diff --git a/hippunfold/config/snakebids.yml b/hippunfold/config/snakebids.yml index 5ac42e30..08981135 100644 --- a/hippunfold/config/snakebids.yml +++ b/hippunfold/config/snakebids.yml @@ -251,7 +251,7 @@ parse_args: - 'laplace' - 'equivolume' default: - - 'equivolume' + - 'laplace' help: 'Method to use for laminar coordinates. Equivolume uses equivolumetric layering from Waehnert et al 2014 (Nighres implementation). (default: %(default)s)' --autotop_labels: diff --git a/hippunfold/workflow/envs/env2.yaml b/hippunfold/workflow/envs/env2.yaml index d0fa7468..03aaf131 100644 --- a/hippunfold/workflow/envs/env2.yaml +++ b/hippunfold/workflow/envs/env2.yaml @@ -4,4 +4,5 @@ channels: - defaults dependencies: - python=3.9 - - convert3d \ No newline at end of file + - convert3d + - libitk=5.4.0 \ No newline at end of file diff --git a/hippunfold/workflow/envs/env4.yaml b/hippunfold/workflow/envs/env4.yaml index 0196355d..68f6aa14 100644 --- a/hippunfold/workflow/envs/env4.yaml +++ b/hippunfold/workflow/envs/env4.yaml @@ -4,5 +4,4 @@ channels: - defaults dependencies: - python=3.9 - - ants=2.5.4 - - libitk=5.4.0 \ No newline at end of file + - ants=2.5.4 \ No newline at end of file diff --git a/hippunfold/workflow/envs/env7.yaml b/hippunfold/workflow/envs/env7.yaml index 796163e9..f4994cde 100644 --- a/hippunfold/workflow/envs/env7.yaml +++ b/hippunfold/workflow/envs/env7.yaml @@ -5,4 +5,5 @@ channels: dependencies: - python=3.9 - niftyreg - - convert3d \ No newline at end of file + - convert3d + - libitk=5.4.0 \ No newline at end of file