Notebooks to reproduce the results from "Learning Boolean controls in regulatedmetabolic networks: a case-study" by Thuillier et al.
They can be visualized at https://nbviewer.jupyter.org/github/bioasp/boolean-caspo-flux/tree/main/.
They can be executed within the provided Docker environment:
- online (without any installation), using
- or locally, provided Docker is installed:
docker build -t boolean-caspo-flux .
docker run -it --rm -p 8888:8888 -v $PWD:/notebook boolean-caspo-flux
then point your browser to http://127.0.0.1:8888.