Scripts are from P454 peptide study, part of CyaA protein:
-Depth insertion : mesure of distance between COM of the peptide and COM of the membrane , and statistical analysis
-center_protein.ipynb : prepare files for membrane curvature studies
-MDA_membrane_curvature.ipynb : use of MDAnalysis to generate membrane curvatures 2D maps
-generate_restraints.py : used for the parametrization of the flat bottom potential