python-pull-request.yml

name: Test PR

on:
  pull_request:
    types: [opened, synchronize, reopened]
  push:
    branches:
      - develop
  schedule:
    - cron: "9 2 * * 0" # at 9:02 on sunday
  workflow_dispatch:

env:
  UV_SYSTEM_PYTHON: 1

jobs:
  quality:
    uses: ecmwf-actions/reusable-workflows/.github/workflows/qa-precommit-run.yml@v2
    with:
      skip-hooks: "no-commit-to-branch"

  checks:
    strategy:
      fail-fast: false
      matrix:
        platform: ["ubuntu-latest", "macos-latest"]
        python-version: ["3.9", "3.10", "3.11"]
        install-mode: ${{ (github.event_name == 'schedule' || github.event_name == 'workflow_dispatch') && fromJSON('["all"]') || fromJSON('["local-changes", "all"]') }}


    runs-on: ${{ matrix.platform }}
    timeout-minutes: 60

    steps:
    - uses: actions/checkout@v3
      with:
        fetch-depth: 0

    - name: Set up Python ${{ matrix.python-version }}
      uses: astral-sh/setup-uv@v5
      with:
        python-version: ${{ matrix.python-version }}
        enable-cache: true

    - name: Install test dependencies
      run: |
        uv pip install pytest pytest-md pytest-emoji

    - name: Detect changed packages
      id: changed-packages
      run: |
        if [ "${{ github.event_name }}" == "pull_request" ]; then
          # For pull requests, compare with the PR base
          MERGE_BASE=$(git merge-base origin/${{ github.event.pull_request.base.ref }} ${{ github.event.pull_request.head.sha }})
          CHANGED_FILES=$(git diff --name-only $MERGE_BASE...${{ github.event.pull_request.head.sha }})
        elif [ "${{ github.event_name }}" == "push" ]; then
          # For pushes, compare with the previous commit
          CHANGED_FILES=$(git diff --name-only HEAD^ HEAD)
        else
          # For scheduled runs, check all files
          CHANGED_FILES=$(git ls-files '*.py')
        fi

        echo "Changed files:"
        echo "$CHANGED_FILES"

        echo "training_changed=$(echo "$CHANGED_FILES" | grep -q '^training/' && echo 'true' || echo 'false')" >> $GITHUB_OUTPUT
        echo "graphs_changed=$(echo "$CHANGED_FILES" | grep -q '^graphs/' && echo 'true' || echo 'false')" >> $GITHUB_OUTPUT
        echo "models_changed=$(echo "$CHANGED_FILES" | grep -q '^models/' && echo 'true' || echo 'false')" >> $GITHUB_OUTPUT
        echo "integration_changed=$(echo "$CHANGED_FILES" | grep -q '^tests/' && echo 'true' || echo 'false')" >> $GITHUB_OUTPUT

    - name: Install packages
      if: (steps.changed-packages.outputs.integration_changed == 'true' || steps.changed-packages.outputs.training_changed == 'true' || steps.changed-packages.outputs.graphs_changed == 'true' || steps.changed-packages.outputs.models_changed == 'true')
      run: |
        PACKAGES=""

        if [[ ${{ matrix.install-mode }} == 'local-changes' ]]; then
          # Install from local if changed, otherwise from PyPI
          if [[ ${{ steps.changed-packages.outputs.training_changed }} == 'true' ]]; then
            PACKAGES="$PACKAGES -e ./training[all,tests]"
          else
            PACKAGES="$PACKAGES anemoi-training[all,tests]"
          fi

          if [[ ${{ steps.changed-packages.outputs.graphs_changed }} == 'true' ]]; then
            PACKAGES="$PACKAGES -e ./graphs[all,tests]"
          else
            PACKAGES="$PACKAGES anemoi-graphs[all,tests]"
          fi

          if [[ ${{ steps.changed-packages.outputs.models_changed }} == 'true' ]]; then
            PACKAGES="$PACKAGES -e ./models[all,tests]"
          else
            PACKAGES="$PACKAGES anemoi-models[all,tests]"
          fi
        else
          # Install all packages from local
          PACKAGES="-e ./training[all,tests] -e ./graphs[all,tests] -e ./models[all,tests]"
        fi

        uv pip install $PACKAGES

    - name: Run pytest for training package
      if: matrix.install-mode == 'all' || steps.changed-packages.outputs.training_changed == 'true'
      uses: pavelzw/pytest-action@v2
      with:
        report-title: "Test report Anemoi Training (python ${{ matrix.python-version }} on ${{ matrix.platform }}, ${{ matrix.install-mode }} mode)"
        custom-pytest: uv run --frozen pytest ./training

    - name: Run pytest for graphs package
      if: matrix.install-mode == 'all' || steps.changed-packages.outputs.graphs_changed == 'true'
      uses: pavelzw/pytest-action@v2
      with:
        report-title: "Test report Anemoi Graphs (python ${{ matrix.python-version }} on ${{ matrix.platform }}, ${{ matrix.install-mode }} mode)"
        custom-pytest: uv run --frozen pytest ./graphs

    - name: Run pytest for models package
      if: matrix.install-mode == 'all' || steps.changed-packages.outputs.models_changed == 'true'
      uses: pavelzw/pytest-action@v2
      with:
        report-title: "Test report Anemoi Models (python ${{ matrix.python-version }} on ${{ matrix.platform }}, ${{ matrix.install-mode }} mode)"
        custom-pytest: uv run --frozen pytest ./models

    - name: Run integration tests
      if: success() && (steps.changed-packages.outputs.integration_changed == 'true' || steps.changed-packages.outputs.training_changed == 'true' || steps.changed-packages.outputs.graphs_changed == 'true' || steps.changed-packages.outputs.models_changed == 'true')
      uses: pavelzw/pytest-action@v2
      timeout-minutes: 30
      with:
        report-title: "Test report Anemoi Core Integration (python ${{ matrix.python-version }} on ${{ matrix.platform }}, ${{ matrix.install-mode }} mode)"
        custom-pytest: uv run --frozen pytest tests/