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ChemTools

A series of tools that I developed, or adapted from others' work during my time as a research assistant in the Zwijnenburg Research Group at UCL and a PhD student at the University of Warwick.

  • Conformer Search (with ETKDG from RDKit)
  • Visualisation tool for of IP and EA values
  • SGE submission scripts and data collection for xTB IPEA calculations
  • XYZ_Concat: XYZ File concatenator
  • TbmIPEA: determine IP, EA, and optical gap from TurboMole DFT calculations
  • VASP: A collection of tools for running various calculations in VASP, inlcuding
    • ase_calc.py, a simple script for running calculations which require parameters on a per-atom basis
    • XANES: an approach to setting up XANES calculations for periodic systems