-
Notifications
You must be signed in to change notification settings - Fork 1
/
Copy pathenvironment.yml
229 lines (229 loc) · 7.11 KB
/
environment.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
name: coloncancer
channels:
- bioconda
- conda-forge
- defaults
dependencies:
- aioeasywebdav=2.4.0=py38haa244fe_1001
- aiohttp=3.8.1=py38h294d835_1
- aiosignal=1.2.0=pyhd8ed1ab_0
- amply=0.1.5=pyhd8ed1ab_0
- appdirs=1.4.4=pyh9f0ad1d_0
- argon2-cffi=21.3.0=pyhd3eb1b0_0
- argon2-cffi-bindings=21.2.0=py38h2bbff1b_0
- asttokens=2.0.5=pyhd3eb1b0_0
- async-timeout=4.0.2=pyhd8ed1ab_0
- attmap=0.13.2=pyhd8ed1ab_0
- attrs=21.4.0=pyhd3eb1b0_0
- backcall=0.2.0=pyhd3eb1b0_0
- bcrypt=3.2.2=py38h294d835_0
- beautifulsoup4=4.11.1=py38haa95532_0
- bleach=4.1.0=pyhd3eb1b0_0
- boto3=1.24.66=pyhd8ed1ab_0
- botocore=1.27.67=pyhd8ed1ab_0
- brotlipy=0.7.0=py38h294d835_1004
- bzip2=1.0.8=h8ffe710_4
- ca-certificates=2022.6.15=h5b45459_0
- cachetools=5.2.0=pyhd8ed1ab_0
- certifi=2022.6.15=pyhd8ed1ab_1
- cffi=1.15.1=py38h2bbff1b_0
- charset-normalizer=2.1.1=pyhd8ed1ab_0
- colorama=0.4.5=py38haa95532_0
- commonmark=0.9.1=py_0
- conda=4.14.0=py38haa244fe_0
- conda-package-handling=1.8.1=py38h31c79cd_1
- configargparse=1.5.3=pyhd8ed1ab_0
- connection_pool=0.0.3=pyhd3deb0d_0
- cryptography=37.0.4=py38hb7941b4_0
- dataclasses=0.8=pyhc8e2a94_3
- datrie=0.8.2=py38h294d835_3
- debugpy=1.5.1=py38hd77b12b_0
- decorator=5.1.1=pyhd3eb1b0_0
- defusedxml=0.7.1=pyhd3eb1b0_0
- docutils=0.19=py38haa244fe_0
- dpath=2.0.6=py38haa244fe_1
- dropbox=11.34.0=pyhd8ed1ab_0
- entrypoints=0.4=py38haa95532_0
- executing=0.8.3=pyhd3eb1b0_0
- filechunkio=1.8=py_2
- filelock=3.8.0=pyhd8ed1ab_0
- frozenlist=1.3.1=py38h294d835_0
- ftputil=5.0.4=pyhd8ed1ab_0
- future=0.18.2=py38haa244fe_5
- gitdb=4.0.9=pyhd8ed1ab_0
- gitpython=3.1.27=pyhd8ed1ab_0
- glpk=5.0=h8ffe710_0
- google-api-core=2.10.0=pyhd8ed1ab_0
- google-api-python-client=2.60.0=pyhd8ed1ab_0
- google-auth=2.11.0=pyh6c4a22f_0
- google-auth-httplib2=0.1.0=pyhd8ed1ab_1
- google-cloud-core=2.3.2=pyhd8ed1ab_0
- google-cloud-storage=2.5.0=pyh6c4a22f_0
- google-crc32c=1.1.2=py38h554a69a_3
- google-resumable-media=2.3.3=pyhd8ed1ab_0
- googleapis-common-protos=1.56.4=py38h5b57dd5_0
- grpcio=1.46.3=py38he5377a8_0
- httplib2=0.20.4=pyhd8ed1ab_0
- idna=3.3=pyhd8ed1ab_0
- importlib-metadata=4.11.4=py38haa244fe_0
- importlib_resources=5.2.0=pyhd3eb1b0_1
- iniconfig=1.1.1=pyh9f0ad1d_0
- intel-openmp=2022.1.0=h57928b3_3787
- ipykernel=6.15.2=py38haa95532_0
- ipython=8.4.0=py38haa95532_0
- ipython_genutils=0.2.0=pyhd3eb1b0_1
- jedi=0.18.1=py38haa95532_1
- jinja2=3.0.3=pyhd3eb1b0_0
- jmespath=1.0.1=pyhd8ed1ab_0
- jsonschema=4.4.0=py38haa95532_0
- jupyter_client=7.3.4=py38haa95532_0
- jupyter_core=4.10.0=py38haa95532_0
- jupyterlab_pygments=0.1.2=py_0
- krb5=1.19.3=h1176d77_0
- libarchive=3.5.2=hb45042f_3
- libblas=3.9.0=16_win64_mkl
- libcblas=3.9.0=16_win64_mkl
- libcrc32c=1.1.2=h0e60522_0
- libcurl=7.83.1=h789b8ee_0
- libiconv=1.16=he774522_0
- liblapack=3.9.0=16_win64_mkl
- libmamba=0.25.0=h81a967f_2
- libmambapy=0.25.0=py38hf902ccc_2
- libprotobuf=3.21.1=h7755175_0
- libsodium=1.0.18=h62dcd97_0
- libsolv=0.7.22=h7755175_0
- libssh2=1.10.0=h680486a_3
- libxml2=2.9.14=hf5bbc77_4
- libzlib=1.2.12=h8ffe710_2
- logmuse=0.2.6=pyh8c360ce_0
- lz4-c=1.9.3=h8ffe710_1
- lzo=2.10=he774522_1000
- mamba=0.25.0=py38hecfeebb_2
- markupsafe=2.1.1=py38h2bbff1b_0
- matplotlib-inline=0.1.6=py38haa95532_0
- menuinst=1.4.19=py38haa244fe_0
- mistune=0.8.4=py38he774522_1000
- mkl=2022.1.0=h6a75c08_874
- multidict=6.0.2=py38h294d835_1
- nbclient=0.5.13=py38haa95532_0
- nbconvert=6.4.4=py38haa95532_0
- nbformat=5.3.0=py38haa95532_0
- nest-asyncio=1.5.5=py38haa95532_0
- notebook=6.4.12=py38haa95532_0
- numpy=1.23.2=py38h223ccf5_0
- oauth2client=4.1.3=py_0
- openssl=1.1.1q=h8ffe710_0
- packaging=21.3=pyhd3eb1b0_0
- pandocfilters=1.5.0=pyhd3eb1b0_0
- paramiko=2.11.0=pyhd8ed1ab_0
- parso=0.8.3=pyhd3eb1b0_0
- peppy=0.35.0=pyhd8ed1ab_0
- pickleshare=0.7.5=pyhd3eb1b0_1003
- pip=22.1.2=py38haa95532_0
- plac=1.3.5=pyhd8ed1ab_0
- pluggy=1.0.0=py38haa244fe_3
- ply=3.11=py_1
- prettytable=3.4.1=pyhd8ed1ab_0
- prometheus_client=0.14.1=py38haa95532_0
- prompt-toolkit=3.0.20=pyhd3eb1b0_0
- protobuf=4.21.1=py38haa244fe_0
- psutil=5.9.0=py38h2bbff1b_0
- pulp=2.6.0=py38haa244fe_1
- pure_eval=0.2.2=pyhd3eb1b0_0
- py=1.11.0=pyh6c4a22f_0
- pyasn1=0.4.8=py_0
- pyasn1-modules=0.2.7=py_0
- pybind11-abi=4=hd8ed1ab_3
- pycosat=0.6.3=py38h294d835_1010
- pycparser=2.21=pyhd3eb1b0_0
- pygments=2.11.2=pyhd3eb1b0_0
- pynacl=1.5.0=py38h31c79cd_1
- pyopenssl=22.0.0=pyhd8ed1ab_0
- pyparsing=3.0.9=py38haa95532_0
- pyrsistent=0.18.0=py38h196d8e1_0
- pysftp=0.2.9=py_1
- pysocks=1.7.1=pyh0701188_6
- pytest=7.1.3=py38haa244fe_0
- python=3.8.13=h6244533_0
- python-dateutil=2.8.2=pyhd3eb1b0_0
- python-fastjsonschema=2.16.2=py38haa95532_0
- python-irodsclient=1.1.4=pyhd8ed1ab_0
- python_abi=3.8=2_cp38
- pytz=2022.2.1=pyhd8ed1ab_0
- pyu2f=0.1.5=pyhd8ed1ab_0
- pywin32=302=py38h2bbff1b_2
- pywinpty=2.0.2=py38h5da7b33_0
- pyyaml=6.0=py38h294d835_4
- pyzmq=23.2.0=py38hd77b12b_0
- ratelimiter=1.2.0=py_1002
- reproc=14.2.3=h8ffe710_0
- reproc-cpp=14.2.3=h0e60522_0
- requests=2.28.1=pyhd8ed1ab_1
- retry=0.9.2=py_0
- rich=12.5.1=pyhd8ed1ab_0
- rsa=4.9=pyhd8ed1ab_0
- ruamel_yaml=0.15.80=py38h294d835_1007
- s3transfer=0.6.0=pyhd8ed1ab_0
- send2trash=1.8.0=pyhd3eb1b0_1
- setuptools=63.4.1=py38haa95532_0
- six=1.16.0=pyhd3eb1b0_1
- slacker=0.14.0=py_0
- smart_open=6.1.0=pyha770c72_1
- smmap=3.0.5=pyh44b312d_0
- snakemake=7.14.0=hdfd78af_0
- snakemake-minimal=7.14.0=pyhdfd78af_0
- soupsieve=2.3.1=pyhd3eb1b0_0
- sqlite=3.39.2=h2bbff1b_0
- stack_data=0.2.0=pyhd3eb1b0_0
- stone=3.3.1=pyhd8ed1ab_0
- stopit=1.1.2=py_0
- tabulate=0.8.10=pyhd8ed1ab_0
- tbb=2021.5.0=h2d74725_1
- terminado=0.13.1=py38haa95532_0
- testpath=0.6.0=py38haa95532_0
- tomli=2.0.1=pyhd8ed1ab_0
- toolz=0.12.0=pyhd8ed1ab_0
- toposort=1.7=pyhd8ed1ab_0
- tornado=6.1=py38h2bbff1b_0
- tqdm=4.64.1=pyhd8ed1ab_0
- traitlets=5.1.1=pyhd3eb1b0_0
- typing-extensions=4.3.0=py38haa95532_0
- typing_extensions=4.3.0=py38haa95532_0
- ubiquerg=0.6.2=pyhd8ed1ab_0
- uritemplate=4.1.1=pyhd8ed1ab_0
- urllib3=1.26.11=pyhd8ed1ab_0
- vc=14.2=h21ff451_1
- veracitools=0.1.3=py_0
- vs2015_runtime=14.27.29016=h5e58377_2
- wcwidth=0.2.5=pyhd3eb1b0_0
- webencodings=0.5.1=py38_1
- wheel=0.37.1=pyhd3eb1b0_0
- win_inet_pton=1.1.0=py38haa244fe_4
- wincertstore=0.2=py38haa95532_2
- winpty=0.4.3=4
- wrapt=1.14.1=py38h294d835_0
- xz=5.2.6=h8d14728_0
- yaml=0.2.5=h8ffe710_2
- yaml-cpp=0.7.0=h0e60522_1
- yarl=1.7.2=py38h294d835_2
- yte=1.5.1=py38haa244fe_0
- zeromq=4.3.4=hd77b12b_0
- zipp=3.8.0=py38haa95532_0
- zlib=1.2.12=h8ffe710_2
- zstd=1.5.2=h6255e5f_4
- pip:
- cycler==0.11.0
- fonttools==4.37.1
- impyute==0.0.8
- joblib==1.1.0
- kiwisolver==1.4.4
- matplotlib==3.5.3
- mlxtend==0.20.0
- pandas==1.4.4
- patsy==0.5.2
- pillow==9.2.0
- scikit-learn==1.1.2
- scipy==1.9.1
- seaborn==0.11.2
- statsmodels==0.13.2
- threadpoolctl==3.1.0