-
Notifications
You must be signed in to change notification settings - Fork 2
/
Copy pathNAMESPACE
153 lines (152 loc) · 5.31 KB
/
NAMESPACE
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
# Generated by roxygen2: do not edit by hand
S3method(AddControlData,ProcessReptMeas)
S3method(AddControlData,ProcessReptMeasChngBaseline)
S3method(AddControlData,ProcessSingleTimeOutcome)
S3method(CheckISAEnrollmentStatus,default)
S3method(CheckNextTrialAnalysisTime,default)
S3method(CheckTrialMonitor,default)
S3method(ComputePosteriorProbs,MAVOnly)
S3method(ComputePosteriorProbs,MAVTarget)
S3method(ComputePosteriorProbs,default)
S3method(CopyCovariates,default)
S3method(CreateDataSetForAnalysis,default)
S3method(EstimateNumberOfPatientsToSimulate,"NULL")
S3method(EstimateNumberOfPatientsToSimulate,Categorical)
S3method(EstimateNumberOfPatientsToSimulate,default)
S3method(GetBayesianCutoffs,MAVOnly)
S3method(GetBayesianCutoffs,MAVTarget)
S3method(GetBayesianCutoffs,default)
S3method(GetFinalISAAnalysisTime,default)
S3method(InitializeISARandomizer,DelayedStartRandomizer)
S3method(InitializeISARandomizer,EqualRandomizer)
S3method(InitializeISARandomizer,POCRandomizer)
S3method(InitializeISARandomizer,default)
S3method(InitializePatientList,default)
S3method(InitializeTrialRandomizer,default)
S3method(MakeDecision,General)
S3method(MakeDecision,Outcome1Only)
S3method(MakeDecision,Outcome2Only)
S3method(MakeDecision,TwoOutcomeOption1)
S3method(MakeDecision,TwoOutcomeOption11)
S3method(MakeDecision,TwoOutcomeOption2)
S3method(MakeDecision,TwoOutcomeOption3)
S3method(MakeDecision,TwoOutcomeOption4)
S3method(MakeDecision,TwoOutcomeOption5)
S3method(MakeDecision,TwoOutcomeOption7)
S3method(MakeDecision,default)
S3method(MakeDecisionBasedOnPostProb,MAVOnly)
S3method(MakeDecisionBasedOnPostProb,MAVTarget)
S3method(MakeDecisionBasedOnPostProb,default)
S3method(MakeDecisionDoses,AtLeastOne)
S3method(MakeDecisionDoses,HighDoseOnly)
S3method(MakeDecisionDoses,MakeDecisionMCPMod)
S3method(MakeDecisionDoses,default)
S3method(MakeTrialDecision,default)
S3method(ProcessData,ProcessReptMeas)
S3method(ProcessData,ProcessReptMeasChngBaseline)
S3method(ProcessData,ProcessSingleTimeOutcome)
S3method(ProcessData,default)
S3method(Randomize,default)
S3method(RandomizeBetweenISA,default)
S3method(RandomizeWithinISA,DelayedStartRandomizer)
S3method(RandomizeWithinISA,EqualRandomizer)
S3method(RandomizeWithinISA,POCRandomizer)
S3method(RandomizeWithinISA,default)
S3method(RunAnalysis,AOV)
S3method(RunAnalysis,AOVPerDose)
S3method(RunAnalysis,BayesianNormal)
S3method(RunAnalysis,MCPModAnalysis)
S3method(RunAnalysis,Ranked)
S3method(RunAnalysis,RankedExact)
S3method(RunAnalysis,RankedPerDose)
S3method(RunAnalysis,RankedPerDoseExact)
S3method(RunAnalysis,ReptMeasAnalysis)
S3method(RunAnalysis,ReptMeasAnalysisPerDose)
S3method(RunAnalysis,TTest)
S3method(RunAnalysis,TTestPerDose)
S3method(RunAnalysis,default)
S3method(RunFinalTrialAnalysis,IncludeAllControl)
S3method(RunFinalTrialAnalysis,default)
S3method(RunISAAnalysis,DoseRanging)
S3method(RunISAAnalysis,default)
S3method(RunRealTrialAnalysis,default)
S3method(RunSimulation,default)
S3method(RunTrialAnalysis,default)
S3method(SimPatientOutcomes,Correlated)
S3method(SimPatientOutcomes,Independent)
S3method(SimPatientOutcomes,MVN)
S3method(SimPatientOutcomes,MVNByGroup)
S3method(SimPatientOutcomes,MVNWithCovariates)
S3method(SimPatientOutcomes,default)
S3method(SimulateAllISAStartTimes,default)
S3method(SimulateAllPatientCovariates,default)
S3method(SimulateAllPatientOutcomes,default)
S3method(SimulateISAStartTime,SetTime)
S3method(SimulateISAStartTime,Uniform)
S3method(SimulateISAStartTime,default)
S3method(SimulatePatientCovariates,Categorical)
S3method(SimulatePatientCovariates,default)
S3method(SimulateScenario,default)
S3method(SimulateSingleTrial,default)
S3method(SubsetData,AllControls)
S3method(SubsetData,NoBorrowing)
S3method(SubsetData,TrialData)
S3method(UpdateRandomizer,Outcome1Only)
S3method(UpdateRandomizer,Outcome2Only)
S3method(UpdateRandomizer,default)
export(AddControlData)
export(AddPatient)
export(AppendPatientLists)
export(BuildSimulationResultsDataSet)
export(CheckGlobalVariables)
export(CheckISAEnrollmentStatus)
export(CheckNextTrialAnalysisTime)
export(CheckTrialMonitor)
export(ComputePosteriorProbs)
export(CopyControlCovariates)
export(CopyCovariates)
export(CreateDataSetForAnalysis)
export(CreateProject)
export(EstimateNumberOfPatientsToSimulate)
export(GetBayesianCutoffs)
export(GetCILimits)
export(GetFinalISAAnalysisTime)
export(GetLSDiffGLS)
export(InitializeISARandomizer)
export(InitializePatientList)
export(InitializeTrialRandomizer)
export(MakeDecision)
export(MakeDecisionBasedOnCI)
export(MakeDecisionBasedOnPostProb)
export(MakeDecisionDoses)
export(MakeTrialDecision)
export(NewAccrualProcess)
export(PlotPlatformRecruitment)
export(ProcessData)
export(Randomize)
export(RandomizeBetweenISA)
export(RandomizeWithinISA)
export(ReturnNextTreatment)
export(RunAnalysis)
export(RunExample)
export(RunFinalTrialAnalysis)
export(RunISAAnalysis)
export(RunRealTrialAnalysis)
export(RunSimulation)
export(RunTrialAnalysis)
export(SelectList)
export(SetRunningEnvironment)
export(SimPatientOutcomes)
export(SimulateAccrual)
export(SimulateAllISAStartTimes)
export(SimulateAllPatientCovariates)
export(SimulateAllPatientOutcomes)
export(SimulateISAStartTime)
export(SimulatePatientCovariates)
export(SimulateScenario)
export(SimulateSingleTrial)
export(SubsetData)
export(UpdateRandomizer)
export(ggPlotPlatformRecruitment)
exportMethods(SimulateAdditionalArrivalTimes)
exportMethods(SimulateArrivalTimes)