From 4d2812ffa2da20021683750d234929f4da15d290 Mon Sep 17 00:00:00 2001 From: WardDeb Date: Wed, 22 Jan 2025 09:43:20 +0100 Subject: [PATCH] no more 2s, entrypoints point to new execs --- pyproject.toml | 20 ++++++++++---------- 1 file changed, 10 insertions(+), 10 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index 14f5902480..0db3966f4a 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -62,20 +62,20 @@ repository = "https://github.com/deeptools/deepTools" packages = ["deeptools"] [project.scripts] -alignmentSieve = "deeptools.alignmentSieve:main" -bamCompare = "deeptools.bamCompare:main" -bamCoverage = "deeptools.bamCoverage:main" +#alignmentSieve = "deeptools.alignmentSieve:main" +#bamCompare = "deeptools.bamCompare:main" +#bamCoverage = "deeptools.bamCoverage:main" bamPEFragmentSize = "deeptools.bamPEFragmentSize:main" bigwigAverage = "deeptools.bigwigAverage:main" bigwigCompare = "deeptools.bigwigCompare:main" computeGCBias = "deeptools.computeGCBias:main" -computeMatrix = "deeptools.computeMatrix:main" +#computeMatrix = "deeptools.computeMatrix:main" computeMatrixOperations = "deeptools.computeMatrixOperations:main" correctGCBias = "deeptools.correctGCBias:main" deeptools = "deeptools.deeptools_list_tools:main" estimateReadFiltering = "deeptools.estimateReadFiltering:main" estimateScaleFactor = "deeptools.estimateScaleFactor:main" -multiBamSummary = "deeptools.multiBamSummary:main" +#multiBamSummary = "deeptools.multiBamSummary:main" multiBigwigSummary = "deeptools.multiBigwigSummary:main" plotCorrelation = "deeptools.plotCorrelation:main" plotCoverage = "deeptools.plotCoverage:main" @@ -84,8 +84,8 @@ plotFingerprint = "deeptools.plotFingerprint:main" plotHeatmap = "deeptools.plotHeatmap:main" plotPCA = "deeptools.plotPCA:main" plotProfile = "deeptools.plotProfile:main" -bamCoverage2 = "deeptools.bamCoverage2:main" -bamCompare2 = "deeptools.bamCompare2:main" -computeMatrix2 = "deeptools.computeMatrix2:main" -alignmentSieve2 = "deeptools.alignmentSieve2:main" -multiBamSummary2 = "deeptools.multiBamSummary2:main" \ No newline at end of file +bamCoverage = "deeptools.bamCoverage2:main" +bamCompare = "deeptools.bamCompare2:main" +computeMatrix = "deeptools.computeMatrix2:main" +alignmentSieve = "deeptools.alignmentSieve2:main" +multiBamSummary = "deeptools.multiBamSummary2:main" \ No newline at end of file