@ ENV VIRTUAL_ENV=/app/.venv \ ENABLE_AIOHTTPCLIENT=false \ ENABLE_HTTPX=false -RUN apt-get update && apt-get install -y libgl1 libglib2.0-0 curl +RUN apt-get update && apt-get install -y libgl1 libglib2.0-0 libgomp1 curl # setup paddleocr dependencies RUN mkdir -p /root/.paddleocr/whl/det/ch/ch_PP-OCRv4_det_infer \ diff --git a/poetry.lock b/poetry.lock index ed3970bf..8a8432dd 100644 --- a/poetry.lock +++ b/poetry.lock @@ 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{version = "0.17.2", markers = "sys_platform == 'darwin'"} ] -transformers = "4.42.4" +transformers = "^4.42.4" openpyxl = "^3.1.2" pdf2image = "^1.17.0" -llama-index-storage-chat-store-redis = "^0.1.3" python-bidi = "0.4.2" easyocr = "^1.7.1" opencv-python = "^4.6.0.66" @@ -62,10 +68,7 @@ pypdf2 = "^3.0.1" pdfplumber = "^0.11.0" pdfminer-six = "^20231228" openinference-semantic-conventions = "^0.1.9" -llama-index-tools-google = "^0.1.5" -llama-index-tools-duckduckgo = "^0.1.1" openinference-instrumentation = "^0.1.12" -llama-index-llms-huggingface = "^0.2.0" pytest-asyncio = "^0.23.7" pytest-cov = "^5.0.0" xlrd = "^2.0.1" @@ -74,41 +77,37 @@ chardet = "^5.2.0" locust = "^2.29.0" gunicorn = "^22.0.0" umap-learn = "^0.5.6" -protobuf = "3.20.2" +protobuf = "^3.20.2" modelscope = "^1.16.0" -llama-index-multi-modal-llms-dashscope = "^0.1.2" -llama-index-vector-stores-alibabacloud-opensearch = "^0.1.0" asyncpg = "^0.29.0" pgvector = "^0.3.2" pre-commit = "^3.8.0" cn-clip = "^1.5.1" 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"^0.1.5" -llama-index-tools-duckduckgo = "^0.1.1" openinference-instrumentation = "^0.1.12" -llama-index-llms-huggingface = "^0.2.0" pytest-asyncio = "^0.23.7" pytest-cov = "^5.0.0" xlrd = "^2.0.1" @@ -68,18 +70,13 @@ chardet = "^5.2.0" locust = "^2.29.0" gunicorn = "^22.0.0" umap-learn = "^0.5.6" -protobuf = "3.20.2" +protobuf = "^3.20.2" modelscope = "^1.16.0" -llama-index-multi-modal-llms-dashscope = "^0.1.2" -llama-index-vector-stores-alibabacloud-opensearch = "^0.1.0" asyncpg = "^0.29.0" pgvector = "^0.3.2" pre-commit = "^3.8.0" cn-clip = "^1.5.1" -llama-index-llms-paieas = "^0.1.0" pymysql = "^1.1.1" -llama-index-experimental = "^0.2.0" -llama-index-readers-web = "^0.1.23" milvus-lite = "^2.4.9" rapidocr-onnxruntime = "^1.3.24" rapid-table = "^0.1.3" @@ -100,11 +97,12 @@ aliyun-bootstrap = "^1.0.2" docx = "^0.2.4" python-pptx = "^1.0.2" aspose-slides = "^24.10.0" -ultralytics = "8.3.58" +ultralytics = "^8.3.43" datasketch = "^1.6.5" tablestore = "^6.1.0" +anyio = "^4.6.2.post1" mistletoe = "^1.4.0" -anyio = "4.6.2.post1" +html2text = "^2024.2.26" [tool.poetry.scripts] pai_rag = "pai_rag.main:run" diff --git a/src/pai_rag/app/web/index_utils.py b/src/pai_rag/app/web/index_utils.py index 72b3e251..f1c1ab44 100644 --- a/src/pai_rag/app/web/index_utils.py +++ b/src/pai_rag/app/web/index_utils.py @@ -180,7 +180,7 @@ def index_to_components_settings( {"value": ""}, {"value": ""}, {"value": ""}, - {"value": ""}, + {"value": "cn-hangzhou"}, {"value": ""}, {"value": ""}, {"value": ""}, diff --git a/src/pai_rag/app/web/rag_client.py b/src/pai_rag/app/web/rag_client.py index c2b1e946..d31b10b7 100644 --- a/src/pai_rag/app/web/rag_client.py +++ b/src/pai_rag/app/web/rag_client.py @@ -208,6 +208,7 @@ def _format_rag_response( formatted_answer += f"**Reference**:\n {referenced_docs}" response["result"] = formatted_answer + return response def check_health(self): diff --git a/src/pai_rag/app/web/tabs/data_analysis_tab.py b/src/pai_rag/app/web/tabs/data_analysis_tab.py index 4d06271c..7785ab58 100644 --- a/src/pai_rag/app/web/tabs/data_analysis_tab.py +++ b/src/pai_rag/app/web/tabs/data_analysis_tab.py @@ -57,7 +57,6 @@ def load_db_info_fn(input_elements: List[Any]): else: update_dict["enable_query_preprocessor"] = False update_dict["enable_db_preretriever"] = False - print("update_dict:", update_dict) rag_client.patch_config(update_dict) except RagApiError as api_error: raise gr.Error(f"HTTP {api_error.code} Error: {api_error.msg}") diff --git a/src/pai_rag/app/web/tabs/settings_tab.py b/src/pai_rag/app/web/tabs/settings_tab.py index 2c796dbe..ca1400f8 100644 --- a/src/pai_rag/app/web/tabs/settings_tab.py +++ b/src/pai_rag/app/web/tabs/settings_tab.py @@ -261,7 +261,7 @@ def create_setting_tab() -> Dict[str, Any]: oss_endpoint = gr.Textbox( label="OSS Endpoint", elem_id="oss_endpoint", - default="oss-cn-hangzhou.aliyuncs.com", + placeholder="oss-cn-hangzhou.aliyuncs.com", ) use_oss.input( fn=ev_listeners.change_use_oss, diff --git a/src/pai_rag/app/web/tabs/upload_tab.py b/src/pai_rag/app/web/tabs/upload_tab.py index 178eb1e8..365efdf3 100644 --- a/src/pai_rag/app/web/tabs/upload_tab.py +++ b/src/pai_rag/app/web/tabs/upload_tab.py @@ -124,7 +124,7 @@ def upload_knowledge( result = {"Info": ["StartTime", "EndTime", "Duration(s)", "Status"]} error_msg = "" - while not all(file.finished is True for file in my_upload_files): + while True: for file in my_upload_files: try: response = asyncio.run( @@ -144,12 +144,16 @@ def upload_knowledge( gr.update(visible=True, value=pd.DataFrame(result)), gr.update(visible=False), ] - if not all(file.finished is True for file in my_upload_files): - time.sleep(2) + + if all(file.finished is True for file in my_upload_files): + break + + time.sleep(2) upload_result = "Upload success." if error_msg: upload_result = f"Upload failed: {error_msg}" + yield [ gr.update(visible=True, value=pd.DataFrame(result)), gr.update( diff --git a/src/pai_rag/app/web/tabs/vector_db_panel.py b/src/pai_rag/app/web/tabs/vector_db_panel.py index 83053f42..655a8cff 100644 --- a/src/pai_rag/app/web/tabs/vector_db_panel.py +++ b/src/pai_rag/app/web/tabs/vector_db_panel.py @@ -47,6 +47,7 @@ def create_vector_db_panel() -> Dict[str, Any]: "cn-shenzhen", "cn-chengdu", ], + value="cn-hangzhou", label="RegionId", elem_id="adb_region_id", ) diff --git a/src/pai_rag/app/web/ui_constants.py b/src/pai_rag/app/web/ui_constants.py index 3ec73f4d..66b7c4cf 100644 --- a/src/pai_rag/app/web/ui_constants.py +++ b/src/pai_rag/app/web/ui_constants.py @@ -19,16 +19,27 @@ # """ WELCOME_MESSAGE = """ - # \N{fire} PAI-RAG Dashboard - - #### \N{rocket} Join the DingTalk Q&A Group: 27370042974 - """ +
\N{fire} PAI-RAG Dashboard \N{rocket} Join the DingTalk Q&A Group: 27370042974
+ """ DEFAULT_CSS_STYPE = """ - h1, h3, h4 { + .title { + margin-block-start: 0.2em; + margin-block-end: 0.2em; text-align: center; display:block; } + + .head { + font-size: 2em; + font-weight: bold; + } + + .subhead { + margin: 1.5em; + font-size: 1em; + font-weight: bold; + } """ DEFAULT_EMBED_SIZE = 1024 diff --git a/src/pai_rag/app/web/webui.py b/src/pai_rag/app/web/webui.py index bc710c9c..f78afb05 100644 --- a/src/pai_rag/app/web/webui.py +++ b/src/pai_rag/app/web/webui.py @@ -1,4 +1,3 @@ -from urllib.parse import urljoin from fastapi import FastAPI import gradio as gr from pai_rag.app.web import event_listeners @@ -135,13 +134,11 @@ def configure_webapp(app: FastAPI, web_url, rag_url=DEFAULT_LOCAL_URL) -> gr.Blo rag_client.set_endpoint(rag_url) chat_page = create_chat_ui() - chat_page.queue(concurrency_count=1, max_size=64) - chat_page._queue.set_url(urljoin(web_url, "chat/")) + chat_page.queue(api_open=True, max_size=64) gr.mount_gradio_app(app, chat_page, path="/chat") home = make_homepage() - home.queue(concurrency_count=1, max_size=64) - home._queue.set_url(urljoin(web_url, "/")) + chat_page.queue(api_open=True, max_size=64) logger.info(f"web_url: {web_url}") gr.mount_gradio_app(app, home, path="/") return diff --git a/src/pai_rag/evaluation/metrics/response/correctness.py b/src/pai_rag/evaluation/metrics/response/correctness.py index 423471df..b4470546 100644 --- a/src/pai_rag/evaluation/metrics/response/correctness.py +++ b/src/pai_rag/evaluation/metrics/response/correctness.py @@ -101,7 +101,6 @@ class Correctness(LlmMetric): Passing is defined as a score greater than or equal to the given threshold. Args: - service_context (Optional[ServiceContext]): Service context. eval_template (Optional[Union[BasePromptTemplate, str]]): Template for the evaluation prompt. score_threshold (float): Numerical threshold for passing the evaluation, diff --git a/src/pai_rag/integrations/agent/pai/pai_agent.py b/src/pai_rag/integrations/agent/pai/pai_agent.py index d81ce8f9..5d53ace0 100644 --- a/src/pai_rag/integrations/agent/pai/pai_agent.py +++ b/src/pai_rag/integrations/agent/pai/pai_agent.py @@ -7,7 +7,7 @@ Type, ) import json -from llama_index.agent.openai.step import OpenAIAgentWorker +from llama_index.agent.openai import OpenAIAgentWorker from llama_index.core.agent.runner.base import AgentRunner from llama_index.core.callbacks import CallbackManager from llama_index.core.base.llms.types import ChatMessage diff --git a/src/pai_rag/integrations/chat_store/pai/pai_chat_store.py b/src/pai_rag/integrations/chat_store/pai/pai_chat_store.py index 20f27d22..ff808d5f 100644 --- a/src/pai_rag/integrations/chat_store/pai/pai_chat_store.py +++ b/src/pai_rag/integrations/chat_store/pai/pai_chat_store.py @@ -60,8 +60,8 @@ class PaiChatStore(BaseChatStore): _chat_store: Any = PrivateAttr() def __init__(self, chat_store_config: BaseChatStoreConfig): - self._chat_store = create_chat_store(chat_store_config) super().__init__() + self._chat_store = create_chat_store(chat_store_config) @classmethod def class_name(cls) -> str: diff --git a/src/pai_rag/integrations/data_analysis/data_analysis_synthesizer.py b/src/pai_rag/integrations/data_analysis/data_analysis_synthesizer.py index 98bb8890..bd5b873f 100644 --- a/src/pai_rag/integrations/data_analysis/data_analysis_synthesizer.py +++ b/src/pai_rag/integrations/data_analysis/data_analysis_synthesizer.py @@ -4,12 +4,10 @@ from llama_index.core.callbacks.base import CallbackManager from llama_index.core.indices.prompt_helper import PromptHelper from llama_index.core.prompts import BasePromptTemplate -from llama_index.core.settings import Settings from llama_index.core.schema import NodeWithScore, QueryType, QueryBundle from llama_index.core.prompts.mixin import PromptDictType from llama_index.core.response_synthesizers.base import BaseSynthesizer -from llama_index.core.service_context import ServiceContext -from llama_index.core.service_context_elements.llm_predictor import LLMPredictorType +from llama_index.core.llms import LLM from llama_index.core.types import RESPONSE_TEXT_TYPE from llama_index.core.base.response.schema import ( RESPONSE_TYPE, @@ -44,31 +42,24 @@ async def empty_response_agenerator() -> AsyncGenerator[str, None]: class DataAnalysisSynthesizer(BaseSynthesizer): def __init__( self, - llm: Optional[LLMPredictorType] = None, + llm: Optional[LLM] = None, callback_manager: Optional[CallbackManager] = None, prompt_helper: Optional[PromptHelper] = None, response_synthesis_prompt: Optional[BasePromptTemplate] = None, streaming: bool = False, - # deprecated - service_context: Optional[ServiceContext] = None, ) -> None: - logger.info("DataAnalysisSynthesizer initialized") - if service_context is not None: - prompt_helper = service_context.prompt_helper - - self._llm = llm or Settings.llm - self._response_synthesis_prompt = ( - response_synthesis_prompt or DEFAULT_RESPONSE_SYNTHESIS_PROMPT - ) - super().__init__( llm=llm, callback_manager=callback_manager, prompt_helper=prompt_helper, - service_context=service_context, streaming=streaming, ) + self._response_synthesis_prompt = ( + response_synthesis_prompt or DEFAULT_RESPONSE_SYNTHESIS_PROMPT + ) + logger.info("DataAnalysisSynthesizer initialized") + def _get_prompts(self) -> PromptDictType: """Get prompts.""" return {"response_synthesis_prompt": self._response_synthesis_prompt} diff --git a/src/pai_rag/integrations/data_analysis/data_analysis_tool.py b/src/pai_rag/integrations/data_analysis/data_analysis_tool.py index 554d7eaa..4b8b7381 100644 --- a/src/pai_rag/integrations/data_analysis/data_analysis_tool.py +++ b/src/pai_rag/integrations/data_analysis/data_analysis_tool.py @@ -203,6 +203,8 @@ def __init__( callback_manager: Optional[CallbackManager] = None, ) -> None: """Initialize params.""" + super().__init__(callback_manager=callback_manager or Settings.callback_manager) + self._llm = llm or Settings.llm self._sql_database = sql_database self._retriever = create_retriever( @@ -216,7 +218,6 @@ def __init__( response_synthesis_prompt=PromptTemplate(analysis_config.synthesizer_prompt) or DEFAULT_RESPONSE_SYNTHESIS_PROMPT, ) - super().__init__(callback_manager=callback_manager) def _get_prompt_modules(self) -> PromptMixinType: """Get prompt sub-modules.""" diff --git a/src/pai_rag/integrations/data_analysis/nl2pandas_retriever.py b/src/pai_rag/integrations/data_analysis/nl2pandas_retriever.py index 8c5f0ced..0b3d1814 100644 --- a/src/pai_rag/integrations/data_analysis/nl2pandas_retriever.py +++ b/src/pai_rag/integrations/data_analysis/nl2pandas_retriever.py @@ -10,12 +10,11 @@ from llama_index.core.schema import NodeWithScore, QueryBundle, QueryType, TextNode from llama_index.core.settings import Settings from llama_index.core.callbacks.base import CallbackManager -from llama_index.experimental.query_engine.pandas.output_parser import ( - PandasInstructionParser, -) from pai_rag.integrations.data_analysis.data_analysis_config import PandasAnalysisConfig - +from pai_rag.integrations.data_analysis.pandas_instruction_parser import ( + PandasInstructionParser, +) DEFAULT_INSTRUCTION_STR = ( "1. Convert the query to executable Python code using Pandas.\n" @@ -113,6 +112,7 @@ def __init__( **kwargs: Any, ) -> None: """Initialize params.""" + super().__init__(callback_manager or Settings.callback_manager) self._df = df self._head = head @@ -123,8 +123,6 @@ def __init__( ) self._llm = llm or Settings.llm - super().__init__(callback_manager) - @classmethod def from_config( cls, diff --git a/src/pai_rag/integrations/data_analysis/nl2sql/db_descriptor.py b/src/pai_rag/integrations/data_analysis/nl2sql/db_descriptor.py index c305b676..2d803aee 100644 --- a/src/pai_rag/integrations/data_analysis/nl2sql/db_descriptor.py +++ b/src/pai_rag/integrations/data_analysis/nl2sql/db_descriptor.py @@ -12,7 +12,6 @@ from llama_index.core.objects.base import ObjectRetriever from llama_index.core.objects.table_node_mapping import SQLTableSchema from llama_index.core.schema import QueryBundle -from llama_index.core.service_context import ServiceContext from llama_index.core import Settings from llama_index.core.utilities.sql_wrapper import SQLDatabase from llama_index.core import BasePromptTemplate @@ -48,7 +47,6 @@ def __init__( context_str_prefix: Optional[str] = None, llm: Optional[LLM] = None, embed_model: Optional[BaseEmbedding] = None, - service_context: Optional[ServiceContext] = None, db_summary_prompt: Optional[BasePromptTemplate] = None, db_description_file_path: Optional[str] = None, ) -> None: diff --git a/src/pai_rag/integrations/data_analysis/nl2sql_retriever.py b/src/pai_rag/integrations/data_analysis/nl2sql_retriever.py index b3e30118..9aad0528 100644 --- a/src/pai_rag/integrations/data_analysis/nl2sql_retriever.py +++ b/src/pai_rag/integrations/data_analysis/nl2sql_retriever.py @@ -33,12 +33,7 @@ PromptMixinType, ) from llama_index.core.schema import NodeWithScore, QueryBundle, QueryType, TextNode -from llama_index.core.service_context import ServiceContext -from llama_index.core.settings import ( - Settings, - embed_model_from_settings_or_context, - llm_from_settings_or_context, -) +from llama_index.core.settings import Settings from sqlalchemy import Table from pai_rag.integrations.data_analysis.data_analysis_config import ( @@ -94,10 +89,11 @@ def __init__( callback_manager: Optional[CallbackManager] = None, **kwargs: Any, ) -> None: + super().__init__(callback_manager or Settings.callback_manager) + """Initialize params.""" self._sql_database = sql_database self._return_raw = return_raw - super().__init__(callback_manager) def _format_node_results( self, results: List[List[Any]], col_keys: List[str] @@ -337,7 +333,6 @@ class MyNLSQLRetriever(PromptMixin): table_retriever (ObjectRetriever[SQLTableSchema]): Object retriever for SQLTableSchema objects. Defaults to None. context_str_prefix (str): Prefix for context string. Defaults to None. - service_context (ServiceContext): Service context. Defaults to None. return_raw (bool): Whether to return plain-text dump of SQL results, or parsed into Nodes. handle_sql_errors (bool): Whether to handle SQL errors. Defaults to True. sql_only (bool) : Whether to get only sql and not the sql query result. @@ -358,7 +353,6 @@ def __init__( sql_parser_mode: SQLParserMode = SQLParserMode.DEFAULT, llm: Optional[LLM] = None, embed_model: Optional[BaseEmbedding] = None, - service_context: Optional[ServiceContext] = None, return_raw: bool = True, handle_sql_errors: bool = True, sql_only: bool = False, @@ -366,6 +360,8 @@ def __init__( verbose: bool = False, **kwargs: Any, ) -> None: + super().__init__() + """Initialize params.""" self._sql_retriever = MySQLRetriever(sql_database, return_raw=return_raw) self._sql_database = sql_database @@ -375,20 +371,18 @@ def __init__( self._tables = tables self._dialect = dialect self._context_str_prefix = context_str_prefix - self._llm = llm or llm_from_settings_or_context(Settings, service_context) + self._llm = llm or Settings.llm self._text_to_sql_prompt = text_to_sql_prompt or DEFAULT_TEXT_TO_SQL_TMPL self._sql_parser_mode = sql_parser_mode - embed_model = embed_model or embed_model_from_settings_or_context( - Settings, service_context - ) + embed_model = embed_model or Settings.embed_model self._sql_parser = self._load_sql_parser(sql_parser_mode, embed_model) self._handle_sql_errors = handle_sql_errors self._sql_only = sql_only self._verbose = verbose # super().__init__( # callback_manager=callback_manager - # or callback_manager_from_settings_or_context(Settings, service_context) + # or Settings.callback_manager # ) @classmethod diff --git a/src/pai_rag/integrations/data_analysis/pandas_instruction_parser.py b/src/pai_rag/integrations/data_analysis/pandas_instruction_parser.py new file mode 100644 index 00000000..000cef4c --- /dev/null +++ b/src/pai_rag/integrations/data_analysis/pandas_instruction_parser.py @@ -0,0 +1,273 @@ +"""Pandas output parser.""" + +import logging +import ast +import copy +from types import CodeType, ModuleType +from typing import Any, Dict, Optional, Mapping, Sequence, Union +import numpy as np +import pandas as pd +from llama_index.core.output_parsers.base import ChainableOutputParser +from llama_index.core.output_parsers.utils import parse_code_markdown + +logger = logging.getLogger(__name__) + + +ALLOWED_IMPORTS = { + "math", + "time", + "datetime", + "pandas", + "scipy", + "numpy", + "matplotlib", + "plotly", + "seaborn", +} + + +def _restricted_import( + name: str, + globals: Union[Mapping[str, object], None] = None, + locals: Union[Mapping[str, object], None] = None, + fromlist: Sequence[str] = (), + level: int = 0, +) -> ModuleType: + if name in ALLOWED_IMPORTS: + return __import__(name, globals, locals, fromlist, level) + raise ImportError(f"Import of module '{name}' is not allowed") + + +ALLOWED_BUILTINS = { + "abs": abs, + "all": all, + "any": any, + "ascii": ascii, + "bin": bin, + "bool": bool, + "bytearray": bytearray, + "bytes": bytes, + "chr": chr, + "complex": complex, + "divmod": divmod, + "enumerate": enumerate, + "filter": filter, + "float": float, + "format": format, + "frozenset": frozenset, + "hash": hash, + "hex": hex, + "int": int, + "isinstance": isinstance, + "issubclass": issubclass, + "len": len, + "list": list, + "map": map, + "max": max, + "min": min, + "oct": oct, + "ord": ord, + "pow": pow, + "print": print, + "range": range, + "repr": repr, + "reversed": reversed, + "round": round, + "set": set, + "slice": slice, + "sorted": sorted, + "str": str, + "sum": sum, + "tuple": tuple, + "type": type, + "zip": zip, + # Constants + "True": True, + "False": False, + "None": None, + "__import__": _restricted_import, +} + + +def _get_restricted_globals(__globals: Union[dict, None]) -> Any: + restricted_globals = copy.deepcopy(ALLOWED_BUILTINS) + if __globals: + restricted_globals.update(__globals) + return restricted_globals + + +vulnerable_code_snippets = [ + "os.", +] + + +class DunderVisitor(ast.NodeVisitor): + def __init__(self) -> None: + self.has_access_to_private_entity = False + self.has_access_to_disallowed_builtin = False + + builtins = globals()["__builtins__"].keys() + self._builtins = builtins + + def visit_Name(self, node: ast.Name) -> None: + if node.id.startswith("_"): + self.has_access_to_private_entity = True + if node.id not in ALLOWED_BUILTINS and node.id in self._builtins: + self.has_access_to_disallowed_builtin = True + self.generic_visit(node) + + def visit_Attribute(self, node: ast.Attribute) -> None: + if node.attr.startswith("_"): + self.has_access_to_private_entity = True + if node.attr not in ALLOWED_BUILTINS and node.attr in self._builtins: + self.has_access_to_disallowed_builtin = True + self.generic_visit(node) + + +def _contains_protected_access(code: str) -> bool: + # do not allow imports + imports_modules = False + tree = ast.parse(code) + for node in ast.iter_child_nodes(tree): + if isinstance(node, ast.Import): + imports_modules = True + elif isinstance(node, ast.ImportFrom): + imports_modules = True + else: + continue + + dunder_visitor = DunderVisitor() + dunder_visitor.visit(tree) + + for vulnerable_code_snippet in vulnerable_code_snippets: + if vulnerable_code_snippet in code: + dunder_visitor.has_access_to_disallowed_builtin = True + + return ( + dunder_visitor.has_access_to_private_entity + or dunder_visitor.has_access_to_disallowed_builtin + or imports_modules + ) + + +def _verify_source_safety(__source: Union[str, bytes, CodeType]) -> None: + """ + Verify that the source is safe to execute. For now, this means that it + does not contain any references to private or dunder methods. + """ + if isinstance(__source, CodeType): + raise RuntimeError("Direct execution of CodeType is forbidden!") + if isinstance(__source, bytes): + __source = __source.decode() + if _contains_protected_access(__source): + raise RuntimeError( + "Execution of code containing references to private or dunder methods, " + "disallowed builtins, or any imports, is forbidden!" + ) + + +def safe_eval( + __source: Union[str, bytes, CodeType], + __globals: Union[Dict[str, Any], None] = None, + __locals: Union[Mapping[str, object], None] = None, +) -> Any: + """ + eval within safe global context. + """ + _verify_source_safety(__source) + return eval(__source, _get_restricted_globals(__globals), __locals) + + +def safe_exec( + __source: Union[str, bytes, CodeType], + __globals: Union[Dict[str, Any], None] = None, + __locals: Union[Mapping[str, object], None] = None, +) -> None: + """ + eval within safe global context. + """ + _verify_source_safety(__source) + return exec(__source, _get_restricted_globals(__globals), __locals) + + +def default_output_processor( + output: str, df: pd.DataFrame, **output_kwargs: Any +) -> str: + """Process outputs in a default manner.""" + import ast + import sys + import traceback + + if sys.version_info < (3, 9): + logger.warning( + "Python version must be >= 3.9 in order to use " + "the default output processor, which executes " + "the Python query. Instead, we will return the " + "raw Python instructions as a string." + ) + return output + + local_vars = {"df": df, "pd": pd} + global_vars = {"np": np} + + output = parse_code_markdown(output, only_last=True)[0] + + # NOTE: inspired from langchain's tool + # see langchain.tools.python.tool (PythonAstREPLTool) + try: + tree = ast.parse(output) + module = ast.Module(tree.body[:-1], type_ignores=[]) + safe_exec(ast.unparse(module), {}, local_vars) # type: ignore + module_end = ast.Module(tree.body[-1:], type_ignores=[]) + module_end_str = ast.unparse(module_end) # type: ignore + if module_end_str.strip("'\"") != module_end_str: + # if there's leading/trailing quotes, then we need to eval + # string to get the actual expression + module_end_str = safe_eval(module_end_str, global_vars, local_vars) + try: + # str(pd.dataframe) will truncate output by display.max_colwidth + # set width temporarily to extract more text + current_max_colwidth = pd.get_option("display.max_colwidth") + current_max_rows = pd.get_option("display.max_rows") + current_max_columns = pd.get_option("display.max_columns") + if "max_colwidth" in output_kwargs: + pd.set_option("display.max_colwidth", output_kwargs["max_colwidth"]) + if "max_rows" in output_kwargs: + pd.set_option("display.max_rows", output_kwargs["max_rows"]) + if "max_columns" in output_kwargs: + pd.set_option("display.max_columns", output_kwargs["max_columns"]) + output_str = str(safe_eval(module_end_str, global_vars, local_vars)) + pd.set_option("display.max_colwidth", current_max_colwidth) + pd.set_option("display.max_rows", current_max_rows) + pd.set_option("display.max_columns", current_max_columns) + return output_str + + except Exception: + raise + except Exception as e: + err_string = ( + "There was an error running the output as Python code. " + f"Error message: {e}" + ) + traceback.print_exc() + return err_string + + +class PandasInstructionParser(ChainableOutputParser): + """Pandas instruction parser. + + This 'output parser' takes in pandas instructions (in Python code) and + executes them to return an output. + + """ + + def __init__( + self, df: pd.DataFrame, output_kwargs: Optional[Dict[str, Any]] = None + ) -> None: + """Initialize params.""" + self.df = df + self.output_kwargs = output_kwargs or {} + + def parse(self, output: str) -> Any: + """Parse, validate, and correct errors programmatically.""" + return default_output_processor(output, self.df, **self.output_kwargs) diff --git a/src/pai_rag/integrations/embeddings/pai/pai_embedding.py b/src/pai_rag/integrations/embeddings/pai/pai_embedding.py index 5cfb3b74..dc64c0e6 100644 --- a/src/pai_rag/integrations/embeddings/pai/pai_embedding.py +++ b/src/pai_rag/integrations/embeddings/pai/pai_embedding.py @@ -1,7 +1,6 @@ from typing import Any, Callable, List, Optional from llama_index.core.base.embeddings.base import BaseEmbedding, Embedding -from llama_index.core.constants import DEFAULT_EMBED_BATCH_SIZE -from llama_index.core.bridge.pydantic import Field, PrivateAttr +from llama_index.core.bridge.pydantic import PrivateAttr from llama_index.core.schema import BaseNode, MetadataMode, ImageNode from loguru import logger @@ -15,7 +14,6 @@ class PaiEmbedding(BaseEmbedding): """PAI embedding model""" - _embed_batch_size: int = Field(default=DEFAULT_EMBED_BATCH_SIZE, gt=0) _embed_model: Any = PrivateAttr() _config: Any = PrivateAttr() @@ -23,14 +21,15 @@ def __init__( self, embed_config: PaiBaseEmbeddingConfig, ): - self._config = embed_config - self._embed_model = create_embedding(embed_config) - + embed_model = create_embedding(embed_config) super().__init__( - model_name=self._embed_model.model_name, - embed_batch_size=self._embed_model.embed_batch_size, - callback_manager=self._embed_model.callback_manager, + model_name=embed_model.model_name, + embed_batch_size=embed_model.embed_batch_size, + callback_manager=embed_model.callback_manager, ) + self._config = embed_config + self._embed_model = embed_model + logger.info( f""" PaiEmbedding created with config: diff --git a/src/pai_rag/integrations/embeddings/pai/pai_multimodal_embedding.py b/src/pai_rag/integrations/embeddings/pai/pai_multimodal_embedding.py index 2cc36bf0..43bc284b 100644 --- a/src/pai_rag/integrations/embeddings/pai/pai_multimodal_embedding.py +++ b/src/pai_rag/integrations/embeddings/pai/pai_multimodal_embedding.py @@ -2,8 +2,7 @@ from typing import Any, Callable, List, Optional from llama_index.core.embeddings import MultiModalEmbedding from llama_index.core.base.embeddings.base import Embedding -from llama_index.core.constants import DEFAULT_EMBED_BATCH_SIZE -from llama_index.core.bridge.pydantic import Field, PrivateAttr +from llama_index.core.bridge.pydantic import PrivateAttr from llama_index.core.schema import ImageType, BaseNode, ImageNode from loguru import logger from pai_rag.integrations.embeddings.pai.pai_embedding_config import ( @@ -15,7 +14,6 @@ class PaiMultiModalEmbedding(MultiModalEmbedding): """PAI multimodal embedding model""" - _embed_batch_size: int = Field(default=DEFAULT_EMBED_BATCH_SIZE, gt=0) _embed_model: Any = PrivateAttr() _config: Any = PrivateAttr() @@ -23,14 +21,15 @@ def __init__( self, multimodal_embed_config: PaiBaseEmbeddingConfig, ): - self._config = multimodal_embed_config - self._embed_model = create_embedding(multimodal_embed_config) + embed_model = create_embedding(multimodal_embed_config) super().__init__( - model_name=self._embed_model.model_name, - embed_batch_size=self._embed_model.embed_batch_size, - callback_manager=self._embed_model.callback_manager, + model_name=embed_model.model_name, + embed_batch_size=embed_model.embed_batch_size, + callback_manager=embed_model.callback_manager, ) + self._config = multimodal_embed_config + self._embed_model = embed_model logger.info( f""" PaiMultiModalEmbedding Module created with config: diff --git a/src/pai_rag/integrations/index/pai/local/local_bm25_retriever.py b/src/pai_rag/integrations/index/pai/local/local_bm25_retriever.py index 7f936a14..0f65fa33 100644 --- a/src/pai_rag/integrations/index/pai/local/local_bm25_retriever.py +++ b/src/pai_rag/integrations/index/pai/local/local_bm25_retriever.py @@ -17,8 +17,6 @@ def __init__( object_map: Optional[dict] = None, verbose: bool = False, ) -> None: - self._similarity_top_k = similarity_top_k - self.bm25_index = bm25_index super().__init__( callback_manager=callback_manager, object_map=object_map, @@ -26,6 +24,9 @@ def __init__( verbose=verbose, ) + self._similarity_top_k = similarity_top_k + self.bm25_index = bm25_index + @classmethod def from_defaults( cls, diff --git a/src/pai_rag/integrations/index/pai/multimodal/multimodal_index.py b/src/pai_rag/integrations/index/pai/multimodal/multimodal_index.py index 0c9c2856..3e8e128d 100644 --- a/src/pai_rag/integrations/index/pai/multimodal/multimodal_index.py +++ b/src/pai_rag/integrations/index/pai/multimodal/multimodal_index.py @@ -25,8 +25,7 @@ from llama_index.core.multi_modal_llms import MultiModalLLM from llama_index.core.query_engine.multi_modal import SimpleMultiModalQueryEngine from llama_index.core.schema import BaseNode, ImageNode -from llama_index.core.service_context import ServiceContext -from llama_index.core.settings import Settings, llm_from_settings_or_context +from llama_index.core.settings import Settings from llama_index.core.storage.storage_context import StorageContext from llama_index.core.vector_stores.simple import ( DEFAULT_VECTOR_STORE, @@ -67,11 +66,22 @@ def __init__( # keep image_vector_store here for backward compatibility image_vector_store: Optional[BasePydanticVectorStore] = None, image_embed_model: EmbedType = "clip:ViT-B/32", - # deprecated - service_context: Optional[ServiceContext] = None, **kwargs: Any, ) -> None: """Initialize params.""" + storage_context = storage_context or StorageContext.from_defaults() + + super().__init__( + nodes=nodes, + index_struct=index_struct, + embed_model=embed_model, + storage_context=storage_context, + show_progress=show_progress, + use_async=use_async, + store_nodes_override=store_nodes_override, + **kwargs, + ) + self._enable_multimodal = enable_multimodal if self._enable_multimodal: image_embed_model = resolve_embed_model( @@ -99,20 +109,6 @@ def __init__( self.image_namespace ] - storage_context = storage_context or StorageContext.from_defaults() - - super().__init__( - nodes=nodes, - index_struct=index_struct, - embed_model=embed_model, - service_context=service_context, - storage_context=storage_context, - show_progress=show_progress, - use_async=use_async, - store_nodes_override=store_nodes_override, - **kwargs, - ) - @property def image_vector_store(self) -> BasePydanticVectorStore: return self._image_vector_store @@ -136,7 +132,7 @@ def as_query_engine( ) -> SimpleMultiModalQueryEngine: retriever = cast(PaiMultiModalVectorIndexRetriever, self.as_retriever(**kwargs)) - llm = llm or llm_from_settings_or_context(Settings, self._service_context) + llm = llm or Settings.llm assert isinstance(llm, MultiModalLLM) return SimpleMultiModalQueryEngine( @@ -151,7 +147,6 @@ def from_vector_store( vector_store: BasePydanticVectorStore, embed_model: Optional[EmbedType] = None, # deprecated - service_context: Optional[ServiceContext] = None, # Image-related kwargs image_vector_store: Optional[BasePydanticVectorStore] = None, image_embed_model: EmbedType = "clip", @@ -168,7 +163,6 @@ def from_vector_store( return cls( nodes=[], - service_context=service_context, storage_context=storage_context, image_embed_model=image_embed_model, embed_model=( diff --git a/src/pai_rag/integrations/index/pai/multimodal/multimodal_retriever.py b/src/pai_rag/integrations/index/pai/multimodal/multimodal_retriever.py index a0944509..6a9b4c37 100644 --- a/src/pai_rag/integrations/index/pai/multimodal/multimodal_retriever.py +++ b/src/pai_rag/integrations/index/pai/multimodal/multimodal_retriever.py @@ -23,10 +23,7 @@ QueryType, ImageNode, ) -from llama_index.core.settings import ( - Settings, - callback_manager_from_settings_or_context, -) +from llama_index.core.settings import Settings from llama_index.core.vector_stores.types import ( MetadataFilters, BasePydanticVectorStore, @@ -79,6 +76,8 @@ def __init__( callback_manager: Optional[CallbackManager] = None, **kwargs: Any, ) -> None: + super().__init__(callback_manager=callback_manager or Settings.callback_manager) + """Initialize params.""" self._index = index self._vector_store = self._index.vector_store @@ -94,7 +93,6 @@ def __init__( self._image_embed_model = index._image_embed_model self._embed_model = index._embed_model - self._service_context = self._index.service_context self._docstore = self._index.docstore self._similarity_top_k = similarity_top_k @@ -120,12 +118,6 @@ def __init__( ] self._kwargs: Dict[str, Any] = kwargs.get("vector_store_kwargs", {}) - self.callback_manager = ( - callback_manager - or callback_manager_from_settings_or_context( - Settings, self._service_context - ) - ) @property def similarity_top_k(self) -> int: diff --git a/src/pai_rag/integrations/index/pai/vector_store_config.py b/src/pai_rag/integrations/index/pai/vector_store_config.py index 0219817f..36622394 100644 --- a/src/pai_rag/integrations/index/pai/vector_store_config.py +++ b/src/pai_rag/integrations/index/pai/vector_store_config.py @@ -50,7 +50,7 @@ class AnalyticDBVectorStoreConfig(BaseVectorStoreConfig): ] = SupportedVectorStoreType.analyticdb ak: str sk: str - region_id: str + region_id: str = "cn-hangzhou" instance_id: str account: str account_password: str diff --git a/src/pai_rag/integrations/postprocessor/my_model_based_reranker.py b/src/pai_rag/integrations/postprocessor/my_model_based_reranker.py index 52ff376c..0e3c5c5f 100644 --- a/src/pai_rag/integrations/postprocessor/my_model_based_reranker.py +++ b/src/pai_rag/integrations/postprocessor/my_model_based_reranker.py @@ -41,17 +41,18 @@ def __init__( "Cannot import FlagReranker package, please install it: ", "pip install git+https://github.com/FlagOpen/FlagEmbedding.git", ) - self._model = FlagReranker( - model, - use_fp16=use_fp16, - ) - callback_manager = callback_manager or Settings.callback_manager + super().__init__( top_n=top_n, model=model, similarity_threshold=similarity_threshold, use_fp16=use_fp16, - callback_manager=callback_manager, + callback_manager=callback_manager or Settings.callback_manager, + ) + + self._model = FlagReranker( + model, + use_fp16=use_fp16, ) @classmethod diff --git a/src/pai_rag/integrations/postprocessor/pai/pai_postprocessor.py b/src/pai_rag/integrations/postprocessor/pai/pai_postprocessor.py index 0f40abbf..7b0fd4ef 100644 --- a/src/pai_rag/integrations/postprocessor/pai/pai_postprocessor.py +++ b/src/pai_rag/integrations/postprocessor/pai/pai_postprocessor.py @@ -80,8 +80,8 @@ def __init__( self, postprocessor_config: BasePostProcessorConfig, ): - self._postprocessors = create_postprocessors(postprocessor_config) super().__init__() + self._postprocessors = create_postprocessors(postprocessor_config) @classmethod def class_name(cls) -> str: diff --git a/src/pai_rag/integrations/query_engine/pai_retriever_query_engine.py b/src/pai_rag/integrations/query_engine/pai_retriever_query_engine.py index 8c18d7d9..63b2df07 100644 --- a/src/pai_rag/integrations/query_engine/pai_retriever_query_engine.py +++ b/src/pai_rag/integrations/query_engine/pai_retriever_query_engine.py @@ -42,8 +42,6 @@ def __init__( transform_metadata: Optional[dict] = None, callback_manager: Optional[CallbackManager] = None, ) -> None: - self._query_transform = query_transform - self._transform_metadata = transform_metadata super().__init__( retriever=retriever, response_synthesizer=response_synthesizer, @@ -51,6 +49,9 @@ def __init__( callback_manager=callback_manager, ) + self._query_transform = query_transform + self._transform_metadata = transform_metadata + def retrieve(self, query_bundle: QueryBundle) -> List[NodeWithScore]: if self._query_transform: query_bundle = self._query_transform.run( diff --git a/src/pai_rag/integrations/search/bs4_reader.py b/src/pai_rag/integrations/search/bs4_reader.py index 0ef839f9..da45e6ff 100644 --- a/src/pai_rag/integrations/search/bs4_reader.py +++ b/src/pai_rag/integrations/search/bs4_reader.py @@ -174,8 +174,8 @@ class ParallelBeautifulSoupWebReader(BasePydanticReader): _website_extractor: Dict[str, Callable] = PrivateAttr() def __init__(self, website_extractor: Optional[Dict[str, Callable]] = None) -> None: - self._website_extractor = website_extractor or DEFAULT_WEBSITE_EXTRACTOR super().__init__() + self._website_extractor = website_extractor or DEFAULT_WEBSITE_EXTRACTOR @classmethod def class_name(cls) -> str: diff --git a/src/pai_rag/integrations/vector_stores/elasticsearch/my_elasticsearch.py b/src/pai_rag/integrations/vector_stores/elasticsearch/my_elasticsearch.py index 8c378dc2..4cfe785f 100644 --- a/src/pai_rag/integrations/vector_stores/elasticsearch/my_elasticsearch.py +++ b/src/pai_rag/integrations/vector_stores/elasticsearch/my_elasticsearch.py @@ -221,8 +221,6 @@ def __init__( ) -> None: nest_asyncio.apply() - self._local_storage = threading.local() - if retrieval_strategy is None: retrieval_strategy = AsyncDenseVectorStrategy( distance=DistanceMetric[distance_strategy] @@ -243,6 +241,9 @@ def __init__( distance_strategy=distance_strategy, retrieval_strategy=retrieval_strategy, ) + + self._local_storage = threading.local() + asyncio.get_event_loop().run_until_complete( self._get_store()._create_index_if_not_exists() ) diff --git a/src/pai_rag/integrations/vector_stores/postgresql/postgresql.py b/src/pai_rag/integrations/vector_stores/postgresql/postgresql.py index f8b13f65..14355264 100644 --- a/src/pai_rag/integrations/vector_stores/postgresql/postgresql.py +++ b/src/pai_rag/integrations/vector_stores/postgresql/postgresql.py @@ -2,6 +2,7 @@ import re from typing import Any, List, NamedTuple, Optional, Type, Union from urllib.parse import quote_plus +from sqlalchemy.sql.selectable import Select import asyncpg # noqa import pgvector # noqa @@ -144,10 +145,8 @@ class PGVectorStore(BasePydanticVectorStore): ``` """ - from sqlalchemy.sql.selectable import Select - - stores_text = True - flat_metadata = False + stores_text: bool = True + flat_metadata: bool = False connection_string: str async_connection_string: Union[str, sqlalchemy.engine.URL] @@ -194,6 +193,20 @@ def __init__( "a text search configuration specification." ) + super().__init__( + connection_string=connection_string, + async_connection_string=async_connection_string, + table_name=table_name, + schema_name=schema_name, + hybrid_search=hybrid_search, + text_search_config=text_search_config, + embed_dim=embed_dim, + cache_ok=cache_ok, + perform_setup=perform_setup, + debug=debug, + use_jsonb=use_jsonb, + ) + from sqlalchemy.orm import declarative_base # sqlalchemy model @@ -209,20 +222,6 @@ def __init__( use_jsonb=use_jsonb, ) - super().__init__( - connection_string=connection_string, - async_connection_string=async_connection_string, - table_name=table_name, - schema_name=schema_name, - hybrid_search=hybrid_search, - text_search_config=text_search_config, - embed_dim=embed_dim, - cache_ok=cache_ok, - perform_setup=perform_setup, - debug=debug, - use_jsonb=use_jsonb, - ) - async def close(self) -> None: if not self._is_initialized: return diff --git a/tests/index/test_pai_bm25_index.py b/tests/index/test_pai_bm25_index.py index 6320d688..4abb28de 100644 --- a/tests/index/test_pai_bm25_index.py +++ b/tests/index/test_pai_bm25_index.py @@ -18,7 +18,7 @@ def test_bm25(): bm25 = LocalBm25IndexStore(persist_path) - nodes = [TextNode(id_=i, text=text) for i, text in enumerate(texts)] + nodes = [TextNode(id_=f"node_{i}", text=text) for i, text in enumerate(texts)] bm25.add_docs(nodes) nodes_with_score = bm25.query("模型开发") diff --git a/tests/integrations/test_nl2pandas_retriever.py b/tests/integrations/test_nl2pandas_retriever.py index fbd67b55..32285128 100644 --- a/tests/integrations/test_nl2pandas_retriever.py +++ b/tests/integrations/test_nl2pandas_retriever.py @@ -13,8 +13,9 @@ ) -llm = DashScope(model_name="qwen-max", temperature=0.1) -embed_model = DashScopeEmbedding(embed_batch_size=10) +dashscope_key = os.environ.get("DASHSCOPE_API_KEY") +llm = DashScope(model_name="qwen-max", temperature=0.1, api_key=dashscope_key) +embed_model = DashScopeEmbedding(embed_batch_size=10, api_key=dashscope_key) Settings.llm = llm Settings.embed_model = embed_model diff --git a/tests/integrations/test_nl2sql_retriever.py b/tests/integrations/test_nl2sql_retriever.py index 7ab9d584..11626e03 100644 --- a/tests/integrations/test_nl2sql_retriever.py +++ b/tests/integrations/test_nl2sql_retriever.py @@ -17,8 +17,9 @@ load_dotenv() -llm = DashScope(model_name="qwen-max", temperature=0.1) -embed_model = DashScopeEmbedding(embed_batch_size=10) +dashscope_key = os.environ.get("DASHSCOPE_API_KEY") +llm = DashScope(model_name="qwen-max", temperature=0.1, api_key=dashscope_key) +embed_model = DashScopeEmbedding(embed_batch_size=10, api_key=dashscope_key) Settings.llm = llm Settings.embed_model = embed_model diff --git a/tests/integrations/test_nodes_enhancement.py b/tests/integrations/test_nodes_enhancement.py index 3770f8c7..122f77d6 100644 --- a/tests/integrations/test_nodes_enhancement.py +++ b/tests/integrations/test_nodes_enhancement.py @@ -21,7 +21,7 @@ async def test_enhance_nodes(): DEFAULT_EMBED_BATCH_SIZE = 10 # set embedding - llm = DashScope(model_name="qwen-turbo", temperature=0.1) + llm = DashScope(model_name="qwen-turbo", temperature=0.1, api_key=DASHSCOPE_API_KEY) embed_model = DashScopeEmbedding( api_key=DASHSCOPE_API_KEY, embed_batch_size=DEFAULT_EMBED_BATCH_SIZE )