.gitignore

# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
*$py.class

# C extensions
*.so

# Distribution / packaging
.Python
env/
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib/
lib64/
parts/
sdist/
var/
wheels/
*.egg-info/
.installed.cfg
*.egg

# PyInstaller
#  Usually these files are written by a python script from a template
#  before PyInstaller builds the exe, so as to inject date/other infos into it.
*.manifest
*.spec

# Installer logs
pip-log.txt
pip-delete-this-directory.txt

# Unit test / coverage reports
htmlcov/
.tox/
.coverage
.coverage.*
.cache
.pytest_cache
nosetests.xml
coverage.xml
*.cover
.hypothesis/

# Translations
*.mo
*.pot

# Django stuff:
*.log
local_settings.py

# Flask stuff:
instance/
.webassets-cache

# Scrapy stuff:
.scrapy

# Sphinx documentation
docs/_build/

# PyBuilder
target/

# Jupyter Notebook
.ipynb_checkpoints

# pyenv
.python-version

# celery beat schedule file
celerybeat-schedule

# SageMath parsed files
*.sage.py

# dotenv
.env

# virtualenv
.venv
venv/
ENV/

# Spyder project settings
.spyderproject
.spyproject

# Rope project settings
.ropeproject

# mkdocs documentation
/site

# mypy
.mypy_cache/

# profraw files from LLVM? Unclear exactly what triggers this
# There are reports this comes from LLVM profiling, but also Xcode 9.
*profraw
holodeck/tests/converted_notebooks
ms.pdf
holodeck.code-workspace
docs/holodeck-paper/src/out
.vscode/
output/*
*.png
*.pdf
# analysis
docs/source/apidoc_modules
hostfile
readthedocs.html
notes.md
minos_run_gen_lib_sams.sh
cyutils.c
cyutils.html
cyutils_api.h
logs/
slurm*
*.out
*.err
run_gen_lib_sams__*
*.npz
*.bin
*.ini
*.c
*.html
.gitattributes
*.slurm

# Mac Desktop Services
.DS_Store
.history