From bce44900d446356b33f4520ee89c131bcae2650b Mon Sep 17 00:00:00 2001 From: Tomas Pilar Date: Thu, 12 Dec 2024 10:19:26 +0100 Subject: [PATCH] chore(unstructured): upgrade & fix Signed-off-by: Tomas Pilar --- workers/python/poetry.lock | 624 ++++++++---------- workers/python/pyproject.toml | 4 +- workers/python/python/config.py | 2 - .../python/python/extraction/extraction.py | 2 +- .../python/python/extraction/unstructured.py | 6 +- 5 files changed, 295 insertions(+), 343 deletions(-) diff --git a/workers/python/poetry.lock b/workers/python/poetry.lock index 096dfed..540da1c 100644 --- a/workers/python/poetry.lock +++ b/workers/python/poetry.lock @@ -261,6 +261,20 @@ docs = ["cogapp", "furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphi tests = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"] tests-mypy = ["mypy (>=1.11.1)", "pytest-mypy-plugins"] +[[package]] +name = "autoflake" +version = "2.3.1" +description = "Removes unused imports and unused variables" +optional = false +python-versions = ">=3.8" +files = [ + {file = "autoflake-2.3.1-py3-none-any.whl", hash = "sha256:3ae7495db9084b7b32818b4140e6dc4fc280b712fb414f5b8fe57b0a8e85a840"}, + {file = "autoflake-2.3.1.tar.gz", hash = "sha256:c98b75dc5b0a86459c4f01a1d32ac7eb4338ec4317a4469515ff1e687ecd909e"}, +] + +[package.dependencies] +pyflakes = ">=3.0.0" + [[package]] name = "backoff" version = "2.2.1" @@ -771,86 +785,51 @@ files = [ marshmallow = ">=3.18.0,<4.0.0" typing-inspect = ">=0.4.0,<1" -[[package]] -name = "deepdiff" -version = "8.0.1" -description = "Deep Difference and Search of any Python object/data. 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+typing-inspect = ">=0.9.0,<0.10.0" [[package]] name = "unstructured-inference" @@ -5950,13 +5902,13 @@ transformers = ">=4.25.1" [[package]] name = "unstructured-ingest" -version = "0.2.2" +version = "0.3.8" description = "A library that prepares raw documents for downstream ML tasks." optional = false python-versions = "<3.13,>=3.9.0" files = [ - {file = "unstructured_ingest-0.2.2-py3-none-any.whl", hash = "sha256:48013ea051c64c8eb2834295b8fd7b9b12a1a2bb665faf56db4b873451fbf176"}, - {file = "unstructured_ingest-0.2.2.tar.gz", hash = "sha256:703c20eea5bb5c5363b4129cf5735f769c8180271cdebc1b99a033ef4f77e5a6"}, + {file = "unstructured_ingest-0.3.8-py3-none-any.whl", hash = "sha256:b4f3a706376df584636ddf324d93a1ed8f39c478528e7cef171609de17bd1adc"}, + {file = "unstructured_ingest-0.3.8.tar.gz", hash = "sha256:a0d7663ba6bdff81086f4d04b533366cb86665820a43f591849bbd5c4a8e5f9e"}, ] [package.dependencies] @@ -5974,7 +5926,7 @@ tqdm = "*" airtable = ["pyairtable"] astradb = ["astrapy"] azure = ["adlfs", "fsspec"] -azure-cognitive-search = ["azure-search-documents"] +azure-ai-search = ["azure-search-documents"] bedrock = ["boto3"] biomed = ["bs4", "requests"] box = ["boxfs", "fsspec"] @@ -5984,11 +5936,12 @@ confluence = ["atlassian-python-api", "requests"] couchbase = ["couchbase"] csv = ["unstructured[tsv]"] databricks-volumes = ["databricks-sdk"] -delta-table = ["deltalake", "fsspec"] +delta-table = ["boto3", "deltalake"] discord = ["discord-py"] doc = ["unstructured[docx]"] docx = ["unstructured[docx]"] dropbox = ["dropboxdrivefs", "fsspec"] +duckdb = ["duckdb"] elasticsearch = ["elasticsearch[async]"] embed-huggingface = ["sentence-transformers"] embed-mixedbreadai = ["mixedbread-ai"] @@ -6004,6 +5957,7 @@ hubspot = ["hubspot-api-client", "urllib3"] jira = ["atlassian-python-api"] kafka = ["confluent-kafka"] kdbai = ["kdbai-client (>=1.4.0)"] +lancedb = ["lancedb"] md = ["unstructured[md]"] milvus = ["pymilvus"] mongodb = ["pymongo"] @@ -6031,7 +5985,7 @@ sftp = ["fsspec", "paramiko"] sharepoint = ["Office365-REST-Python-Client", "msal"] singlestore = ["singlestoredb"] slack = ["slack-sdk[optional]"] -snowflake = ["snowflake-connector-python"] +snowflake = ["psycopg2-binary", "snowflake-connector-python"] togetherai = ["together"] tsv = ["unstructured[tsv]"] vectara = ["requests"] @@ -6301,4 +6255,4 @@ type = ["pytest-mypy"] [metadata] lock-version = "2.0" python-versions = "~3.11" -content-hash = "145875312503a26ccd0def15e00055b3edcc3d8556166c7065606615cce8305a" +content-hash = "b7c5999bf7bb5549653212da4a48285ca331b4aa8606c3cd7a5b9669e7ccf44d" diff --git a/workers/python/pyproject.toml b/workers/python/pyproject.toml index 83b200b..359d9b5 100644 --- a/workers/python/pyproject.toml +++ b/workers/python/pyproject.toml @@ -25,8 +25,8 @@ docling = "^2.9.0" optional = true [tool.poetry.group.unstructured.dependencies] -unstructured-ingest = {extras = ["s3"], version = "^0.2.1"} -unstructured = {extras = ["all-docs"], version = "^0.16.4"} +unstructured-ingest = {extras = ["s3"], version = "^0.3.8"} +unstructured = {extras = ["all-docs"], version = "^0.16.11"} [build-system] requires = ["poetry-core"] diff --git a/workers/python/python/config.py b/workers/python/python/config.py index fec37dd..a445f9a 100644 --- a/workers/python/python/config.py +++ b/workers/python/python/config.py @@ -42,8 +42,6 @@ def run_bullmq_workers(self) -> list[str]: mongodb_database_name: str mongodb_ca_cert: Optional[str] = None - extraction_backend: ExtractionBackend - unstructured_api_url: Optional[str] = None unstructured_api_key: Optional[str] = None diff --git a/workers/python/python/extraction/extraction.py b/workers/python/python/extraction/extraction.py index 4d0c310..1d029d6 100644 --- a/workers/python/python/extraction/extraction.py +++ b/workers/python/python/extraction/extraction.py @@ -47,7 +47,7 @@ async def processExtraction(job: Job, job_token): if backend == ExtractionBackend.UNSTRUCTURED_OPENSOURCE or backend == ExtractionBackend.UNSTRUCTURED_API: try: from extraction.unstructured import unstructuredExtraction - await unstructuredExtraction(file) + await unstructuredExtraction(file, backend) except ImportError: logger.exception( f"Unable to import unstructured, throwing away job {job.id}") diff --git a/workers/python/python/extraction/unstructured.py b/workers/python/python/extraction/unstructured.py index 45258c6..1052816 100644 --- a/workers/python/python/extraction/unstructured.py +++ b/workers/python/python/extraction/unstructured.py @@ -32,7 +32,7 @@ S3_URL = f"s3://{config.s3_bucket_file_storage}" -async def unstructuredExtraction(file): +async def unstructuredExtraction(file, backend): storage_id = file.get("storageId") if storage_id is None: raise RuntimeError("storageId not found") @@ -50,12 +50,12 @@ async def unstructuredExtraction(file): downloader_config=S3DownloaderConfig(), source_connection_config=s3_connection_config, partitioner_config=PartitionerConfig( - partition_by_api=config.extraction_backend == ExtractionBackend.UNSTRUCTURED_API, + partition_by_api=backend == ExtractionBackend.UNSTRUCTURED_API, partition_endpoint=config.unstructured_api_url, api_key=config.unstructured_api_key ), chunker_config=ChunkerConfig( - chunk_by_api=config.extraction_backend == ExtractionBackend.UNSTRUCTURED_API, + chunk_by_api=backend == ExtractionBackend.UNSTRUCTURED_API, chunking_endpoint=config.unstructured_api_url, chunk_api_key=config.unstructured_api_key, chunking_strategy="by_title",