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chemPhys.html
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<!DOCTYPE html>
<html>
<head>
<title>Chemical Physics</title>
<style type="text/css">
body {
background-color: #FFFF00;
font-family: Verdana, sans-serif;
font-size: 12 px
}
</style>
<script type="text/javascript" src="functions.js"></script>
</head>
<body>
<h2>
Chemical Physics Topics
</h2>
<h3>
Essential Topics
</h3>
<ul>
<li> <a href="javascript:changeTo('chemPhys','statesRates')">Basics: States & Kinetics</a> </li>
<li> <a href="javascript:changeTo('chemPhys','massAction')">Basics: Mass-Action Kinetics</a> </li>
<li> <a href="javascript:changeTo('chemPhys','equil')">Equilibrium means Detailed Balance</a> </li>
<li> <a href="javascript:changeTo('chemPhys','cycles')">Cycles and constraints</a> </li>
<ul>
<li> <a href="javascript:changeTo('chemPhys','cycleLogic')">Cycle Logic</a> </li>
<li> <a href="javascript:changeTo('chemPhys','cycleLogicAdvanced')">Advanced Cycle Logic</a> </li>
</ul>
<li> <a href="javascript:changeTo('chemPhys','steady')">Non-equilibrium: Steady states</a> </li>
<li> Non-equilibrium: Spontaneous processes </li>
<li> <a href="javascript:changeTo('chemPhys','free')">Free energy is the energy available for work</a> </li>
<ul>
<li> <a href="javascript:changeTo('chemPhys','freeThermo')">Thermodynamic connection between free energy and work</a> </li>
</ul>
<li> Free energy and populations </li>
<li> Entropy: Simple picture </li>
</ul>
<h3>
Under the hood: Statistical Mechanics
</h3>
<ul>
<li> <a href="javascript:changeTo('chemPhys','idealGas')">Underpinnings of Mass Action: The Ideal Gas</a> </li>
<li> <a href="javascript:changeTo('chemPhys','ionsNernst')">The ideal gas in a field: Transmembrane ionic gradients</a> </li>
<li> Trajectories and ensembles </li>
<li> Equilibrium in the ensemble picture </li>
<li> Free energy and entropy </li>
<li> Non-equilibrium steady states </li>
<li> Rates from trajectories </li>
</ul>
</body>
</html>