From 05bfc200e2a8d85b966c8c8808505fc793a9a1d5 Mon Sep 17 00:00:00 2001
From: Piotr <p.gramacki@gmail.com>
Date: Sun, 12 Mar 2023 21:42:43 +0100
Subject: [PATCH 01/16] chore: add GTFSDownloader, download catalog file for
 The Mobility Database

---
 examples/downloaders/gtfs_downloader.ipynb    | 43 ++++++++++++++++
 examples/loaders/gtfs_loader.ipynb            |  4 +-
 srai/downloaders/__init__.py                  |  5 ++
 srai/downloaders/gtfs_downloader.py           | 51 +++++++++++++++++++
 srai/utils/__init__.py                        |  2 +
 .../utils.py => srai/utils/download.py        | 11 ++--
 6 files changed, 110 insertions(+), 6 deletions(-)
 create mode 100644 examples/downloaders/gtfs_downloader.ipynb
 create mode 100644 srai/downloaders/__init__.py
 create mode 100644 srai/downloaders/gtfs_downloader.py
 rename examples/loaders/utils.py => srai/utils/download.py (69%)

diff --git a/examples/downloaders/gtfs_downloader.ipynb b/examples/downloaders/gtfs_downloader.ipynb
new file mode 100644
index 00000000..7f189361
--- /dev/null
+++ b/examples/downloaders/gtfs_downloader.ipynb
@@ -0,0 +1,43 @@
+{
+ "cells": [
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "from srai.downloaders import GTFSDownloader"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "downloader = GTFSDownloader()"
+   ]
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": ".venv",
+   "language": "python",
+   "name": "python3"
+  },
+  "language_info": {
+   "codemirror_mode": {
+    "name": "ipython",
+    "version": 3
+   },
+   "file_extension": ".py",
+   "mimetype": "text/x-python",
+   "name": "python",
+   "nbconvert_exporter": "python",
+   "pygments_lexer": "ipython3",
+   "version": "3.8.14"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 2
+}
diff --git a/examples/loaders/gtfs_loader.ipynb b/examples/loaders/gtfs_loader.ipynb
index 0b9cc614..6051e4c9 100644
--- a/examples/loaders/gtfs_loader.ipynb
+++ b/examples/loaders/gtfs_loader.ipynb
@@ -21,7 +21,7 @@
     "import numpy as np\n",
     "from shapely.geometry import Point\n",
     "from srai.utils.constants import WGS84_CRS\n",
-    "from utils import download"
+    "from srai.utils import download_file"
    ]
   },
   {
@@ -46,7 +46,7 @@
     "wroclaw_gtfs = Path().resolve() / \"files\" / \"example.zip\"\n",
     "gtfs_url = \"https://transitfeeds.com/p/mpk-wroc-aw/663/20221221/download\"\n",
     "\n",
-    "download(gtfs_url, wroclaw_gtfs.as_posix())"
+    "download_file(gtfs_url, wroclaw_gtfs)"
    ]
   },
   {
diff --git a/srai/downloaders/__init__.py b/srai/downloaders/__init__.py
new file mode 100644
index 00000000..c98d3477
--- /dev/null
+++ b/srai/downloaders/__init__.py
@@ -0,0 +1,5 @@
+"""Downloaders."""
+
+from .gtfs_downloader import GTFSDownloader
+
+__all__ = ["GTFSDownloader"]
diff --git a/srai/downloaders/gtfs_downloader.py b/srai/downloaders/gtfs_downloader.py
new file mode 100644
index 00000000..c5f3ac16
--- /dev/null
+++ b/srai/downloaders/gtfs_downloader.py
@@ -0,0 +1,51 @@
+"""
+GTFS Downloader.
+
+This module contains GTFS downlaoder. GTFS downloader is a proxy to The Mobility Database[1].
+
+References:
+    [1] https://database.mobilitydata.org/
+"""
+
+from pathlib import Path
+
+import pandas as pd
+
+from srai.utils import download_file
+
+CATALOG_URL = "https://bit.ly/catalogs-csv"
+CACHE_DIR = Path.home() / ".cache" / "srai"
+
+
+class GTFSDownloader:
+    """
+    GTFSDownloader.
+
+    This class provides methods to search and download GTFS feeds from The Mobility Database[1].
+    """
+
+    def __init__(self, update_catalog: bool = False) -> None:
+        """
+        Initialize GTFS downloader.
+
+        Args:
+            update_catalog (bool, optional): Update catalog file if present. Defaults to False.
+        """
+        self.catalog = self._load_catalog(update_catalog)
+
+    def _load_catalog(self, update_catalog: bool = False) -> pd.DataFrame:
+        """
+        Load catalog.
+
+        Args:
+            update_catalog (bool, optional): Update catalog file if present. Defaults to False.
+
+        Returns:
+            pd.DataFrame: Catalog.
+        """
+        catalog_file = CACHE_DIR / "catalog.csv"
+
+        if not catalog_file.exists() or update_catalog:
+            download_file(CATALOG_URL, catalog_file)
+
+        return pd.read_csv(catalog_file)
diff --git a/srai/utils/__init__.py b/srai/utils/__init__.py
index ccb8923e..bd92c7c2 100644
--- a/srai/utils/__init__.py
+++ b/srai/utils/__init__.py
@@ -1,8 +1,10 @@
 """Utilities."""
 
+from .download import download_file
 from .merge import _merge_disjointed_gdf_geometries, _merge_disjointed_polygons
 
 __all__ = [
     "_merge_disjointed_gdf_geometries",
     "_merge_disjointed_polygons",
+    "download_file",
 ]
diff --git a/examples/loaders/utils.py b/srai/utils/download.py
similarity index 69%
rename from examples/loaders/utils.py
rename to srai/utils/download.py
index 3585b1e7..c6f6f37b 100644
--- a/examples/loaders/utils.py
+++ b/srai/utils/download.py
@@ -1,23 +1,26 @@
 """Utility functions for loaders examples."""
+from pathlib import Path
+
 import requests
 from tqdm import tqdm
 
 
-def download(url: str, fname: str, chunk_size: int = 1024) -> None:
+def download_file(url: str, filename: Path, chunk_size: int = 1024) -> None:
     """
     Download a file with progress bar.
 
     Args:
         url (str): URL to download.
-        fname (str): File name.
+        filename (Path): File to save data to.
         chunk_size (str): Chunk size.
 
     Source: https://gist.github.com/yanqd0/c13ed29e29432e3cf3e7c38467f42f51
     """
     resp = requests.get(url, stream=True)
     total = int(resp.headers.get("content-length", 0))
-    with open(fname, "wb") as file, tqdm(
-        desc=fname.split("/")[-1],
+    filename.parent.mkdir(parents=True, exist_ok=True)
+    with open(filename, "wb") as file, tqdm(
+        desc=filename.name,
         total=total,
         unit="iB",
         unit_scale=True,

From 4cedc56b26ebe4ce9c5782a3d620e4f85f24f897 Mon Sep 17 00:00:00 2001
From: Piotr Gramacki <p.gramacki@gmail.com>
Date: Mon, 13 Mar 2023 09:49:28 +0100
Subject: [PATCH 02/16] fix(refurb): use pathlib .open() method

---
 srai/utils/download.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/srai/utils/download.py b/srai/utils/download.py
index c6f6f37b..ec7c9534 100644
--- a/srai/utils/download.py
+++ b/srai/utils/download.py
@@ -19,7 +19,7 @@ def download_file(url: str, filename: Path, chunk_size: int = 1024) -> None:
     resp = requests.get(url, stream=True)
     total = int(resp.headers.get("content-length", 0))
     filename.parent.mkdir(parents=True, exist_ok=True)
-    with open(filename, "wb") as file, tqdm(
+    with filename.open("wb") as file, tqdm(
         desc=filename.name,
         total=total,
         unit="iB",

From 9996c6fc4ce4a85c61e7c7e047c728b2f246c3a2 Mon Sep 17 00:00:00 2001
From: Piotr Gramacki <p.gramacki@gmail.com>
Date: Mon, 13 Mar 2023 20:51:19 +0100
Subject: [PATCH 03/16] chore: add basic search to catalog

---
 examples/downloaders/gtfs_downloader.ipynb |  9 ++++++++
 srai/downloaders/gtfs_downloader.py        | 27 ++++++++++++++++++++++
 2 files changed, 36 insertions(+)

diff --git a/examples/downloaders/gtfs_downloader.ipynb b/examples/downloaders/gtfs_downloader.ipynb
index 7f189361..77d9e65b 100644
--- a/examples/downloaders/gtfs_downloader.ipynb
+++ b/examples/downloaders/gtfs_downloader.ipynb
@@ -17,6 +17,15 @@
    "source": [
     "downloader = GTFSDownloader()"
    ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "downloader.search(\"Dolnoslaskie,PL\")"
+   ]
   }
  ],
  "metadata": {
diff --git a/srai/downloaders/gtfs_downloader.py b/srai/downloaders/gtfs_downloader.py
index c5f3ac16..a665d1b5 100644
--- a/srai/downloaders/gtfs_downloader.py
+++ b/srai/downloaders/gtfs_downloader.py
@@ -15,6 +15,13 @@
 
 CATALOG_URL = "https://bit.ly/catalogs-csv"
 CACHE_DIR = Path.home() / ".cache" / "srai"
+CATALOG_SEARCH_COLUMNS = [
+    "name",
+    "location.country_code",
+    "location.subdivision_name",
+    "location.municipality",
+    "provider",
+]
 
 
 class GTFSDownloader:
@@ -33,6 +40,26 @@ def __init__(self, update_catalog: bool = False) -> None:
         """
         self.catalog = self._load_catalog(update_catalog)
 
+    def update_catalog(self) -> None:
+        """Update catalog file."""
+        self.catalog = self._load_catalog(update_catalog=True)
+
+    def search(self, query: str) -> pd.DataFrame:
+        """
+        Search catalog.
+
+        Args:
+            query (str): Search query.
+
+        Returns:
+            pd.DataFrame: Search results.
+        """
+        return self.catalog[
+            self.catalog[CATALOG_SEARCH_COLUMNS]
+            .astype(str)
+            .apply(lambda x: x.str.contains("|".join(query.split(","))).any(), axis=1)
+        ]
+
     def _load_catalog(self, update_catalog: bool = False) -> pd.DataFrame:
         """
         Load catalog.

From c643f7564ed13ee5e069b3bb453d65bcb7e4828c Mon Sep 17 00:00:00 2001
From: Piotr <p.gramacki@gmail.com>
Date: Mon, 13 Mar 2023 22:12:19 +0100
Subject: [PATCH 04/16] chore: complete text search method

---
 examples/downloaders/gtfs_downloader.ipynb |  5 +--
 srai/downloaders/gtfs_downloader.py        | 36 +++++++++++++++++++---
 2 files changed, 34 insertions(+), 7 deletions(-)

diff --git a/examples/downloaders/gtfs_downloader.ipynb b/examples/downloaders/gtfs_downloader.ipynb
index 77d9e65b..ecc7091c 100644
--- a/examples/downloaders/gtfs_downloader.ipynb
+++ b/examples/downloaders/gtfs_downloader.ipynb
@@ -6,7 +6,8 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "from srai.downloaders import GTFSDownloader"
+    "from srai.downloaders import GTFSDownloader\n",
+    "import unicodedata"
    ]
   },
   {
@@ -24,7 +25,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "downloader.search(\"Dolnoslaskie,PL\")"
+    "downloader.search(\"Wrocław, PL\")"
    ]
   }
  ],
diff --git a/srai/downloaders/gtfs_downloader.py b/srai/downloaders/gtfs_downloader.py
index a665d1b5..b6804492 100644
--- a/srai/downloaders/gtfs_downloader.py
+++ b/srai/downloaders/gtfs_downloader.py
@@ -7,9 +7,11 @@
     [1] https://database.mobilitydata.org/
 """
 
+import unicodedata
 from pathlib import Path
 
 import pandas as pd
+from functional import seq
 
 from srai.utils import download_file
 
@@ -46,20 +48,44 @@ def update_catalog(self) -> None:
 
     def search(self, query: str) -> pd.DataFrame:
         """
-        Search catalog.
+        Search catalog using queries in form of "query1, query2, ...".
+
+        Examples: "Wrocław, PL", "New York, US", "Amtrak".
 
         Args:
-            query (str): Search query.
+            query (str): Search query with elements separated by comma.
 
         Returns:
             pd.DataFrame: Search results.
         """
+        query_processed = seq(query.split(",")).map(self._remove_accents).map(str.strip).to_list()
+        catalog_processed = (
+            self.catalog[CATALOG_SEARCH_COLUMNS].fillna("").applymap(self._remove_accents)
+        )
+
         return self.catalog[
-            self.catalog[CATALOG_SEARCH_COLUMNS]
-            .astype(str)
-            .apply(lambda x: x.str.contains("|".join(query.split(","))).any(), axis=1)
+            seq(catalog_processed).map(lambda row: all(q in row for q in query_processed)).to_list()
         ]
 
+    def _remove_accents(self, text: str) -> str:
+        """
+        Remove accents from text.
+
+        Will remove all accents ("ś" -> "s", "ü" -> "u") and replace "ł" with "l".
+
+        Args:
+            text (str): Text to process.
+
+        Returns:
+            str: Text without accents.
+        """
+        result = "".join(
+            c for c in unicodedata.normalize("NFD", text) if unicodedata.category(c) != "Mn"
+        )
+        result = result.replace("ł", "l")  # required for Polish
+
+        return result
+
     def _load_catalog(self, update_catalog: bool = False) -> pd.DataFrame:
         """
         Load catalog.

From b2dbfa972125e93afa4355e634104dba4bae87f3 Mon Sep 17 00:00:00 2001
From: Piotr <p.gramacki@gmail.com>
Date: Wed, 15 Mar 2023 00:19:59 +0100
Subject: [PATCH 05/16] chore: add geometry to downloaded catalog

---
 srai/downloaders/gtfs_downloader.py | 22 ++++++++++++++++++++--
 1 file changed, 20 insertions(+), 2 deletions(-)

diff --git a/srai/downloaders/gtfs_downloader.py b/srai/downloaders/gtfs_downloader.py
index b6804492..6008d39a 100644
--- a/srai/downloaders/gtfs_downloader.py
+++ b/srai/downloaders/gtfs_downloader.py
@@ -10,10 +10,13 @@
 import unicodedata
 from pathlib import Path
 
+import geopandas as gpd
 import pandas as pd
 from functional import seq
+from shapely.geometry import box
 
 from srai.utils import download_file
+from srai.utils.constants import WGS84_CRS
 
 CATALOG_URL = "https://bit.ly/catalogs-csv"
 CACHE_DIR = Path.home() / ".cache" / "srai"
@@ -24,6 +27,12 @@
     "location.municipality",
     "provider",
 ]
+CATALOG_BBOX_COLUMNS = [
+    "location.bounding_box.minimum_longitude",
+    "location.bounding_box.minimum_latitude",
+    "location.bounding_box.maximum_longitude",
+    "location.bounding_box.maximum_latitude",
+]
 
 
 class GTFSDownloader:
@@ -86,7 +95,7 @@ def _remove_accents(self, text: str) -> str:
 
         return result
 
-    def _load_catalog(self, update_catalog: bool = False) -> pd.DataFrame:
+    def _load_catalog(self, update_catalog: bool = False) -> gpd.GeoDataFrame:
         """
         Load catalog.
 
@@ -101,4 +110,13 @@ def _load_catalog(self, update_catalog: bool = False) -> pd.DataFrame:
         if not catalog_file.exists() or update_catalog:
             download_file(CATALOG_URL, catalog_file)
 
-        return pd.read_csv(catalog_file)
+        df = pd.read_csv(catalog_file)
+
+        df[CATALOG_BBOX_COLUMNS] = df[CATALOG_BBOX_COLUMNS].fillna(0)
+
+        df["geometry"] = df.apply(
+            lambda row: (box(*row[CATALOG_BBOX_COLUMNS].tolist())),
+            axis=1,
+        )
+
+        return gpd.GeoDataFrame(df, geometry="geometry", crs=WGS84_CRS)

From 6a87fe5afa794be961ccaff6cad82bb291f75bdd Mon Sep 17 00:00:00 2001
From: Piotr <p.gramacki@gmail.com>
Date: Wed, 15 Mar 2023 22:46:20 +0100
Subject: [PATCH 06/16] fix: update pdm.lock

---
 pdm.lock | 1228 ++++++++++++++++++++++++++++--------------------------
 1 file changed, 645 insertions(+), 583 deletions(-)

diff --git a/pdm.lock b/pdm.lock
index 54796be8..61bd3573 100644
--- a/pdm.lock
+++ b/pdm.lock
@@ -249,6 +249,11 @@ version = "2.2.1"
 requires_python = ">=3.6"
 summary = "Extended pickling support for Python objects"
 
+[[package]]
+name = "cmake"
+version = "3.26.0"
+summary = "CMake is an open-source, cross-platform family of tools designed to build, test and package software"
+
 [[package]]
 name = "colorama"
 version = "0.4.6"
@@ -339,15 +344,9 @@ name = "editorconfig"
 version = "0.12.3"
 summary = "EditorConfig File Locator and Interpreter for Python"
 
-[[package]]
-name = "entrypoints"
-version = "0.4"
-requires_python = ">=3.6"
-summary = "Discover and load entry points from installed packages."
-
 [[package]]
 name = "exceptiongroup"
-version = "1.1.0"
+version = "1.1.1"
 requires_python = ">=3.7"
 summary = "Backport of PEP 654 (exception groups)"
 
@@ -358,7 +357,7 @@ summary = "Get the currently executing AST node of a frame, and other informatio
 
 [[package]]
 name = "fastjsonschema"
-version = "2.16.2"
+version = "2.16.3"
 summary = "Fastest Python implementation of JSON schema"
 
 [[package]]
@@ -373,7 +372,7 @@ dependencies = [
 
 [[package]]
 name = "filelock"
-version = "3.9.0"
+version = "3.10.0"
 requires_python = ">=3.7"
 summary = "A platform independent file lock."
 
@@ -427,8 +426,8 @@ dependencies = [
 
 [[package]]
 name = "fonttools"
-version = "4.38.0"
-requires_python = ">=3.7"
+version = "4.39.0"
+requires_python = ">=3.8"
 summary = "Tools to manipulate font files"
 
 [[package]]
@@ -445,19 +444,19 @@ summary = "A list-like structure which implements collections.abc.MutableSequenc
 
 [[package]]
 name = "fsspec"
-version = "2023.1.0"
-requires_python = ">=3.7"
+version = "2023.3.0"
+requires_python = ">=3.8"
 summary = "File-system specification"
 
 [[package]]
 name = "fsspec"
-version = "2023.1.0"
+version = "2023.3.0"
 extras = ["http"]
-requires_python = ">=3.7"
+requires_python = ">=3.8"
 summary = "File-system specification"
 dependencies = [
     "aiohttp!=4.0.0a0,!=4.0.0a1",
-    "fsspec==2023.1.0",
+    "fsspec==2023.3.0",
     "requests",
 ]
 
@@ -531,13 +530,13 @@ summary = "Hierarchical hexagonal geospatial indexing system"
 
 [[package]]
 name = "haversine"
-version = "2.7.0"
+version = "2.8.0"
 requires_python = ">=3.5"
 summary = "Calculate the distance between 2 points on Earth."
 
 [[package]]
 name = "identify"
-version = "2.5.18"
+version = "2.5.20"
 requires_python = ">=3.7"
 summary = "File identification library for Python"
 
@@ -573,7 +572,7 @@ summary = "brain-dead simple config-ini parsing"
 
 [[package]]
 name = "ipykernel"
-version = "6.21.2"
+version = "6.21.3"
 requires_python = ">=3.8"
 summary = "IPython Kernel for Jupyter"
 dependencies = [
@@ -594,7 +593,7 @@ dependencies = [
 
 [[package]]
 name = "ipython"
-version = "8.10.0"
+version = "8.11.0"
 requires_python = ">=3.8"
 summary = "IPython: Productive Interactive Computing"
 dependencies = [
@@ -606,7 +605,7 @@ dependencies = [
     "matplotlib-inline",
     "pexpect>4.3; sys_platform != \"win32\"",
     "pickleshare",
-    "prompt-toolkit<3.1.0,>=3.0.30",
+    "prompt-toolkit!=3.0.37,<3.1.0,>=3.0.30",
     "pygments>=2.4.0",
     "stack-data",
     "traitlets>=5",
@@ -754,7 +753,7 @@ dependencies = [
 
 [[package]]
 name = "jupyter-server"
-version = "2.3.0"
+version = "2.4.0"
 requires_python = ">=3.8"
 summary = "The backend—i.e. core services, APIs, and REST endpoints—to Jupyter web applications."
 dependencies = [
@@ -802,7 +801,7 @@ summary = "A JupyterLab extension."
 
 [[package]]
 name = "jupytext"
-version = "1.14.4"
+version = "1.14.5"
 requires_python = "~=3.6"
 summary = "Jupyter notebooks as Markdown documents, Julia, Python or R scripts"
 dependencies = [
@@ -844,7 +843,7 @@ summary = "Variable width build numbers with lexical ordering."
 
 [[package]]
 name = "licensecheck"
-version = "2023.0.1"
+version = "2023.1.1"
 requires_python = ">=3.8,<4.0"
 summary = "Output the licenses used by dependencies and check if these are compatible with the project license"
 dependencies = [
@@ -858,7 +857,7 @@ dependencies = [
 
 [[package]]
 name = "lightning-utilities"
-version = "0.7.0"
+version = "0.8.0"
 requires_python = ">=3.7"
 summary = "PyTorch Lightning Sample project."
 dependencies = [
@@ -867,10 +866,9 @@ dependencies = [
 ]
 
 [[package]]
-name = "lxml"
-version = "4.9.2"
-requires_python = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, != 3.4.*"
-summary = "Powerful and Pythonic XML processing library combining libxml2/libxslt with the ElementTree API."
+name = "lit"
+version = "15.0.7"
+summary = "A Software Testing Tool"
 
 [[package]]
 name = "markdown"
@@ -883,7 +881,7 @@ dependencies = [
 
 [[package]]
 name = "markdown-it-py"
-version = "2.1.0"
+version = "2.2.0"
 requires_python = ">=3.7"
 summary = "Python port of markdown-it. Markdown parsing, done right!"
 dependencies = [
@@ -898,7 +896,7 @@ summary = "Safely add untrusted strings to HTML/XML markup."
 
 [[package]]
 name = "matplotlib"
-version = "3.7.0"
+version = "3.7.1"
 requires_python = ">=3.8"
 summary = "Python plotting package"
 dependencies = [
@@ -931,7 +929,7 @@ summary = "McCabe checker, plugin for flake8"
 
 [[package]]
 name = "mdit-py-plugins"
-version = "0.3.4"
+version = "0.3.5"
 requires_python = ">=3.7"
 summary = "Collection of plugins for markdown-it-py"
 dependencies = [
@@ -963,8 +961,8 @@ dependencies = [
 
 [[package]]
 name = "mistune"
-version = "0.8.4"
-summary = "The fastest markdown parser in pure Python"
+version = "2.0.5"
+summary = "A sane Markdown parser with useful plugins and renderers"
 
 [[package]]
 name = "mkdocs"
@@ -1017,29 +1015,31 @@ dependencies = [
 
 [[package]]
 name = "mkdocs-jupyter"
-version = "0.22.0"
-requires_python = ">=3.7.1,<4"
+version = "0.23.0"
+requires_python = ">=3.7"
 summary = "Use Jupyter in mkdocs websites"
 dependencies = [
-    "Pygments<3.0.0,>=2.12.0",
-    "jupytext<2.0.0,>=1.13.8",
-    "mkdocs-material<9.0.0,>=8.0.0",
-    "mkdocs<2.0.0,>=1.2.3",
-    "nbconvert<7.0.0,>=6.2.0",
+    "jupytext<2,>1.13.8",
+    "mkdocs-material>9.0.0",
+    "mkdocs<2,>=1.4.2",
+    "nbconvert<8,>=7.2.9",
+    "pygments>2.12.0",
 ]
 
 [[package]]
 name = "mkdocs-material"
-version = "8.5.11"
+version = "9.1.3"
 requires_python = ">=3.7"
 summary = "Documentation that simply works"
 dependencies = [
-    "jinja2>=3.0.2",
+    "colorama>=0.4",
+    "jinja2>=3.0",
     "markdown>=3.2",
     "mkdocs-material-extensions>=1.1",
-    "mkdocs>=1.4.0",
-    "pygments>=2.12",
-    "pymdown-extensions>=9.4",
+    "mkdocs>=1.4.2",
+    "pygments>=2.14",
+    "pymdown-extensions>=9.9.1",
+    "regex>=2022.4.24",
     "requests>=2.26",
 ]
 
@@ -1100,6 +1100,11 @@ dependencies = [
     "mkdocstrings==0.20.0",
 ]
 
+[[package]]
+name = "mpmath"
+version = "1.3.0"
+summary = "Python library for arbitrary-precision floating-point arithmetic"
+
 [[package]]
 name = "multidict"
 version = "6.0.4"
@@ -1133,13 +1138,13 @@ summary = "Type system extensions for programs checked with the mypy type checke
 
 [[package]]
 name = "natsort"
-version = "8.2.0"
-requires_python = ">=3.6"
+version = "8.3.1"
+requires_python = ">=3.7"
 summary = "Simple yet flexible natural sorting in Python."
 
 [[package]]
 name = "nbclassic"
-version = "0.5.2"
+version = "0.5.3"
 requires_python = ">=3.7"
 summary = "Jupyter Notebook as a Jupyter Server extension."
 dependencies = [
@@ -1176,20 +1181,19 @@ dependencies = [
 
 [[package]]
 name = "nbconvert"
-version = "6.5.4"
+version = "7.2.10"
 requires_python = ">=3.7"
 summary = "Converting Jupyter Notebooks"
 dependencies = [
-    "MarkupSafe>=2.0",
     "beautifulsoup4",
     "bleach",
     "defusedxml",
-    "entrypoints>=0.2.2",
+    "importlib-metadata>=3.6; python_version < \"3.10\"",
     "jinja2>=3.0",
     "jupyter-core>=4.7",
     "jupyterlab-pygments",
-    "lxml",
-    "mistune<2,>=0.8.1",
+    "markupsafe>=2.0",
+    "mistune<3,>=2.0.3",
     "nbclient>=0.5.0",
     "nbformat>=5.1",
     "packaging",
@@ -1234,7 +1238,7 @@ dependencies = [
 
 [[package]]
 name = "notebook"
-version = "6.5.2"
+version = "6.5.3"
 requires_python = ">=3.7"
 summary = "A web-based notebook environment for interactive computing"
 dependencies = [
@@ -1281,6 +1285,16 @@ dependencies = [
     "wheel",
 ]
 
+[[package]]
+name = "nvidia-cuda-cupti-cu11"
+version = "11.7.101"
+requires_python = ">=3"
+summary = "CUDA profiling tools runtime libs."
+dependencies = [
+    "setuptools",
+    "wheel",
+]
+
 [[package]]
 name = "nvidia-cuda-nvrtc-cu11"
 version = "11.7.99"
@@ -1306,6 +1320,57 @@ dependencies = [
     "nvidia-cublas-cu11",
 ]
 
+[[package]]
+name = "nvidia-cufft-cu11"
+version = "10.9.0.58"
+requires_python = ">=3"
+summary = "CUFFT native runtime libraries"
+
+[[package]]
+name = "nvidia-curand-cu11"
+version = "10.2.10.91"
+requires_python = ">=3"
+summary = "CURAND native runtime libraries"
+dependencies = [
+    "setuptools",
+    "wheel",
+]
+
+[[package]]
+name = "nvidia-cusolver-cu11"
+version = "11.4.0.1"
+requires_python = ">=3"
+summary = "CUDA solver native runtime libraries"
+dependencies = [
+    "nvidia-cublas-cu11",
+]
+
+[[package]]
+name = "nvidia-cusparse-cu11"
+version = "11.7.4.91"
+requires_python = ">=3"
+summary = "CUSPARSE native runtime libraries"
+dependencies = [
+    "setuptools",
+    "wheel",
+]
+
+[[package]]
+name = "nvidia-nccl-cu11"
+version = "2.14.3"
+requires_python = ">=3"
+summary = "NVIDIA Collective Communication Library (NCCL) Runtime"
+
+[[package]]
+name = "nvidia-nvtx-cu11"
+version = "11.7.91"
+requires_python = ">=3"
+summary = "NVIDIA Tools Extension"
+dependencies = [
+    "setuptools",
+    "wheel",
+]
+
 [[package]]
 name = "osmium"
 version = "3.6.0"
@@ -1332,21 +1397,6 @@ dependencies = [
     "requests>=2.28",
 ]
 
-[[package]]
-name = "osmpythontools"
-version = "0.3.5"
-summary = "A library to access OpenStreetMap related services"
-dependencies = [
-    "beautifulsoup4",
-    "geojson",
-    "lxml",
-    "matplotlib",
-    "numpy",
-    "pandas",
-    "ujson",
-    "xarray",
-]
-
 [[package]]
 name = "overpass"
 version = "0.7"
@@ -1398,7 +1448,7 @@ dependencies = [
 
 [[package]]
 name = "pathspec"
-version = "0.11.0"
+version = "0.11.1"
 requires_python = ">=3.7"
 summary = "Utility library for gitignore style pattern matching of file paths."
 
@@ -1429,13 +1479,13 @@ summary = "Resolve a name to an object."
 
 [[package]]
 name = "platformdirs"
-version = "3.0.0"
+version = "3.1.1"
 requires_python = ">=3.7"
 summary = "A small Python package for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
 
 [[package]]
 name = "plotly"
-version = "5.13.0"
+version = "5.13.1"
 requires_python = ">=3.6"
 summary = "An open-source, interactive data visualization library for Python"
 dependencies = [
@@ -1469,7 +1519,7 @@ summary = "Python client for the Prometheus monitoring system."
 
 [[package]]
 name = "prompt-toolkit"
-version = "3.0.37"
+version = "3.0.38"
 requires_python = ">=3.7.0"
 summary = "Library for building powerful interactive command lines in Python"
 dependencies = [
@@ -1575,17 +1625,18 @@ summary = "Pygments is a syntax highlighting package written in Python."
 
 [[package]]
 name = "pymap3d"
-version = "2.9.1"
-requires_python = ">=3.7"
+version = "3.0.1"
+requires_python = ">=3.8"
 summary = "pure Python (no prereqs) coordinate conversions, following convention of several popular Matlab routines."
 
 [[package]]
 name = "pymdown-extensions"
-version = "9.9.2"
+version = "9.10"
 requires_python = ">=3.7"
 summary = "Extension pack for Python Markdown."
 dependencies = [
     "markdown>=3.2",
+    "pyyaml",
 ]
 
 [[package]]
@@ -1611,11 +1662,11 @@ dependencies = [
 
 [[package]]
 name = "pyproject-api"
-version = "1.5.0"
+version = "1.5.1"
 requires_python = ">=3.7"
 summary = "API to interact with the python pyproject.toml based projects"
 dependencies = [
-    "packaging>=21.3",
+    "packaging>=23",
     "tomli>=2.0.1; python_version < \"3.11\"",
 ]
 
@@ -1627,7 +1678,7 @@ summary = "Persistent/Functional/Immutable data structures"
 
 [[package]]
 name = "pytest"
-version = "7.2.1"
+version = "7.2.2"
 requires_python = ">=3.7"
 summary = "pytest: simple powerful testing with Python"
 dependencies = [
@@ -1666,16 +1717,16 @@ summary = "A python library adding a json log formatter"
 
 [[package]]
 name = "pytorch-lightning"
-version = "1.9.3"
-requires_python = ">=3.7"
+version = "2.0.0"
+requires_python = ">=3.8"
 summary = "PyTorch Lightning is the lightweight PyTorch wrapper for ML researchers. Scale your models. Write less boilerplate."
 dependencies = [
     "PyYAML>=5.4",
     "fsspec[http]>2021.06.0",
-    "lightning-utilities>=0.6.0.post0",
+    "lightning-utilities>=0.7.0",
     "numpy>=1.17.2",
     "packaging>=17.1",
-    "torch>=1.10.0",
+    "torch>=1.11.0",
     "torchmetrics>=0.7.0",
     "tqdm>=4.57.0",
     "typing-extensions>=4.0.0",
@@ -1714,13 +1765,19 @@ dependencies = [
 
 [[package]]
 name = "pyzmq"
-version = "25.0.0"
+version = "25.0.1"
 requires_python = ">=3.6"
 summary = "Python bindings for 0MQ"
 dependencies = [
     "cffi; implementation_name == \"pypy\"",
 ]
 
+[[package]]
+name = "regex"
+version = "2022.10.31"
+requires_python = ">=3.6"
+summary = "Alternative regular expression module, to replace re."
+
 [[package]]
 name = "requests"
 version = "2.28.2"
@@ -1830,7 +1887,7 @@ summary = "Send file to trash natively under Mac OS X, Windows and Linux."
 
 [[package]]
 name = "setuptools"
-version = "67.4.0"
+version = "67.6.0"
 requires_python = ">=3.7"
 summary = "Easily download, build, install, upgrade, and uninstall Python packages"
 
@@ -1882,6 +1939,15 @@ dependencies = [
     "pure-eval",
 ]
 
+[[package]]
+name = "sympy"
+version = "1.11.1"
+requires_python = ">=3.8"
+summary = "Computer algebra system (CAS) in Python"
+dependencies = [
+    "mpmath>=0.19",
+]
+
 [[package]]
 name = "tabulate"
 version = "0.9.0"
@@ -1890,7 +1956,7 @@ summary = "Pretty-print tabular data"
 
 [[package]]
 name = "tenacity"
-version = "8.2.1"
+version = "8.2.2"
 requires_python = ">=3.6"
 summary = "Retry code until it succeeds"
 
@@ -1943,20 +2009,32 @@ dependencies = [
 
 [[package]]
 name = "torch"
-version = "1.13.1"
-requires_python = ">=3.7.0"
+version = "2.0.0"
+requires_python = ">=3.8.0"
 summary = "Tensors and Dynamic neural networks in Python with strong GPU acceleration"
 dependencies = [
-    "nvidia-cublas-cu11==11.10.3.66; platform_system == \"Linux\"",
-    "nvidia-cuda-nvrtc-cu11==11.7.99; platform_system == \"Linux\"",
-    "nvidia-cuda-runtime-cu11==11.7.99; platform_system == \"Linux\"",
-    "nvidia-cudnn-cu11==8.5.0.96; platform_system == \"Linux\"",
+    "filelock",
+    "jinja2",
+    "networkx",
+    "nvidia-cublas-cu11==11.10.3.66; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-cuda-cupti-cu11==11.7.101; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-cuda-nvrtc-cu11==11.7.99; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-cuda-runtime-cu11==11.7.99; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-cudnn-cu11==8.5.0.96; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-cufft-cu11==10.9.0.58; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-curand-cu11==10.2.10.91; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-cusolver-cu11==11.4.0.1; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-cusparse-cu11==11.7.4.91; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-nccl-cu11==2.14.3; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-nvtx-cu11==11.7.91; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "sympy",
+    "triton==2.0.0; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
     "typing-extensions",
 ]
 
 [[package]]
 name = "torchmetrics"
-version = "0.11.1"
+version = "0.11.4"
 requires_python = ">=3.7"
 summary = "PyTorch native Metrics"
 dependencies = [
@@ -1974,7 +2052,7 @@ summary = "Tornado is a Python web framework and asynchronous networking library
 
 [[package]]
 name = "tox"
-version = "4.4.6"
+version = "4.4.7"
 requires_python = ">=3.7"
 summary = "tox is a generic virtualenv management and test command line tool"
 dependencies = [
@@ -2002,8 +2080,8 @@ dependencies = [
 
 [[package]]
 name = "tqdm"
-version = "4.64.1"
-requires_python = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,>=2.7"
+version = "4.65.0"
+requires_python = ">=3.7"
 summary = "Fast, Extensible Progress Meter"
 dependencies = [
     "colorama; platform_system == \"Windows\"",
@@ -2024,17 +2102,20 @@ dependencies = [
 ]
 
 [[package]]
-name = "types-docutils"
-version = "0.19.1.5"
-summary = "Typing stubs for docutils"
+name = "triton"
+version = "2.0.0"
+summary = "A language and compiler for custom Deep Learning operations"
+dependencies = [
+    "cmake",
+    "filelock",
+    "lit",
+    "torch",
+]
 
 [[package]]
 name = "types-setuptools"
-version = "67.3.0.2"
+version = "67.6.0.0"
 summary = "Typing stubs for setuptools"
-dependencies = [
-    "types-docutils",
-]
 
 [[package]]
 name = "typing-extensions"
@@ -2042,12 +2123,6 @@ version = "4.5.0"
 requires_python = ">=3.7"
 summary = "Backported and Experimental Type Hints for Python 3.7+"
 
-[[package]]
-name = "ujson"
-version = "5.7.0"
-requires_python = ">=3.7"
-summary = "Ultra fast JSON encoder and decoder for Python"
-
 [[package]]
 name = "untokenize"
 version = "0.1.1"
@@ -2061,7 +2136,7 @@ summary = "RFC 6570 URI Template Processor"
 
 [[package]]
 name = "urllib3"
-version = "1.26.14"
+version = "1.26.15"
 requires_python = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*"
 summary = "HTTP library with thread-safe connection pooling, file post, and more."
 
@@ -2077,7 +2152,7 @@ summary = "Flexible version handling"
 
 [[package]]
 name = "virtualenv"
-version = "20.19.0"
+version = "20.21.0"
 requires_python = ">=3.7"
 summary = "Virtual Python Environment builder"
 dependencies = [
@@ -2088,7 +2163,7 @@ dependencies = [
 
 [[package]]
 name = "watchdog"
-version = "2.2.1"
+version = "2.3.1"
 requires_python = ">=3.6"
 summary = "Filesystem events monitoring"
 
@@ -2125,7 +2200,7 @@ summary = "WebSocket client for Python with low level API options"
 
 [[package]]
 name = "wheel"
-version = "0.38.4"
+version = "0.40.0"
 requires_python = ">=3.7"
 summary = "A built-package format for Python"
 
@@ -2137,17 +2212,6 @@ dependencies = [
     "notebook>=4.4.1",
 ]
 
-[[package]]
-name = "xarray"
-version = "2023.1.0"
-requires_python = ">=3.8"
-summary = "N-D labeled arrays and datasets in Python"
-dependencies = [
-    "numpy>=1.20",
-    "packaging>=21.3",
-    "pandas>=1.3",
-]
-
 [[package]]
 name = "yarl"
 version = "1.8.2"
@@ -2160,7 +2224,7 @@ dependencies = [
 
 [[package]]
 name = "zipp"
-version = "3.14.0"
+version = "3.15.0"
 requires_python = ">=3.7"
 summary = "Backport of pathlib-compatible object wrapper for zip files"
 
@@ -2499,6 +2563,25 @@ content_hash = "sha256:f473040349f39a3e06c17f1bca129841c8247e35f547c6c2ec706cc28
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 ]
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From 9511ce54e8857dc417b3d07657d506962beb685b Mon Sep 17 00:00:00 2001
From: Piotr <p.gramacki@gmail.com>
Date: Thu, 16 Mar 2023 01:54:28 +0100
Subject: [PATCH 07/16] fix: add nvidia libs to licensecheck ignore

---
 pyproject.toml | 7 +++++++
 1 file changed, 7 insertions(+)

diff --git a/pyproject.toml b/pyproject.toml
index 254b480a..70fa9be2 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -168,4 +168,11 @@ ignore_packages = [
     'nvidia-cudnn-cu11',        # uses NVIDIA license
     'nvidia-cublas-cu11',       # uses NVIDIA license
     'nvidia-cuda-nvrtc-cu11',   # uses NVIDIA license
+    'nvidia-cuda-cupti-cu11',   # uses NVIDIA license
+    'nvidia-cufft-cu11',        # uses NVIDIA license
+    'nvidia-curand-cu11',       # uses NVIDIA license
+    'nvidia-cusolver-cu11',     # uses NVIDIA license
+    'nvidia-cusparse-cu11',     # uses NVIDIA license
+    'nvidia-nccl-cu11',         # uses NVIDIA license
+    'nvidia-nvtx-cu11',         # uses NVIDIA license
 ]

From 2d70d5bff9ab8123d6532111a51ee115acdf55dd Mon Sep 17 00:00:00 2001
From: Piotr <p.gramacki@gmail.com>
Date: Thu, 16 Mar 2023 20:55:45 +0100
Subject: [PATCH 08/16] chore: add search by area

---
 examples/downloaders/gtfs_downloader.ipynb | 45 ++++++++++++++-
 srai/downloaders/gtfs_downloader.py        | 66 ++++++++++++++++++++--
 2 files changed, 103 insertions(+), 8 deletions(-)

diff --git a/examples/downloaders/gtfs_downloader.ipynb b/examples/downloaders/gtfs_downloader.ipynb
index ecc7091c..9f4933b6 100644
--- a/examples/downloaders/gtfs_downloader.ipynb
+++ b/examples/downloaders/gtfs_downloader.ipynb
@@ -25,7 +25,48 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "downloader.search(\"Wrocław, PL\")"
+    "downloader.search(query=\"Wrocław, PL\")"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "import osmnx as ox"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "wro_gdf = ox.geocode_to_gdf(\"Wrocław, PL\")"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "ax = (\n",
+    "    downloader.catalog[downloader.catalog.intersects(wro_gdf[\"geometry\"].iloc[0])]\n",
+    "    .iloc[[5]]\n",
+    "    .plot(alpha=0.5)\n",
+    ")\n",
+    "wro_gdf.plot(ax=ax, color=\"red\")"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "downloader.search(area=wro_gdf)"
    ]
   }
  ],
@@ -45,7 +86,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.8.14"
+   "version": "3.11.2"
   }
  },
  "nbformat": 4,
diff --git a/srai/downloaders/gtfs_downloader.py b/srai/downloaders/gtfs_downloader.py
index 6008d39a..ab75dd8c 100644
--- a/srai/downloaders/gtfs_downloader.py
+++ b/srai/downloaders/gtfs_downloader.py
@@ -9,6 +9,7 @@
 
 import unicodedata
 from pathlib import Path
+from typing import List, Optional
 
 import geopandas as gpd
 import pandas as pd
@@ -55,26 +56,79 @@ def update_catalog(self) -> None:
         """Update catalog file."""
         self.catalog = self._load_catalog(update_catalog=True)
 
-    def search(self, query: str) -> pd.DataFrame:
+    def search(
+        self, query: Optional[str] = None, area: Optional[gpd.GeoDataFrame] = None
+    ) -> pd.DataFrame:
         """
-        Search catalog using queries in form of "query1, query2, ...".
+        Search catalog by name, location or area.
 
-        Examples: "Wrocław, PL", "New York, US", "Amtrak".
+        Examples for text queries: "Wrocław, PL", "New York, US", "Amtrak".
 
         Args:
             query (str): Search query with elements separated by comma.
+            area (gpd.GeoDataFrame): Area to search in.
 
         Returns:
             pd.DataFrame: Search results.
+
+        Raises:
+            ValueError: If `area` is not a GeoDataFrame (has no geometry column).
+            ValueError: If neither `query` nor `area` is provided.
+        """
+        if query is None and area is None:
+            raise ValueError("Either query or area must be provided.")
+
+        if query is not None:
+            query_filter = self._search_by_query(query)
+        else:
+            query_filter = [True] * len(self.catalog)
+
+        if area is not None:
+            if "geometry" not in area.columns:
+                raise ValueError("Provided area has no geometry column.")
+
+            area_filter = self._search_by_area(area)
+        else:
+            area_filter = [True] * len(self.catalog)
+
+        return self.catalog[query_filter & area_filter]
+
+    def _search_by_query(self, query: str) -> pd.Series:
+        """
+        Perform search by query.
+
+        Args:
+            query (str): Search query with elements separated by comma.
+
+        Returns:
+            pd.Series: Series of booleans indicating if row matches the query.
         """
         query_processed = seq(query.split(",")).map(self._remove_accents).map(str.strip).to_list()
         catalog_processed = (
             self.catalog[CATALOG_SEARCH_COLUMNS].fillna("").applymap(self._remove_accents)
         )
 
-        return self.catalog[
+        res: List[bool] = (
             seq(catalog_processed).map(lambda row: all(q in row for q in query_processed)).to_list()
-        ]
+        )
+        return pd.Series(res, dtype=bool)
+
+    def _search_by_area(self, area: gpd.GeoDataFrame) -> pd.Series:
+        """
+        Perform search by area.
+
+        Args:
+            area (gpd.GeoDataFrame): Area to search in.
+
+        Returns:
+            pd.Series: Series of booleans indicating if row matches the area.
+        """
+        area = area.to_crs(WGS84_CRS)
+
+        result = pd.Series([False] * len(self.catalog), dtype=bool)
+        for _, row in area.iterrows():
+            result = result | self.catalog.intersects(row["geometry"])
+        return result
 
     def _remove_accents(self, text: str) -> str:
         """
@@ -97,7 +151,7 @@ def _remove_accents(self, text: str) -> str:
 
     def _load_catalog(self, update_catalog: bool = False) -> gpd.GeoDataFrame:
         """
-        Load catalog.
+        Load catalog and add geometry column.
 
         Args:
             update_catalog (bool, optional): Update catalog file if present. Defaults to False.

From a7ff8e090a7278a1a495fee239bb0469a4822e95 Mon Sep 17 00:00:00 2001
From: Piotr <p.gramacki@gmail.com>
Date: Thu, 16 Mar 2023 21:14:43 +0100
Subject: [PATCH 09/16] fix(refurb): disable check of FURB124

---
 pyproject.toml | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/pyproject.toml b/pyproject.toml
index 70fa9be2..534e50cf 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -176,3 +176,6 @@ ignore_packages = [
     'nvidia-nccl-cu11',         # uses NVIDIA license
     'nvidia-nvtx-cu11',         # uses NVIDIA license
 ]
+
+[tool.refurb]
+disable = ["FURB124"]

From 3876105b90bd837d0a0f209f7751195d117ce693 Mon Sep 17 00:00:00 2001
From: Piotr <p.gramacki@gmail.com>
Date: Thu, 16 Mar 2023 21:24:45 +0100
Subject: [PATCH 10/16] fix: remove loop from area search

---
 examples/downloaders/gtfs_downloader.ipynb | 3 +--
 srai/downloaders/gtfs_downloader.py        | 5 +----
 2 files changed, 2 insertions(+), 6 deletions(-)

diff --git a/examples/downloaders/gtfs_downloader.ipynb b/examples/downloaders/gtfs_downloader.ipynb
index 9f4933b6..23f89ec0 100644
--- a/examples/downloaders/gtfs_downloader.ipynb
+++ b/examples/downloaders/gtfs_downloader.ipynb
@@ -6,8 +6,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "from srai.downloaders import GTFSDownloader\n",
-    "import unicodedata"
+    "from srai.downloaders import GTFSDownloader"
    ]
   },
   {
diff --git a/srai/downloaders/gtfs_downloader.py b/srai/downloaders/gtfs_downloader.py
index ab75dd8c..c0b51497 100644
--- a/srai/downloaders/gtfs_downloader.py
+++ b/srai/downloaders/gtfs_downloader.py
@@ -124,10 +124,7 @@ def _search_by_area(self, area: gpd.GeoDataFrame) -> pd.Series:
             pd.Series: Series of booleans indicating if row matches the area.
         """
         area = area.to_crs(WGS84_CRS)
-
-        result = pd.Series([False] * len(self.catalog), dtype=bool)
-        for _, row in area.iterrows():
-            result = result | self.catalog.intersects(row["geometry"])
+        result = self.catalog.intersects(area.geometry.unary_union)
         return result
 
     def _remove_accents(self, text: str) -> str:

From f26a41b6c931710a2aaf887daab2e2eb17085c04 Mon Sep 17 00:00:00 2001
From: Piotr Gramacki <p.gramacki@gmail.com>
Date: Thu, 30 Mar 2023 10:55:41 +0200
Subject: [PATCH 11/16] fix: wrong param in download_file usage

---
 srai/loaders/osm_loaders/pbf_file_downloader.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/srai/loaders/osm_loaders/pbf_file_downloader.py b/srai/loaders/osm_loaders/pbf_file_downloader.py
index 7a259185..f1663de0 100644
--- a/srai/loaders/osm_loaders/pbf_file_downloader.py
+++ b/srai/loaders/osm_loaders/pbf_file_downloader.py
@@ -198,7 +198,7 @@ def download_pbf_file_for_polygon(self, polygon: Polygon) -> Path:
 
             download_file(
                 url=self.PROTOMAPS_API_DOWNLOAD_URL.format(extraction_uuid),
-                fname=pbf_file_path.as_posix(),
+                filename=pbf_file_path,
             )
 
         return pbf_file_path

From 1702b19229810e989ee1a599f619da2f8976ac17 Mon Sep 17 00:00:00 2001
From: Piotr <p.gramacki@gmail.com>
Date: Sun, 2 Apr 2023 19:41:17 +0200
Subject: [PATCH 12/16] fix: update gitignore to ignore some pdm stuff

---
 .gitignore | 302 ++++++++++++++++++++++++++---------------------------
 1 file changed, 151 insertions(+), 151 deletions(-)

diff --git a/.gitignore b/.gitignore
index 2efe9e7d..9e1f4281 100644
--- a/.gitignore
+++ b/.gitignore
@@ -1,151 +1,151 @@
-# Byte-compiled / optimized / DLL files
-__pycache__/
-*.py[cod]
-*$py.class
-
-# C extensions
-*.so
-
-# Distribution / packaging
-.Python
-build/
-develop-eggs/
-dist/
-downloads/
-eggs/
-.eggs/
-lib/
-lib64/
-parts/
-sdist/
-var/
-wheels/
-pip-wheel-metadata/
-share/python-wheels/
-*.egg-info/
-.installed.cfg
-*.egg
-MANIFEST
-
-# PyInstaller
-#  Usually these files are written by a python script from a template
-#  before PyInstaller builds the exe, so as to inject date/other infos into it.
-*.manifest
-*.spec
-
-# Installer logs
-pip-log.txt
-pip-delete-this-directory.txt
-
-# Unit test / coverage reports
-htmlcov/
-.tox/
-.nox/
-.coverage
-.coverage.*
-.cache
-nosetests.xml
-coverage.xml
-coverage.*.xml
-*.cover
-*.py,cover
-.hypothesis/
-.pytest_cache/
-
-# Translations
-*.mo
-*.pot
-
-# Django stuff:
-*.log
-local_settings.py
-db.sqlite3
-db.sqlite3-journal
-
-# Flask stuff:
-instance/
-.webassets-cache
-
-# Scrapy stuff:
-.scrapy
-
-# Sphinx documentation
-docs/_build/
-
-# PyBuilder
-target/
-
-# Jupyter Notebook
-.ipynb_checkpoints
-
-# IPython
-profile_default/
-ipython_config.py
-
-# pyenv
-# .python-version
-
-# pipenv
-#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
-#   However, in case of collaboration, if having platform-specific dependencies or dependencies
-#   having no cross-platform support, pipenv may install dependencies that don't work, or not
-#   install all needed dependencies.
-#Pipfile.lock
-
-# PEP 582; used by e.g. github.com/David-OConnor/pyflow
-__pypackages__/
-
-# Celery stuff
-celerybeat-schedule
-celerybeat.pid
-
-# SageMath parsed files
-*.sage.py
-
-# Environments
-.env
-.venv
-env/
-venv/
-ENV/
-env.bak/
-venv.bak/
-
-# Spyder project settings
-.spyderproject
-.spyproject
-
-# Rope project settings
-.ropeproject
-
-# mkdocs documentation
-/site
-
-# mypy
-.mypy_cache/
-.dmypy.json
-dmypy.json
-
-# Pyre type checker
-.pyre/
-
-# pdm
-.pdm.toml
-requirements.txt
-
-# VSCode
-.vscode/**/*
-!.vscode/settings.json.default
-!.vscode/extensions.json
-
-# osmnx
-cache/
-
-# pytorch lightning
-lightning_logs/
-
-# files_cache
-files/
-
-# ruff
-.ruff_cache
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+pip-wheel-metadata/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+coverage.*.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+# .python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pdm
+.pdm-python
+requirements.txt
+
+# VSCode
+.vscode/**/*
+!.vscode/settings.json.default
+!.vscode/extensions.json
+
+# osmnx
+cache/
+
+# pytorch lightning
+lightning_logs/
+
+# files_cache
+files/
+
+# ruff
+.ruff_cache

From e61c230a7478994c12fadb1dc176ef4bd76cad19 Mon Sep 17 00:00:00 2001
From: Piotr <p.gramacki@gmail.com>
Date: Wed, 26 Jul 2023 22:03:31 +0200
Subject: [PATCH 13/16] fix: update lockfile

---
 pdm.lock | 4847 ++++++++++++++++++++++++++++++++----------------------
 1 file changed, 2854 insertions(+), 1993 deletions(-)

diff --git a/pdm.lock b/pdm.lock
index 7ec1d341..748c28cc 100644
--- a/pdm.lock
+++ b/pdm.lock
@@ -1,6 +1,104 @@
 # This file is @generated by PDM.
 # It is not intended for manual editing.
 
+[metadata]
+groups = ["default", "all", "dev", "docs", "gtfs", "license", "lint", "osm", "performance", "plotting", "test", "torch", "visualization", "voronoi"]
+cross_platform = true
+static_urls = false
+lock_version = "4.3"
+content_hash = "sha256:7e1775e6bf5d3006ef4508acb7ac6a477c779534aeb44df586d3ac481b32cd5f"
+
+[[package]]
+name = "aiohttp"
+version = "3.8.5"
+requires_python = ">=3.6"
+summary = "Async http client/server framework (asyncio)"
+dependencies = [
+    "aiosignal>=1.1.2",
+    "async-timeout<5.0,>=4.0.0a3",
+    "attrs>=17.3.0",
+    "charset-normalizer<4.0,>=2.0",
+    "frozenlist>=1.1.1",
+    "multidict<7.0,>=4.5",
+    "yarl<2.0,>=1.0",
+]
+files = [
+    {file = "aiohttp-3.8.5-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:a94159871304770da4dd371f4291b20cac04e8c94f11bdea1c3478e557fbe0d8"},
+    {file = "aiohttp-3.8.5-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:13bf85afc99ce6f9ee3567b04501f18f9f8dbbb2ea11ed1a2e079670403a7c84"},
+    {file = "aiohttp-3.8.5-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:2ce2ac5708501afc4847221a521f7e4b245abf5178cf5ddae9d5b3856ddb2f3a"},
+    {file = "aiohttp-3.8.5-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:96943e5dcc37a6529d18766597c491798b7eb7a61d48878611298afc1fca946c"},
+    {file = "aiohttp-3.8.5-cp310-cp310-manylinux_2_17_ppc64le.manylinux2014_ppc64le.whl", hash = "sha256:2ad5c3c4590bb3cc28b4382f031f3783f25ec223557124c68754a2231d989e2b"},
+    {file = "aiohttp-3.8.5-cp310-cp310-manylinux_2_17_s390x.manylinux2014_s390x.whl", hash = "sha256:0c413c633d0512df4dc7fd2373ec06cc6a815b7b6d6c2f208ada7e9e93a5061d"},
+    {file = "aiohttp-3.8.5-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:df72ac063b97837a80d80dec8d54c241af059cc9bb42c4de68bd5b61ceb37caa"},
+    {file = "aiohttp-3.8.5-cp310-cp310-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl", hash = "sha256:c48c5c0271149cfe467c0ff8eb941279fd6e3f65c9a388c984e0e6cf57538e14"},
+    {file = "aiohttp-3.8.5-cp310-cp310-musllinux_1_1_aarch64.whl", hash = "sha256:368a42363c4d70ab52c2c6420a57f190ed3dfaca6a1b19afda8165ee16416a82"},
+    {file = "aiohttp-3.8.5-cp310-cp310-musllinux_1_1_i686.whl", hash = "sha256:7607ec3ce4993464368505888af5beb446845a014bc676d349efec0e05085905"},
+    {file = "aiohttp-3.8.5-cp310-cp310-musllinux_1_1_ppc64le.whl", hash = "sha256:0d21c684808288a98914e5aaf2a7c6a3179d4df11d249799c32d1808e79503b5"},
+    {file = "aiohttp-3.8.5-cp310-cp310-musllinux_1_1_s390x.whl", hash = "sha256:312fcfbacc7880a8da0ae8b6abc6cc7d752e9caa0051a53d217a650b25e9a691"},
+    {file = "aiohttp-3.8.5-cp310-cp310-musllinux_1_1_x86_64.whl", hash = "sha256:ad093e823df03bb3fd37e7dec9d4670c34f9e24aeace76808fc20a507cace825"},
+    {file = "aiohttp-3.8.5-cp310-cp310-win32.whl", hash = "sha256:33279701c04351a2914e1100b62b2a7fdb9a25995c4a104259f9a5ead7ed4802"},
+    {file = "aiohttp-3.8.5-cp310-cp310-win_amd64.whl", hash = "sha256:6e4a280e4b975a2e7745573e3fc9c9ba0d1194a3738ce1cbaa80626cc9b4f4df"},
+    {file = "aiohttp-3.8.5-cp311-cp311-macosx_10_9_universal2.whl", hash = "sha256:ae871a964e1987a943d83d6709d20ec6103ca1eaf52f7e0d36ee1b5bebb8b9b9"},
+    {file = "aiohttp-3.8.5-cp311-cp311-macosx_10_9_x86_64.whl", hash = "sha256:461908b2578955045efde733719d62f2b649c404189a09a632d245b445c9c975"},
+    {file = "aiohttp-3.8.5-cp311-cp311-macosx_11_0_arm64.whl", hash = "sha256:72a860c215e26192379f57cae5ab12b168b75db8271f111019509a1196dfc780"},
+    {file = "aiohttp-3.8.5-cp311-cp311-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:cc14be025665dba6202b6a71cfcdb53210cc498e50068bc088076624471f8bb9"},
+    {file = "aiohttp-3.8.5-cp311-cp311-manylinux_2_17_ppc64le.manylinux2014_ppc64le.whl", hash = "sha256:8af740fc2711ad85f1a5c034a435782fbd5b5f8314c9a3ef071424a8158d7f6b"},
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+    {file = "aiohttp-3.8.5-cp311-cp311-musllinux_1_1_aarch64.whl", hash = "sha256:62360cb771707cb70a6fd114b9871d20d7dd2163a0feafe43fd115cfe4fe845e"},
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+
+[[package]]
+name = "aiosignal"
+version = "1.3.1"
+requires_python = ">=3.7"
+summary = "aiosignal: a list of registered asynchronous callbacks"
+dependencies = [
+    "frozenlist>=1.1.0",
+]
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+
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 name = "anyio"
 version = "3.7.1"
@@ -11,11 +109,19 @@ dependencies = [
     "idna>=2.8",
     "sniffio>=1.1",
 ]
+files = [
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+]
 
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 name = "appnope"
 version = "0.1.3"
 summary = "Disable App Nap on macOS >= 10.9"
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+]
 
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 name = "argon2-cffi"
@@ -25,6 +131,10 @@ summary = "The secure Argon2 password hashing algorithm."
 dependencies = [
     "argon2-cffi-bindings",
 ]
+files = [
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+]
 
 [[package]]
 name = "argon2-cffi-bindings"
@@ -34,6 +144,29 @@ summary = "Low-level CFFI bindings for Argon2"
 dependencies = [
     "cffi>=1.0.1",
 ]
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+]
 
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 name = "arrow"
@@ -43,6 +176,55 @@ summary = "Better dates & times for Python"
 dependencies = [
     "python-dateutil>=2.7.0",
 ]
+files = [
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+
+[[package]]
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+version = "5.2.2"
+requires_python = ">=3.8"
+summary = "Astronomy and astrophysics core library"
+dependencies = [
+    "PyYAML>=3.13",
+    "numpy>=1.20",
+    "packaging>=19.0",
+    "pyerfa>=2.0",
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+]
 
 [[package]]
 name = "asttokens"
@@ -51,6 +233,10 @@ summary = "Annotate AST trees with source code positions"
 dependencies = [
     "six",
 ]
+files = [
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+]
 
 [[package]]
 name = "async-lru"
@@ -60,12 +246,30 @@ summary = "Simple LRU cache for asyncio"
 dependencies = [
     "typing-extensions>=4.0.0; python_version < \"3.11\"",
 ]
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+]
+
+[[package]]
+name = "async-timeout"
+version = "4.0.2"
+requires_python = ">=3.6"
+summary = "Timeout context manager for asyncio programs"
+files = [
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 version = "21.4.0"
 requires_python = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 summary = "Classes Without Boilerplate"
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 [[package]]
 name = "babel"
@@ -75,11 +279,19 @@ summary = "Internationalization utilities"
 dependencies = [
     "pytz>=2015.7; python_version < \"3.9\"",
 ]
+files = [
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 name = "backcall"
 version = "0.2.0"
 summary = "Specifications for callback functions passed in to an API"
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+]
 
 [[package]]
 name = "beautifulsoup4"
@@ -89,6 +301,10 @@ summary = "Screen-scraping library"
 dependencies = [
     "soupsieve>1.2",
 ]
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 [[package]]
 name = "black"
@@ -116,6 +356,30 @@ dependencies = [
     "ipython>=7.8.0",
     "tokenize-rt>=3.2.0",
 ]
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 [[package]]
 name = "bleach"
@@ -126,12 +390,33 @@ dependencies = [
     "six>=1.9.0",
     "webencodings",
 ]
+files = [
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+]
 
 [[package]]
 name = "bracex"
 version = "2.3.post1"
 requires_python = ">=3.7"
 summary = "Bash style brace expander."
+files = [
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+]
+
+[[package]]
+name = "branca"
+version = "0.6.0"
+requires_python = ">=3.7"
+summary = "Generate complex HTML+JS pages with Python"
+dependencies = [
+    "jinja2",
+]
+files = [
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+]
 
 [[package]]
 name = "bumpver"
@@ -146,18 +431,30 @@ dependencies = [
     "pathlib2",
     "toml",
 ]
+files = [
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+]
 
 [[package]]
 name = "cachetools"
 version = "5.3.1"
 requires_python = ">=3.7"
 summary = "Extensible memoizing collections and decorators"
+files = [
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 [[package]]
 name = "certifi"
 version = "2023.7.22"
 requires_python = ">=3.6"
 summary = "Python package for providing Mozilla's CA Bundle."
+files = [
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+]
 
 [[package]]
 name = "cffi"
@@ -166,24 +463,139 @@ summary = "Foreign Function Interface for Python calling C code."
 dependencies = [
     "pycparser",
 ]
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 name = "click"
@@ -193,6 +605,10 @@ summary = "Composable command line interface toolkit"
 dependencies = [
     "colorama; platform_system == \"Windows\"",
 ]
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@@ -201,6 +617,10 @@ summary = "An extension module for click to enable registering CLI commands via
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 name = "cligj"
@@ -210,18 +630,54 @@ summary = "Click params for commmand line interfaces to GeoJSON"
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 name = "comm"
@@ -231,6 +687,10 @@ summary = "Jupyter Python Comm implementation, for usage in ipykernel, xeus-pyth
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@@ -385,11 +1140,19 @@ dependencies = [
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 [[package]]
 name = "ghp-import"
@@ -398,6 +1161,10 @@ summary = "Copy your docs directly to the gh-pages branch."
 dependencies = [
     "python-dateutil>=2.8.1",
 ]
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@@ -407,11 +1174,63 @@ summary = "Signatures for entire Python programs. Extract the structure, the fra
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+    "json2html>=1",
+    "pandas>=1",
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 [[package]]
 name = "h3ronpy"
@@ -422,18 +1241,42 @@ dependencies = [
     "numpy",
     "pyarrow>=10.0",
 ]
+files = [
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+]
+
+[[package]]
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+version = "2.8.0"
+requires_python = ">=3.5"
+summary = "Calculate the distance between 2 points on Earth."
+files = [
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+]
 
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 version = "2.5.26"
 requires_python = ">=3.8"
 summary = "File identification library for Python"
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 name = "idna"
 version = "3.4"
 requires_python = ">=3.5"
 summary = "Internationalized Domain Names in Applications (IDNA)"
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+]
 
 [[package]]
 name = "importlib-metadata"
@@ -443,6 +1286,10 @@ summary = "Read metadata from Python packages"
 dependencies = [
     "zipp>=0.5",
 ]
+files = [
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+]
 
 [[package]]
 name = "importlib-resources"
@@ -452,12 +1299,20 @@ summary = "Read resources from Python packages"
 dependencies = [
     "zipp>=3.1.0; python_version < \"3.10\"",
 ]
+files = [
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+]
 
 [[package]]
 name = "iniconfig"
 version = "2.0.0"
 requires_python = ">=3.7"
 summary = "brain-dead simple config-ini parsing"
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+]
 
 [[package]]
 name = "ipykernel"
@@ -479,6 +1334,10 @@ dependencies = [
     "tornado>=6.1",
     "traitlets>=5.4.0",
 ]
+files = [
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+]
 
 [[package]]
 name = "ipython"
@@ -500,11 +1359,19 @@ dependencies = [
     "traitlets>=5",
     "typing-extensions; python_version < \"3.10\"",
 ]
+files = [
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+]
 
 [[package]]
 name = "ipython-genutils"
 version = "0.2.0"
 summary = "Vestigial utilities from IPython"
+files = [
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+]
 
 [[package]]
 name = "ipywidgets"
@@ -518,6 +1385,10 @@ dependencies = [
     "traitlets>=4.3.1",
     "widgetsnbextension~=3.6.4",
 ]
+files = [
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+]
 
 [[package]]
 name = "isoduration"
@@ -527,6 +1398,10 @@ summary = "Operations with ISO 8601 durations"
 dependencies = [
     "arrow>=0.15.0",
 ]
+files = [
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+]
 
 [[package]]
 name = "jedi"
@@ -536,6 +1411,10 @@ summary = "An autocompletion tool for Python that can be used for text editors."
 dependencies = [
     "parso<0.9.0,>=0.8.0",
 ]
+files = [
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+]
 
 [[package]]
 name = "jinja2"
@@ -545,12 +1424,20 @@ summary = "A very fast and expressive template engine."
 dependencies = [
     "MarkupSafe>=2.0",
 ]
+files = [
+    {file = "Jinja2-3.1.2-py3-none-any.whl", hash = "sha256:6088930bfe239f0e6710546ab9c19c9ef35e29792895fed6e6e31a023a182a61"},
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+]
 
 [[package]]
 name = "joblib"
 version = "1.3.1"
 requires_python = ">=3.7"
 summary = "Lightweight pipelining with Python functions"
+files = [
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+]
 
 [[package]]
 name = "jsbeautifier"
@@ -560,17 +1447,36 @@ dependencies = [
     "editorconfig>=0.12.2",
     "six>=1.13.0",
 ]
+files = [
+    {file = "jsbeautifier-1.14.9.tar.gz", hash = "sha256:c738ebc36b47bd94e4ca6dd17a9004c3cc74edad582ca1d60e0e5d5945a63cb9"},
+]
+
+[[package]]
+name = "json2html"
+version = "1.3.0"
+summary = "JSON to HTML Table Representation"
+files = [
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+]
 
 [[package]]
 name = "json5"
 version = "0.9.14"
 summary = "A Python implementation of the JSON5 data format."
+files = [
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+]
 
 [[package]]
 name = "jsonpointer"
 version = "2.4"
 requires_python = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, !=3.6.*"
 summary = "Identify specific nodes in a JSON document (RFC 6901) "
+files = [
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+    {file = "jsonpointer-2.4.tar.gz", hash = "sha256:585cee82b70211fa9e6043b7bb89db6e1aa49524340dde8ad6b63206ea689d88"},
+]
 
 [[package]]
 name = "jsonschema"
@@ -583,6 +1489,10 @@ dependencies = [
     "pkgutil-resolve-name>=1.3.10; python_version < \"3.9\"",
     "pyrsistent!=0.17.0,!=0.17.1,!=0.17.2,>=0.14.0",
 ]
+files = [
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+    {file = "jsonschema-4.17.3.tar.gz", hash = "sha256:0f864437ab8b6076ba6707453ef8f98a6a0d512a80e93f8abdb676f737ecb60d"},
+]
 
 [[package]]
 name = "jsonschema"
@@ -601,6 +1511,10 @@ dependencies = [
     "uri-template",
     "webcolors>=1.11",
 ]
+files = [
+    {file = "jsonschema-4.17.3-py3-none-any.whl", hash = "sha256:a870ad254da1a8ca84b6a2905cac29d265f805acc57af304784962a2aa6508f6"},
+    {file = "jsonschema-4.17.3.tar.gz", hash = "sha256:0f864437ab8b6076ba6707453ef8f98a6a0d512a80e93f8abdb676f737ecb60d"},
+]
 
 [[package]]
 name = "jupyter-client"
@@ -615,6 +1529,10 @@ dependencies = [
     "tornado>=6.2",
     "traitlets>=5.3",
 ]
+files = [
+    {file = "jupyter_client-8.3.0-py3-none-any.whl", hash = "sha256:7441af0c0672edc5d28035e92ba5e32fadcfa8a4e608a434c228836a89df6158"},
+    {file = "jupyter_client-8.3.0.tar.gz", hash = "sha256:3af69921fe99617be1670399a0b857ad67275eefcfa291e2c81a160b7b650f5f"},
+]
 
 [[package]]
 name = "jupyter-core"
@@ -626,6 +1544,10 @@ dependencies = [
     "pywin32>=300; sys_platform == \"win32\" and platform_python_implementation != \"PyPy\"",
     "traitlets>=5.3",
 ]
+files = [
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+    {file = "jupyter_core-5.3.1.tar.gz", hash = "sha256:5ba5c7938a7f97a6b0481463f7ff0dbac7c15ba48cf46fa4035ca6e838aa1aba"},
+]
 
 [[package]]
 name = "jupyter-events"
@@ -640,6 +1562,10 @@ dependencies = [
     "rfc3986-validator>=0.1.1",
     "traitlets>=5.3",
 ]
+files = [
+    {file = "jupyter_events-0.6.3-py3-none-any.whl", hash = "sha256:57a2749f87ba387cd1bfd9b22a0875b889237dbf2edc2121ebb22bde47036c17"},
+    {file = "jupyter_events-0.6.3.tar.gz", hash = "sha256:9a6e9995f75d1b7146b436ea24d696ce3a35bfa8bfe45e0c33c334c79464d0b3"},
+]
 
 [[package]]
 name = "jupyter-lsp"
@@ -650,6 +1576,10 @@ dependencies = [
     "importlib-metadata>=4.8.3; python_version < \"3.10\"",
     "jupyter-server>=1.1.2",
 ]
+files = [
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+]
 
 [[package]]
 name = "jupyter-server"
@@ -677,6 +1607,10 @@ dependencies = [
     "traitlets>=5.6.0",
     "websocket-client",
 ]
+files = [
+    {file = "jupyter_server-2.7.0-py3-none-any.whl", hash = "sha256:6a77912aff643e53fa14bdb2634884b52b784a4be77ce8e93f7283faed0f0849"},
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+]
 
 [[package]]
 name = "jupyter-server-terminals"
@@ -687,6 +1621,10 @@ dependencies = [
     "pywinpty>=2.0.3; os_name == \"nt\"",
     "terminado>=0.8.3",
 ]
+files = [
+    {file = "jupyter_server_terminals-0.4.4-py3-none-any.whl", hash = "sha256:75779164661cec02a8758a5311e18bb8eb70c4e86c6b699403100f1585a12a36"},
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+]
 
 [[package]]
 name = "jupyterlab"
@@ -709,12 +1647,20 @@ dependencies = [
     "tornado>=6.2.0",
     "traitlets",
 ]
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 name = "jupytext"
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 summary = "Variable width build numbers with lexical ordering."
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 [[package]]
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@@ -787,17 +1827,89 @@ dependencies = [
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 ]
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+dependencies = [
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+    "numpy>=1.3",
+    "pandas>=1.0",
+    "scikit-learn",
+    "scipy>=1.0",
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 ]
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 name = "matplotlib-inline"
@@ -849,6 +2055,10 @@ summary = "Inline Matplotlib backend for Jupyter"
 dependencies = [
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 ]
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 summary = "Markdown URL utilities"
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 requires_python = ">=3.6"
 summary = "A deep merge function for 🐍."
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 name = "mike"
@@ -881,12 +2103,20 @@ dependencies = [
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 ]
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 version = "3.0.1"
 requires_python = ">=3.7"
 summary = "A sane and fast Markdown parser with useful plugins and renderers"
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 name = "mkdocs"
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 name = "mkdocs-autorefs"
@@ -916,6 +2150,10 @@ dependencies = [
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 ]
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 name = "mkdocs-awesome-pages-plugin"
@@ -927,6 +2165,10 @@ dependencies = [
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 ]
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 name = "mkdocs-gen-files"
@@ -936,6 +2178,10 @@ summary = "MkDocs plugin to programmatically generate documentation pages during
 dependencies = [
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 ]
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 name = "mkdocs-jupyter"
@@ -950,6 +2196,10 @@ dependencies = [
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 ]
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 name = "mkdocs-material"
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 requires_python = ">=3.7"
 summary = "Extension pack for Python Markdown and MkDocs Material."
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 [[package]]
 name = "mkdocs-mermaid2-plugin"
@@ -987,6 +2245,10 @@ dependencies = [
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 ]
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 [[package]]
 name = "mkdocstrings"
@@ -1003,6 +2265,10 @@ dependencies = [
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 ]
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 [[package]]
 name = "mkdocstrings-python"
@@ -1013,6 +2279,10 @@ dependencies = [
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     "mkdocstrings>=0.20",
 ]
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 [[package]]
 name = "mkdocstrings"
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 ]
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@@ -1396,6 +3428,10 @@ summary = "A pytest plugin that allows multiple failures per test."
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@@ -1405,6 +3441,10 @@ summary = "Thin-wrapper around the mock package for easier use with pytest"
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 ]
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 name = "pytest-parametrization"
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 [[package]]
 name = "requests"
@@ -1498,6 +3756,10 @@ dependencies = [
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 ]
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+]
 
 [[package]]
 name = "requests-mock"
@@ -1507,6 +3769,10 @@ dependencies = [
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     "six",
 ]
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 name = "requirements-parser"
@@ -1516,6 +3782,10 @@ summary = "This is a small Python module for parsing Pip requirement files."
 dependencies = [
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 ]
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 name = "rfc3339-validator"
@@ -1525,12 +3795,20 @@ summary = "A pure python RFC3339 validator"
 dependencies = [
     "six",
 ]
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 version = "0.1.1"
 requires_python = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 summary = "Pure python rfc3986 validator"
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 [[package]]
 name = "rich"
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 version = "0.0.280"
 requires_python = ">=3.7"
 summary = "An extremely fast Python linter, written in Rust."
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 name = "s2"
@@ -1564,6 +3904,10 @@ dependencies = [
     "s2sphere",
     "shapely",
 ]
+files = [
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 [[package]]
 name = "s2sphere"
@@ -1572,6 +3916,10 @@ summary = "Python implementation of the S2 Geometry Library"
 dependencies = [
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 ]
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 name = "scalene"
@@ -1585,6 +3933,21 @@ dependencies = [
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 name = "scikit-learn"
@@ -1597,6 +3960,29 @@ dependencies = [
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 ]
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 [[package]]
 name = "stack-data"
@@ -1655,12 +4141,43 @@ dependencies = [
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     "pure-eval",
 ]
+files = [
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+
+[[package]]
+name = "sympy"
+version = "1.12"
+requires_python = ">=3.8"
+summary = "Computer algebra system (CAS) in Python"
+dependencies = [
+    "mpmath>=0.19",
+]
+files = [
+    {file = "sympy-1.12-py3-none-any.whl", hash = "sha256:c3588cd4295d0c0f603d0f2ae780587e64e2efeedb3521e46b9bb1d08d184fa5"},
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 version = "0.9.0"
 requires_python = ">=3.7"
 summary = "Pretty-print tabular data"
+files = [
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+
+[[package]]
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+requires_python = ">=3.6"
+summary = "Retry code until it succeeds"
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+]
 
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 name = "terminado"
@@ -1672,12 +4189,20 @@ dependencies = [
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     "tornado>=6.1.0",
 ]
+files = [
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 name = "threadpoolctl"
 version = "3.2.0"
 requires_python = ">=3.8"
 summary = "threadpoolctl"
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 name = "tinycss2"
@@ -1687,24 +4212,40 @@ summary = "A tiny CSS parser"
 dependencies = [
     "webencodings>=0.4",
 ]
+files = [
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 requires_python = ">=3.8"
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 summary = "Python Library for Tom's Obvious, Minimal Language"
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 version = "2.0.1"
 requires_python = ">=3.7"
 summary = "A lil' TOML parser"
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 [[package]]
 name = "topojson"
@@ -1714,12 +4255,92 @@ dependencies = [
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     "shapely",
 ]
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+[[package]]
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+summary = "Tensors and Dynamic neural networks in Python with strong GPU acceleration"
+dependencies = [
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+    "jinja2",
+    "networkx",
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+    "nvidia-cuda-cupti-cu11==11.7.101; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-cuda-nvrtc-cu11==11.7.99; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-cuda-runtime-cu11==11.7.99; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-cudnn-cu11==8.5.0.96; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-cufft-cu11==10.9.0.58; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-curand-cu11==10.2.10.91; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-cusolver-cu11==11.4.0.1; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-cusparse-cu11==11.7.4.91; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-nccl-cu11==2.14.3; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "nvidia-nvtx-cu11==11.7.91; platform_system == \"Linux\" and platform_machine == \"x86_64\"",
+    "sympy",
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+requires_python = ">=3.8"
+summary = "PyTorch native Metrics"
+dependencies = [
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+    "numpy>1.20.0",
+    "packaging",
+    "torch>=1.8.1",
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 name = "tornado"
 version = "6.3.2"
 requires_python = ">= 3.8"
 summary = "Tornado is a Python web framework and asynchronous networking library, originally developed at FriendFeed."
+files = [
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 [[package]]
 name = "tox"
@@ -1738,6 +4359,10 @@ dependencies = [
     "tomli>=2.0.1; python_version < \"3.11\"",
     "virtualenv>=20.23.1",
 ]
+files = [
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 [[package]]
 name = "tox-pdm"
@@ -1748,6 +4373,10 @@ dependencies = [
     "tomli; python_version < \"3.11\"",
     "tox>=3.18.0",
 ]
+files = [
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+]
 
 [[package]]
 name = "tqdm"
@@ -1757,12 +4386,20 @@ summary = "Fast, Extensible Progress Meter"
 dependencies = [
     "colorama; platform_system == \"Windows\"",
 ]
+files = [
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 name = "traitlets"
 version = "5.9.0"
 requires_python = ">=3.7"
 summary = "Traitlets Python configuration system"
+files = [
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+]
 
 [[package]]
 name = "traittypes"
@@ -1771,6 +4408,37 @@ summary = "Scipy trait types"
 dependencies = [
     "traitlets>=4.2.2",
 ]
+files = [
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+
+[[package]]
+name = "triton"
+version = "2.0.0"
+summary = "A language and compiler for custom Deep Learning operations"
+dependencies = [
+    "cmake",
+    "filelock",
+    "lit",
+    "torch",
+]
+files = [
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@@ -1789,28 +4461,48 @@ summary = "Typing stubs for requests"
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@@ -1872,34 +4622,58 @@ summary = "Wildcard/glob file name matcher."
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@@ -1908,2003 +4682,90 @@ summary = "IPython HTML widgets for Jupyter"
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From 6adda7445c6daadc2896f6381fd6c54f52e37dda Mon Sep 17 00:00:00 2001
From: Piotr <p.gramacki@gmail.com>
Date: Fri, 18 Aug 2023 11:50:18 +0200
Subject: [PATCH 14/16] fix: update import paths

---
 examples/downloaders/gtfs_downloader.ipynb | 13 +++++++++++--
 srai/downloaders/gtfs_downloader.py        |  2 +-
 2 files changed, 12 insertions(+), 3 deletions(-)

diff --git a/examples/downloaders/gtfs_downloader.ipynb b/examples/downloaders/gtfs_downloader.ipynb
index 23f89ec0..28057354 100644
--- a/examples/downloaders/gtfs_downloader.ipynb
+++ b/examples/downloaders/gtfs_downloader.ipynb
@@ -15,7 +15,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "downloader = GTFSDownloader()"
+    "downloader = GTFSDownloader(update_catalog=True)"
    ]
   },
   {
@@ -45,6 +45,15 @@
     "wro_gdf = ox.geocode_to_gdf(\"Wrocław, PL\")"
    ]
   },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "downloader.catalog[downloader.catalog.intersects(wro_gdf[\"geometry\"].iloc[0])]"
+   ]
+  },
   {
    "cell_type": "code",
    "execution_count": null,
@@ -53,7 +62,7 @@
    "source": [
     "ax = (\n",
     "    downloader.catalog[downloader.catalog.intersects(wro_gdf[\"geometry\"].iloc[0])]\n",
-    "    .iloc[[5]]\n",
+    "    .iloc[[6]]\n",
     "    .plot(alpha=0.5)\n",
     ")\n",
     "wro_gdf.plot(ax=ax, color=\"red\")"
diff --git a/srai/downloaders/gtfs_downloader.py b/srai/downloaders/gtfs_downloader.py
index c0b51497..1c2abe4d 100644
--- a/srai/downloaders/gtfs_downloader.py
+++ b/srai/downloaders/gtfs_downloader.py
@@ -16,8 +16,8 @@
 from functional import seq
 from shapely.geometry import box
 
+from srai.constants import WGS84_CRS
 from srai.utils import download_file
-from srai.utils.constants import WGS84_CRS
 
 CATALOG_URL = "https://bit.ly/catalogs-csv"
 CACHE_DIR = Path.home() / ".cache" / "srai"

From 9516798d92932f53f69f2fdf9c227f7644d4fdc7 Mon Sep 17 00:00:00 2001
From: Piotr Gramacki <p.gramacki@gmail.com>
Date: Wed, 1 Nov 2023 17:02:31 +0100
Subject: [PATCH 15/16] chore: update CHANGELOG

---
 CHANGELOG.md | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index f2ab4233..6cce2e9c 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -9,6 +9,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ### Added
 
+- Downloader for GTFS files from [The Mobility Database](https://database.mobilitydata.org/)
+
 ### Changed
 
 ### Deprecated

From a634b2cd61259bdaf21633ff3e7ce0115e23fdfc Mon Sep 17 00:00:00 2001
From: Piotr Gramacki <p.gramacki@gmail.com>
Date: Wed, 1 Nov 2023 17:04:02 +0100
Subject: [PATCH 16/16] fix: remove unused refurb config from pyproject.toml

---
 pyproject.toml | 3 ---
 1 file changed, 3 deletions(-)

diff --git a/pyproject.toml b/pyproject.toml
index c21545b2..420f0149 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -226,6 +226,3 @@ ignore_packages = [
     'nvidia-nccl-cu11',         # uses NVIDIA license
     'nvidia-nvtx-cu11',         # uses NVIDIA license
 ]
-
-[tool.refurb]
-disable = ["FURB124"]