diff --git a/.github/workflows/ingest-gisaid-branch.yml b/.github/workflows/fetch-and-ingest-gisaid-branch.yml similarity index 84% rename from .github/workflows/ingest-gisaid-branch.yml rename to .github/workflows/fetch-and-ingest-gisaid-branch.yml index 822aad9d..fe36f5e7 100644 --- a/.github/workflows/ingest-gisaid-branch.yml +++ b/.github/workflows/fetch-and-ingest-gisaid-branch.yml @@ -1,4 +1,4 @@ -name: '[branch] Ingest 2019-nCov/SARS-CoV-2 data from GISAID for nextstrain.org/ncov' +name: '[branch] Fetch & Ingest 2019-nCov/SARS-CoV-2 data from GISAID for nextstrain.org/ncov' on: push: @@ -18,7 +18,7 @@ jobs: python3 -m pip install --upgrade pip setuptools python3 -m pip install pipenv pipenv sync - pipenv run ./bin/ingest-gisaid + pipenv run ./bin/ingest-gisaid --fetch env: AWS_DEFAULT_REGION: ${{ secrets.AWS_DEFAULT_REGION }} AWS_ACCESS_KEY_ID: ${{ secrets.AWS_ACCESS_KEY_ID }} diff --git a/.github/workflows/fetch-and-ingest-gisaid-master.yml b/.github/workflows/fetch-and-ingest-gisaid-master.yml new file mode 100644 index 00000000..b9c07105 --- /dev/null +++ b/.github/workflows/fetch-and-ingest-gisaid-master.yml @@ -0,0 +1,27 @@ +name: 'Fetch & Ingest 2019-nCov/SARS-CoV-2 data from GISAID for nextstrain.org/ncov' + +on: + # Manually triggered using `./bin/trigger fetch-and-ingest` + repository_dispatch: + types: fetch-and-ingest + +jobs: + ingest: + runs-on: ubuntu-latest + steps: + - uses: actions/checkout@v1 + - name: ingest + run: | + PATH="$HOME/.local/bin:$PATH" + python3 -m pip install --upgrade pip setuptools + python3 -m pip install pipenv + pipenv sync + pipenv run ./bin/ingest-gisaid --fetch + env: + AWS_DEFAULT_REGION: ${{ secrets.AWS_DEFAULT_REGION }} + AWS_ACCESS_KEY_ID: ${{ secrets.AWS_ACCESS_KEY_ID }} + AWS_SECRET_ACCESS_KEY: ${{ secrets.AWS_SECRET_ACCESS_KEY }} + GISAID_API_ENDPOINT: ${{ secrets.GISAID_API_ENDPOINT }} + GISAID_USERNAME_AND_PASSWORD: ${{ secrets.GISAID_USERNAME_AND_PASSWORD }} + SLACK_TOKEN: ${{ secrets.SLACK_TOKEN }} + SLACK_CHANNELS: ncov-gisaid-updates diff --git a/.github/workflows/ingest-gisaid-master.yml b/.github/workflows/ingest-gisaid-master.yml index 96aa786d..eef65ec3 100644 --- a/.github/workflows/ingest-gisaid-master.yml +++ b/.github/workflows/ingest-gisaid-master.yml @@ -29,7 +29,5 @@ jobs: AWS_DEFAULT_REGION: ${{ secrets.AWS_DEFAULT_REGION }} AWS_ACCESS_KEY_ID: ${{ secrets.AWS_ACCESS_KEY_ID }} AWS_SECRET_ACCESS_KEY: ${{ secrets.AWS_SECRET_ACCESS_KEY }} - GISAID_API_ENDPOINT: ${{ secrets.GISAID_API_ENDPOINT }} - GISAID_USERNAME_AND_PASSWORD: ${{ secrets.GISAID_USERNAME_AND_PASSWORD }} SLACK_TOKEN: ${{ secrets.SLACK_TOKEN }} SLACK_CHANNELS: ncov-gisaid-updates diff --git a/README.md b/README.md index 60674599..c24df5ee 100644 --- a/README.md +++ b/README.md @@ -11,15 +11,23 @@ If you're using Pipenv (see below), then run commands from `./bin/…` inside a ## Running automatically The ingest pipeline exists as the GitHub workflows `.github/workflows/ingest-master-*.yml` and `…/ingest-branch-*.yml`. -It is run on pushes to `master` that modify `source-data/annotations.tsv` and on pushes to other branches. +It is run on pushes to `master` that modify `source-data/*-annotations.tsv` and on pushes to other branches. Pushes to branches other than `master` upload files to branch-specific paths in the S3 bucket, don't send notifications, and don't trigger Nextstrain rebuilds, so that they don't interfere with the production data. AWS credentials are stored in this repository's secrets and are associated with the `nextstrain-ncov-ingest-uploader` IAM user in the Bedford Lab AWS account, which is locked down to reading and publishing only the `gisaid.ndjson`, `metadata.tsv`, and `sequences.fasta` files and their zipped equivalents in the `nextstrain-ncov-private` S3 bucket. ## Manually triggering the automation -You can manually trigger the full automation by running `./bin/trigger ingest --user `. -If you want to only trigger a rebuild of [nextstrain/ncov](https://github.com/nextstrain/ncov) without re-ingesting data from GISAID first, run `./bin/trigger rebuild --user `. -See the output of `./bin/trigger ingest` or `./bin/trigger rebuild` for more information about authentication with GitHub. +A full run is a now done in 3 steps via manual triggers: +1. Fetch new sequences and ingest them by running `./bin/trigger fetch-and-ingest --user `. +2. Add manual annotations, update location hierarchy as needed, and run ingest without fetching new sequences. + * Pushes of `source-data/*-annotations.tsv` to the master branch will automatically trigger a run of ingest. + * You can also run ingest manually by running `./bin/trigger ingest --user `. +3. Once all manual fixes are complete, trigger a rebuild of [nextstrain/ncov](https://github.com/nextstrain/ncov) by running `./bin/trigger rebuild --user `. + +See the output of `./bin/trigger fetch-and-ingest --user `, `./bin/trigger ingest` or `./bin/trigger rebuild` for more information about authentication with GitHub. + +Note: running `./bin/trigger` posts a GitHub `repository_dispatch`. +Regardless of which branch you are on, it will trigger the specified action on the master branch. ## Updating manual annotations Manual annotations should be added to `source-data/gisaid_annotations.tsv`. diff --git a/bin/ingest-gisaid b/bin/ingest-gisaid index 912c2db8..74c07154 100755 --- a/bin/ingest-gisaid +++ b/bin/ingest-gisaid @@ -1,69 +1,117 @@ #!/bin/bash +# usage: ingest-gisaid [--fetch] +# ingest-gisaid --help +# +# Ingest SARS-CoV-2 metadata and sequences from GISAID. +# +# If the --fetch flag is given, new records are fetched from GISAID. Otherwise, +# ingest from the existing GISAID NDJSON file on S3. +# set -euo pipefail : "${S3_SRC:=s3://nextstrain-ncov-private}" : "${S3_DST:=$S3_SRC}" -# Determine where to save data files based on if we're running as a result of a -# push to master or to another branch (or locally, outside of the GitHub -# workflow). Files are always compared to the default/primary paths in the -# source S3 bucket. -# -silent= -branch= +main() { + local fetch=0 + + for arg; do + case "$arg" in + -h|--help) + print-help + exit + ;; + --fetch) + fetch=1 + shift + break + ;; + esac + done + + # Determine where to save data files based on if we're running as a result of a + # push to master or to another branch (or locally, outside of the GitHub + # workflow). Files are always compared to the default/primary paths in the + # source S3 bucket. + # + local silent= + local branch= + + case "${GITHUB_REF:-}" in + refs/heads/master) + # Do nothing different; defaults above are good. + branch=master + ;; + refs/heads/*) + # Save data files under a per-branch prefix + silent=yes + branch="${GITHUB_REF##refs/heads/}" + S3_DST="$S3_DST/branch/$branch" + ;; + "") + # Save data files under a tmp prefix + silent=yes + S3_DST="$S3_DST/tmp" + ;; + *) + echo "Skipping ingest for ref $GITHUB_REF" + exit 0 + ;; + esac + + echo "S3_SRC is $S3_SRC" + echo "S3_DST is $S3_DST" -case "${GITHUB_REF:-}" in - refs/heads/master) - # Do nothing different; defaults above are good. - branch=master - ;; - refs/heads/*) - # Save data files under a per-branch prefix - silent=yes - branch="${GITHUB_REF##refs/heads/}" - S3_DST="$S3_DST/branch/$branch" - ;; - "") - # Save data files under a tmp prefix - silent=yes - S3_DST="$S3_DST/tmp" - ;; - *) - echo "Skipping ingest for ref $GITHUB_REF" - exit 0 - ;; -esac + cd "$(dirname "$0")/.." -echo "S3_SRC is $S3_SRC" -echo "S3_DST is $S3_DST" + set -x -cd "$(dirname "$0")/.." + if [[ "$fetch" == 1 ]]; then + ./bin/fetch-from-gisaid > data/gisaid.ndjson + if [[ "$branch" == master ]]; then + ./bin/notify-on-record-change data/gisaid.ndjson "$S3_SRC/gisaid.ndjson.gz" "GISAID" + fi + ./bin/upload-to-s3 --quiet data/gisaid.ndjson "$S3_DST/gisaid.ndjson.gz" + else + aws s3 cp --no-progress "$S3_DST/gisaid.ndjson.gz" - | gunzip -cfq > data/gisaid.ndjson + fi -set -x + ./bin/transform-gisaid data/gisaid.ndjson \ + --output-metadata data/gisaid/metadata.tsv \ + --output-fasta data/gisaid/sequences.fasta -./bin/fetch-from-gisaid > data/gisaid.ndjson -if [[ "$branch" == master ]]; then - ./bin/notify-on-record-change data/gisaid.ndjson "$S3_SRC/gisaid.ndjson.gz" "GISAID" -fi -./bin/upload-to-s3 --quiet data/gisaid.ndjson "$S3_DST/gisaid.ndjson.gz" + ./bin/flag-metadata data/gisaid/metadata.tsv > data/gisaid/flagged_metadata.txt + ./bin/check-locations data/gisaid/metadata.tsv \ + data/gisaid/location_hierarchy.tsv \ + gisaid_epi_isl -./bin/transform-gisaid data/gisaid.ndjson \ - --output-metadata data/gisaid/metadata.tsv \ - --output-fasta data/gisaid/sequences.fasta + if [[ "$branch" == master ]]; then + ./bin/notify-on-metadata-change data/gisaid/metadata.tsv "$S3_SRC/metadata.tsv.gz" gisaid_epi_isl + ./bin/notify-on-additional-info-change data/gisaid/additional_info.tsv "$S3_SRC/additional_info.tsv.gz" + ./bin/notify-on-flagged-metadata-change data/gisaid/flagged_metadata.txt "$S3_SRC/flagged_metadata.txt.gz" + ./bin/notify-on-location-hierarchy-addition data/gisaid/location_hierarchy.tsv source-data/location_hierarchy.tsv + fi -./bin/flag-metadata data/gisaid/metadata.tsv > data/gisaid/flagged_metadata.txt -./bin/check-locations data/gisaid/metadata.tsv \ - data/gisaid/location_hierarchy.tsv \ - gisaid_epi_isl + ./bin/upload-to-s3 ${silent:+--quiet} data/gisaid/metadata.tsv "$S3_DST/metadata.tsv.gz" + ./bin/upload-to-s3 ${silent:+--quiet} data/gisaid/additional_info.tsv "$S3_DST/additional_info.tsv.gz" + ./bin/upload-to-s3 ${silent:+--quiet} data/gisaid/flagged_metadata.txt "$S3_DST/flagged_metadata.txt.gz" + ./bin/upload-to-s3 ${silent:+--quiet} data/gisaid/sequences.fasta "$S3_DST/sequences.fasta.gz" +} -if [[ "$branch" == master ]]; then - ./bin/notify-on-metadata-change data/gisaid/metadata.tsv "$S3_SRC/metadata.tsv.gz" gisaid_epi_isl - ./bin/notify-on-additional-info-change data/gisaid/additional_info.tsv "$S3_SRC/additional_info.tsv.gz" - ./bin/notify-on-flagged-metadata-change data/gisaid/flagged_metadata.txt "$S3_SRC/flagged_metadata.txt.gz" - ./bin/notify-on-location-hierarchy-addition data/gisaid/location_hierarchy.tsv source-data/location_hierarchy.tsv -fi +print-help() { + # Print the help comments at the top of this file ($0) + local line + while read -r line; do + if [[ $line =~ ^#! ]]; then + continue + elif [[ $line =~ ^# ]]; then + line="${line/##/}" + line="${line/# /}" + echo "$line" + else + break + fi + done < "$0" +} -./bin/upload-to-s3 ${silent:+--quiet} data/gisaid/metadata.tsv "$S3_DST/metadata.tsv.gz" -./bin/upload-to-s3 ${silent:+--quiet} data/gisaid/additional_info.tsv "$S3_DST/additional_info.tsv.gz" -./bin/upload-to-s3 ${silent:+--quiet} data/gisaid/flagged_metadata.txt "$S3_DST/flagged_metadata.txt.gz" -./bin/upload-to-s3 ${silent:+--quiet} data/gisaid/sequences.fasta "$S3_DST/sequences.fasta.gz" +main "$@" diff --git a/bin/trigger b/bin/trigger index 47a46d3b..191031e4 100755 --- a/bin/trigger +++ b/bin/trigger @@ -2,7 +2,7 @@ set -euo pipefail bin="$(dirname "$0")" -event_type="${1:?An event type ("ingest" or "rebuild") is required as the first argument.}" +event_type="${1:?An event type ("fetch-and-ingest", "ingest" or "rebuild") is required as the first argument.}" shift if [[ $# -eq 0 ]]; then diff --git a/source-data/genbank_annotations.tsv b/source-data/genbank_annotations.tsv index 3f0ded89..ee33166e 100644 --- a/source-data/genbank_annotations.tsv +++ b/source-data/genbank_annotations.tsv @@ -4405,3 +4405,1532 @@ MT750089 location Winnebago County IL MT750105 location Winnebago County IL MT750122 location Winnebago County IL MT750133 location Winnebago County IL +MT758240 division Gujarat +MT758240 location Jetpur +MT758314 division Gujarat +MT758314 location Jetpur +MT758203 division Gujarat +MT758203 location Modasa +MT758197 division Gujarat +MT758197 location Rajkot +MT758202 division Gujarat +MT758202 location Rajkot +MT758213 division Gujarat +MT758213 location Rajkot +MT758215 division Gujarat +MT758215 location Rajkot +MT758346 division Gujarat +MT758346 location Rajkot +MT758375 division Gujarat +MT758375 location Rajkot +MT758402 division Gujarat +MT758402 location Surat +MT758421 division Gujarat +MT758421 location Surat +MT758436 division Gujarat +MT758436 location Surat +MT758193 division Gujarat +MT758193 location Vadodara +LR860559 strain Switzerland/110016/2020 +LR860559 region Europe +LR860559 country Switzerland +LR860560 strain Switzerland/110001/2020 +LR860560 region Europe +LR860560 country Switzerland +LR860561 strain Switzerland/110010/2020 +LR860561 region Europe +LR860561 country Switzerland +LR860562 strain Switzerland/110011/2020 +LR860562 region Europe +LR860562 country Switzerland +LR860563 strain Switzerland/110004/2020 +LR860563 region Europe +LR860563 country Switzerland +LR860564 strain Switzerland/110009/2020 +LR860564 region Europe +LR860564 country Switzerland +LR860565 strain Switzerland/110000/2020 +LR860565 region Europe +LR860565 country Switzerland +LR860566 strain Switzerland/110020/2020 +LR860566 region Europe +LR860566 country Switzerland +LR860567 strain Switzerland/110014/2020 +LR860567 region Europe +LR860567 country Switzerland +LR860568 strain Switzerland/110013/2020 +LR860568 region Europe +LR860568 country Switzerland +LR860569 strain Switzerland/110007/2020 +LR860569 region Europe +LR860569 country Switzerland +LR860570 strain Switzerland/110006/2020 +LR860570 region Europe +LR860570 country Switzerland +LR860571 strain Switzerland/110021/2020 +LR860571 region Europe +LR860571 country Switzerland +LR860572 strain Switzerland/110018/2020 +LR860572 region Europe +LR860572 country Switzerland +LR860573 strain Switzerland/110017/2020 +LR860573 region Europe +LR860573 country Switzerland +LR860574 strain Switzerland/110015/2020 +LR860574 region Europe +LR860574 country Switzerland +LR860575 strain Switzerland/110012/2020 +LR860575 region Europe +LR860575 country Switzerland +LR860576 strain Switzerland/110008/2020 +LR860576 region Europe +LR860576 country Switzerland +LR860577 strain Switzerland/110003/2020 +LR860577 region Europe +LR860577 country Switzerland +LR860578 strain Switzerland/110019/2020 +LR860578 region Europe +LR860578 country Switzerland +LR860579 strain Switzerland/110030/2020 +LR860579 region Europe 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location Tijuana +MT810762 division Baja California +MT810762 location Tijuana +MT810763 division Baja California +MT810763 location Tijuana +MT810764 division Baja California +MT810764 location Tijuana +MT810765 division Baja California +MT810765 location Tijuana +MT810766 division Baja California +MT810766 location Tijuana +MT810767 division Baja California +MT810767 location Tijuana +MT810768 division Baja California +MT810768 location Tijuana +MT810769 division Baja California +MT810769 location Tijuana +MT810770 division Baja California +MT810770 location Tijuana +MT810771 division Baja California +MT810771 location Tijuana +MT810772 division Baja California +MT810772 location Tijuana +MT810773 division Baja California +MT810773 location Tijuana +MT810774 division Baja California +MT810774 location Tijuana +MT810775 division Baja California +MT810775 location Tijuana +MT810776 division Baja California +MT810776 location Tijuana +MT810777 division Baja California +MT810777 location Tijuana +MT810778 division Baja California +MT810778 location Tijuana +MT810779 division Baja California +MT810779 location Tijuana +MT810780 division Baja California +MT810780 location Tijuana +MT810781 division Baja California +MT810781 location Tijuana +MT810782 division Baja California +MT810782 location Tijuana +MT810783 division Baja California +MT810783 location Tijuana +MT810784 division Baja California +MT810784 location Tijuana +MT810785 division Baja California +MT810785 location Tijuana +MT810786 division Baja California +MT810786 location Tijuana +MT810787 division Baja California +MT810787 location Tijuana +MT810788 division Baja California +MT810788 location Tijuana +MT810789 division Baja California +MT810789 location Tijuana +MT810582 location Imperial County +MT810709 location Imperial County +MT811192 location Imperial County +MT811198 location Imperial County +MT811199 location Imperial County +MT811200 location Imperial County +MT811202 location Imperial County +MT811203 location Imperial County +MT811215 location Imperial County +MT811216 location Imperial County +MT811219 location Imperial County +MT811223 location Imperial County +MT811227 location Imperial County +MT811230 location Imperial County +MT811231 location Imperial County +MT811233 location Imperial County +MT811234 location Imperial County +MT811235 location Imperial County +MT811238 location Imperial County +MT811243 location Imperial County +MT811244 location Imperial County +MT811246 location Imperial County +MT811247 location Imperial County +MT811249 location Imperial County +MT811252 location Imperial County +MT811253 location Imperial County +MT811259 location Imperial County +MT811260 location Imperial County +MT811262 location Imperial County +MT811263 location Imperial County +MT811264 location Imperial County +MT811265 location Imperial County +MT811266 location Imperial County +MT811268 location Imperial County +MT811275 location Imperial County +MT811276 location Imperial County +MT811277 location Imperial County +MT811278 location Imperial County +MT811279 location Imperial County +MT811280 location Imperial County +MT811281 location Imperial County +MT811282 location Imperial County +MT811283 location Imperial County +MT811286 location Imperial County +MT811287 location Imperial County +MT811289 location Imperial County +MT811290 location Imperial County +MT811291 location Imperial County +MT811294 location Imperial County +MT811295 location Imperial County +MT811296 location Imperial County +MT811297 location Imperial County +MT811298 location Imperial County +MT811299 location Imperial County +MT811300 location Imperial County +MT811301 location Imperial County +MT811302 location Imperial County +MT811306 location Imperial County +MT811307 location Imperial County +MT811308 location Imperial County +MT811309 location Imperial County +MT811311 location Imperial County +MT811338 location Imperial County +MT811339 location Imperial County +MT811340 location Imperial County +MT811341 location Imperial County +MT811342 location Imperial County +MT811344 location Imperial County +MT811345 location Imperial County +MT811346 location Imperial County +MT811347 location Imperial County +MT811348 location Imperial County +MT811349 location Imperial County +MT811350 location Imperial County +MT811351 location Imperial County +MT811352 location Imperial County +MT811353 location Imperial County +MT811355 location Imperial County +MT811356 location Imperial County +MT811358 location Imperial County +MT811359 location Imperial County +MT811364 location Imperial County +MT811368 location Imperial County +MT811381 location Imperial County +MT811396 location Imperial County +MT811398 location Imperial County +MT811401 location Imperial County +MT811404 location Imperial County +MT811406 location Imperial County +MT811407 location Imperial County +MT811408 location Imperial County +MT811410 location Imperial County +MT811412 location Imperial County +MT811413 location Imperial County +MT811414 location Imperial County +MT811415 location Imperial County +MT811416 location Imperial County +MT811418 location Imperial County +MT811420 location Imperial County +MT811421 location Imperial County +MT811422 location Imperial County +MT811423 location Imperial County +MT811424 location Imperial County +MT811426 location Imperial County +MT811427 location Imperial County +MT811428 location Imperial County +MT811440 location Imperial County +MT811444 location Imperial County +MT811457 location Imperial County +MT811458 location Imperial County +MT811459 location Imperial County +MT811462 location Imperial County +MT811470 location Imperial County +MT811471 location Imperial County +MT811473 location Imperial County +MT811474 location Imperial County +MT811477 location Imperial County +MT811479 location Imperial County +MT811481 location Imperial County +MT811482 location Imperial County +MT821542 location Franklin County WA +MT821567 location Franklin County WA +MT821573 location Franklin County WA +MT821630 location Franklin County WA +MT821786 location Franklin County WA +MT831207 location Franklin County WA +MT831237 location Franklin County WA +MT831294 location Franklin County WA +MT831359 location Franklin County WA +MT831416 location Franklin County WA +MT831423 location Franklin County WA +MT831426 location Franklin County WA +MT831440 location Franklin County WA +MT831443 location Franklin County WA +MT831459 location Franklin County WA +MT831583 location Franklin County WA diff --git a/source-data/gisaid_annotations.tsv b/source-data/gisaid_annotations.tsv index 577ead59..3eafcee2 100644 --- a/source-data/gisaid_annotations.tsv +++ b/source-data/gisaid_annotations.tsv @@ -55,6 +55,395 @@ # USA/UPHL-05/2020 and USA/UPHL-06/2020 have Caribean cruise exposure - Jamaica & FLorida - duncan # USA/CA-UCSF-UC32/2020 close contact of UC34 # USA/CA-UCSF-UC33/2020 works at airport, community acquired +# Canada/AB-Z0001/2020 EPI_ISL_504185 additional_location_info: Wastewater +# Korea/KCDC2171/2020 EPI_ISL_506965 additional_location_info: Imported +# Korea/KCDC2172/2020 EPI_ISL_506966 additional_location_info: Imported +# Korea/KCDC2173/2020 EPI_ISL_506967 additional_location_info: Imported +# Korea/KCDC2174/2020 EPI_ISL_506968 additional_location_info: Imported +# Korea/KCDC2175/2020 EPI_ISL_506969 additional_location_info: Imported +# Korea/KCDC2176/2020 EPI_ISL_506970 additional_location_info: Imported +# Korea/KCDC2177/2020 EPI_ISL_506971 additional_location_info: Imported +# Korea/KCDC2178/2020 EPI_ISL_506972 additional_location_info: Imported +# Korea/KCDC2179/2020 EPI_ISL_506973 additional_location_info: Imported +# Korea/KCDC2180/2020 EPI_ISL_506974 additional_location_info: Imported +# Korea/KCDC2182/2020 EPI_ISL_506976 additional_location_info: Imported +# Korea/KCDC2183/2020 EPI_ISL_506977 additional_location_info: Imported +# Korea/KCDC2184/2020 EPI_ISL_506978 additional_location_info: Imported +# Korea/KCDC2185/2020 EPI_ISL_506979 additional_location_info: Imported +# Korea/KCDC2186/2020 EPI_ISL_506980 additional_location_info: Imported +# Korea/KCDC2187/2020 EPI_ISL_506981 additional_location_info: Imported +# Korea/KCDC2188/2020 EPI_ISL_506982 additional_location_info: Imported +# Korea/KCDC2189/2020 EPI_ISL_506983 additional_location_info: Imported +# Korea/KCDC2190/2020 EPI_ISL_506984 additional_location_info: Imported +# Korea/KCDC2194/2020 EPI_ISL_506988 additional_location_info: Imported +# Korea/KCDC2195/2020 EPI_ISL_506989 additional_location_info: Imported +# Korea/KCDC2196/2020 EPI_ISL_506990 additional_location_info: Imported +# Korea/KCDC2198/2020 EPI_ISL_506992 additional_location_info: Imported +# Korea/KCDC2199/2020 EPI_ISL_506993 additional_location_info: Imported +# Korea/KCDC2200/2020 EPI_ISL_506994 additional_location_info: Imported +# Korea/KCDC2202/2020 EPI_ISL_506995 additional_location_info: Imported +# India/AR1/2020 EPI_ISL_508156 additional_host_info: Patient infected while traveling +# India/AR10/2020 EPI_ISL_508157 additional_host_info: Patient infected while traveling +# India/AR11/2020 EPI_ISL_508158 additional_host_info: Patient infected while traveling +# India/AR12/2020 EPI_ISL_508159 additional_host_info: Patient infected while traveling +# India/AR13/2020 EPI_ISL_508160 additional_host_info: Patient infected while traveling +# India/AR14/2020 EPI_ISL_508161 additional_host_info: Patient infected while traveling +# India/AR15/2020 EPI_ISL_508162 additional_host_info: Patient infected while traveling +# India/AR16/2020 EPI_ISL_508163 additional_host_info: Patient infected while traveling +# India/AR17/2020 EPI_ISL_508164 additional_host_info: Patient infected while traveling +# India/AR18/2020 EPI_ISL_508165 additional_host_info: Patient infected while traveling +# India/AR19/2020 EPI_ISL_508166 additional_host_info: Patient infected while traveling +# India/AR2/2020 EPI_ISL_508167 additional_host_info: Patient infected while traveling +# India/AR20/2020 EPI_ISL_508168 additional_host_info: Patient infected while traveling +# India/AR21/2020 EPI_ISL_508169 additional_host_info: Patient infected while traveling +# India/AR22/2020 EPI_ISL_508170 additional_host_info: Patient infected while traveling +# India/AR23/2020 EPI_ISL_508171 additional_host_info: Patient infected while traveling +# India/AR24/2020 EPI_ISL_508172 additional_host_info: Patient infected while traveling +# India/AR25/2020 EPI_ISL_508173 additional_host_info: Patient infected while traveling +# India/AR27/2020 EPI_ISL_508174 additional_host_info: Patient infected while traveling +# India/AR28/2020 EPI_ISL_508175 additional_host_info: Patient infected while traveling +# India/AR29/2020 EPI_ISL_508176 additional_host_info: Patient infected while traveling +# India/AR3/2020 EPI_ISL_508177 additional_host_info: Patient infected while traveling +# India/AR30/2020 EPI_ISL_508178 additional_host_info: Patient infected while traveling +# India/AR31/2020 EPI_ISL_508179 additional_host_info: Patient infected while traveling +# India/AR32/2020 EPI_ISL_508180 additional_host_info: Patient infected while traveling +# India/AR33/2020 EPI_ISL_508181 additional_host_info: Patient infected while traveling +# India/AR34/2020 EPI_ISL_508182 additional_host_info: Patient infected while traveling +# India/AR36/2020 EPI_ISL_508183 additional_host_info: Patient infected while traveling +# India/AR4/2020 EPI_ISL_508184 additional_host_info: Patient infected while traveling +# India/AR41/2020 EPI_ISL_508185 additional_host_info: Patient infected while traveling +# India/AR42/2020 EPI_ISL_508186 additional_host_info: Patient infected while traveling +# India/AR43/2020 EPI_ISL_508187 additional_host_info: Patient infected while traveling +# India/AR44/2020 EPI_ISL_508188 additional_host_info: Patient infected while traveling +# India/AR45/2020 EPI_ISL_508189 additional_host_info: Patient infected while traveling +# India/AR46/2020 EPI_ISL_508190 additional_host_info: Patient infected while traveling +# India/AR5/2020 EPI_ISL_508191 additional_host_info: Patient infected while traveling +# India/AR53/2020 EPI_ISL_508192 additional_host_info: Patient infected while traveling +# India/AR54/2020 EPI_ISL_508193 additional_host_info: Patient infected while traveling +# India/AR58/2020 EPI_ISL_508194 additional_host_info: Patient infected while traveling +# India/AR59/2020 EPI_ISL_508195 additional_host_info: Patient infected while traveling +# India/AR6/2020 EPI_ISL_508196 additional_host_info: Patient infected while traveling +# India/AR60/2020 EPI_ISL_508197 additional_host_info: Patient infected while traveling +# India/AR61/2020 EPI_ISL_508198 additional_host_info: Patient infected while traveling +# India/AR62/2020 EPI_ISL_508199 additional_host_info: Patient infected while traveling +# India/AR63/2020 EPI_ISL_508200 additional_host_info: Patient infected while traveling +# India/AR65/2020 EPI_ISL_508201 additional_host_info: Patient infected while traveling +# India/AR66/2020 EPI_ISL_508202 additional_host_info: Patient infected while traveling +# India/AR67/2020 EPI_ISL_508203 additional_host_info: Patient infected while traveling +# India/AR7/2020 EPI_ISL_508204 additional_host_info: Patient infected while traveling +# India/AR8/2020 EPI_ISL_508205 additional_host_info: Patient infected while traveling +# India/AR9/2020 EPI_ISL_508206 additional_host_info: Patient infected while traveling +# India/GA11/2020 EPI_ISL_508207 additional_host_info: Patient infected while traveling +# India/GA12/2020 EPI_ISL_508208 additional_host_info: Patient infected while traveling +# India/GA13/2020 EPI_ISL_508209 additional_host_info: Patient infected while traveling +# India/GA14/2020 EPI_ISL_508210 additional_host_info: Patient infected while traveling +# India/GA15/2020 EPI_ISL_508211 additional_host_info: Patient infected while traveling +# India/GA16/2020 EPI_ISL_508212 additional_host_info: Patient infected while traveling +# India/GA17/2020 EPI_ISL_508213 additional_host_info: Patient infected while traveling +# India/GA19/2020 EPI_ISL_508214 additional_host_info: Patient infected while traveling +# India/GA2/2020 EPI_ISL_508215 additional_host_info: Patient infected while traveling +# India/GA20/2020 EPI_ISL_508216 additional_host_info: Patient infected while traveling +# India/GA21/2020 EPI_ISL_508217 additional_host_info: Patient infected while traveling +# India/GA22/2020 EPI_ISL_508218 additional_host_info: Patient infected while traveling +# India/GA24/2020 EPI_ISL_508219 additional_host_info: Patient infected while traveling +# India/GA25/2020 EPI_ISL_508220 additional_host_info: Patient infected while traveling +# India/GA26/2020 EPI_ISL_508221 additional_host_info: Patient infected while traveling +# India/GA27/2020 EPI_ISL_508222 additional_host_info: Patient infected while traveling +# India/GA28/2020 EPI_ISL_508223 additional_host_info: Patient infected while traveling +# India/GA29/2020 EPI_ISL_508224 additional_host_info: Patient infected while traveling +# India/GA31/2020 EPI_ISL_508225 additional_host_info: Patient infected while traveling +# India/GA32/2020 EPI_ISL_508226 additional_host_info: Patient infected while traveling +# India/GA33/2020 EPI_ISL_508227 additional_host_info: Patient infected while traveling +# India/GA34/2020 EPI_ISL_508228 additional_host_info: Patient infected while traveling +# India/GA35/2020 EPI_ISL_508229 additional_host_info: Patient infected while traveling +# India/GA36/2020 EPI_ISL_508230 additional_host_info: Patient infected while traveling +# India/GA37/2020 EPI_ISL_508231 additional_host_info: Patient infected while traveling +# India/GA38/2020 EPI_ISL_508232 additional_host_info: Patient infected while traveling +# India/GA39/2020 EPI_ISL_508233 additional_host_info: Patient infected while traveling +# India/GA4/2020 EPI_ISL_508234 additional_host_info: Patient infected while traveling +# India/GA40/2020 EPI_ISL_508235 additional_host_info: Patient infected while traveling +# India/GA41/2020 EPI_ISL_508236 additional_host_info: Patient infected while traveling +# India/GA42/2020 EPI_ISL_508237 additional_host_info: Patient infected while traveling +# India/GA43/2020 EPI_ISL_508238 additional_host_info: Patient infected while traveling +# India/GA45/2020 EPI_ISL_508239 additional_host_info: Patient infected while traveling +# India/GA46/2020 EPI_ISL_508240 additional_host_info: Patient infected while traveling +# India/GA47/2020 EPI_ISL_508241 additional_host_info: Patient infected while traveling +# India/GA48/2020 EPI_ISL_508242 additional_host_info: Patient infected while traveling +# India/GA49/2020 EPI_ISL_508243 additional_host_info: Patient infected while traveling +# India/GA5/2020 EPI_ISL_508244 additional_host_info: Patient infected while traveling +# India/GA50/2020 EPI_ISL_508245 additional_host_info: Patient infected while traveling +# India/GA51/2020 EPI_ISL_508246 additional_host_info: Patient infected while traveling +# India/GA52/2020 EPI_ISL_508247 additional_host_info: Patient infected while traveling +# India/GA53/2020 EPI_ISL_508248 additional_host_info: Patient infected while traveling +# India/GA54/2020 EPI_ISL_508249 additional_host_info: Patient infected while traveling +# India/GA55/2020 EPI_ISL_508250 additional_host_info: Patient infected while traveling +# India/GA56/2020 EPI_ISL_508251 additional_host_info: Patient infected while traveling +# India/GA57/2020 EPI_ISL_508252 additional_host_info: Patient infected while traveling +# India/GA59/2020 EPI_ISL_508253 additional_host_info: Patient infected while traveling +# India/GA6/2020 EPI_ISL_508254 additional_host_info: Patient infected while traveling +# India/GA60/2020 EPI_ISL_508255 additional_host_info: Patient infected while traveling +# India/GA61/2020 EPI_ISL_508256 additional_host_info: Patient infected while traveling +# India/GA62/2020 EPI_ISL_508257 additional_host_info: Patient infected while traveling +# India/GA63/2020 EPI_ISL_508258 additional_host_info: Patient infected while traveling +# India/GA65/2020 EPI_ISL_508259 additional_host_info: Patient infected while traveling +# India/GA66/2020 EPI_ISL_508260 additional_host_info: Patient infected while traveling +# India/GA67/2020 EPI_ISL_508261 additional_host_info: Patient infected while traveling +# India/GA68/2020 EPI_ISL_508262 additional_host_info: Patient infected while traveling +# India/GA69/2020 EPI_ISL_508263 additional_host_info: Patient infected while traveling +# India/GA7/2020 EPI_ISL_508264 additional_host_info: Patient infected while traveling +# India/GA70/2020 EPI_ISL_508265 additional_host_info: Patient infected while traveling +# India/GA71/2020 EPI_ISL_508266 additional_host_info: Patient infected while traveling +# India/GA73/2020 EPI_ISL_508267 additional_host_info: Patient infected while traveling +# India/GA74/2020 EPI_ISL_508268 additional_host_info: Patient infected while traveling +# India/GA75/2020 EPI_ISL_508269 additional_host_info: Patient infected while traveling +# India/GA76/2020 EPI_ISL_508270 additional_host_info: Patient infected while traveling +# India/GA77/2020 EPI_ISL_508271 additional_host_info: Patient infected while traveling +# India/GA78/2020 EPI_ISL_508272 additional_host_info: Patient infected while traveling +# India/GA79/2020 EPI_ISL_508273 additional_host_info: Patient infected while traveling +# India/GA8/2020 EPI_ISL_508274 additional_host_info: Patient infected while traveling +# India/GA80/2020 EPI_ISL_508275 additional_host_info: Patient infected while traveling +# India/GA81/2020 EPI_ISL_508276 additional_host_info: Patient infected while traveling +# India/GA82/2020 EPI_ISL_508277 additional_host_info: Patient infected while traveling +# India/GA83/2020 EPI_ISL_508278 additional_host_info: Patient infected while traveling +# India/GA84/2020 EPI_ISL_508279 additional_host_info: Patient infected while traveling +# India/GA85/2020 EPI_ISL_508280 additional_host_info: Patient infected while traveling +# India/GA86/2020 EPI_ISL_508281 additional_host_info: Patient infected while traveling +# India/GA87/2020 EPI_ISL_508282 additional_host_info: Patient infected while traveling +# India/GA88/2020 EPI_ISL_508283 additional_host_info: Patient infected while traveling +# India/GA9/2020 EPI_ISL_508284 additional_host_info: Patient infected while traveling +# India/GA93/2020 EPI_ISL_508285 additional_host_info: Patient infected while traveling +# India/GA98/2020 EPI_ISL_508286 additional_host_info: Patient infected while traveling +# India/IB1/2020 EPI_ISL_508287 additional_host_info: Patient infected while traveling +# India/IB10/2020 EPI_ISL_508288 additional_host_info: Patient infected while traveling +# India/IB11/2020 EPI_ISL_508289 additional_host_info: Patient infected while traveling +# India/IB12/2020 EPI_ISL_508290 additional_host_info: Patient infected while traveling +# India/IB13/2020 EPI_ISL_508291 additional_host_info: Patient infected while traveling +# India/IB14/2020 EPI_ISL_508292 additional_host_info: Patient infected while traveling +# India/IB15/2020 EPI_ISL_508293 additional_host_info: Patient infected while traveling +# India/IB16/2020 EPI_ISL_508294 additional_host_info: Patient infected while traveling +# India/IB17/2020 EPI_ISL_508295 additional_host_info: Patient infected while traveling +# India/IB18/2020 EPI_ISL_508296 additional_host_info: Patient infected while traveling +# India/IB19/2020 EPI_ISL_508297 additional_host_info: Patient infected while traveling +# India/IB2/2020 EPI_ISL_508298 additional_host_info: Patient infected while traveling +# India/IB21/2020 EPI_ISL_508299 additional_host_info: Patient infected while traveling +# India/IB22/2020 EPI_ISL_508300 additional_host_info: Patient infected while traveling +# India/IB23/2020 EPI_ISL_508301 additional_host_info: Patient infected while traveling +# India/IB24/2020 EPI_ISL_508302 additional_host_info: Patient infected while traveling +# India/IB25/2020 EPI_ISL_508303 additional_host_info: Patient infected while traveling +# India/IB26/2020 EPI_ISL_508304 additional_host_info: Patient infected while traveling +# India/IB27/2020 EPI_ISL_508305 additional_host_info: Patient infected while traveling +# India/IB28/2020 EPI_ISL_508306 additional_host_info: Patient infected while traveling +# India/IB29/2020 EPI_ISL_508307 additional_host_info: Patient infected while traveling +# India/IB3/2020 EPI_ISL_508308 additional_host_info: Patient infected while traveling +# India/IB30/2020 EPI_ISL_508309 additional_host_info: Patient infected while traveling +# India/IB31/2020 EPI_ISL_508310 additional_host_info: Patient infected while traveling +# India/IB32/2020 EPI_ISL_508311 additional_host_info: Patient infected while traveling +# India/IB33/2020 EPI_ISL_508312 additional_host_info: Patient infected while traveling +# India/IB34/2020 EPI_ISL_508313 additional_host_info: Patient infected while traveling +# India/IB35/2020 EPI_ISL_508314 additional_host_info: Patient infected while traveling +# India/IB36/2020 EPI_ISL_508315 additional_host_info: Patient infected while traveling +# India/IB38/2020 EPI_ISL_508316 additional_host_info: Patient infected while traveling +# India/IB39/2020 EPI_ISL_508317 additional_host_info: Patient infected while traveling +# India/IB4/2020 EPI_ISL_508318 additional_host_info: Patient infected while traveling +# India/IB40/2020 EPI_ISL_508319 additional_host_info: Patient infected while traveling +# India/IB41/2020 EPI_ISL_508320 additional_host_info: Patient infected while traveling +# India/IB42/2020 EPI_ISL_508321 additional_host_info: Patient infected while traveling +# India/IB43/2020 EPI_ISL_508322 additional_host_info: Patient infected while traveling +# India/IB44/2020 EPI_ISL_508323 additional_host_info: Patient infected while traveling +# India/IB46/2020 EPI_ISL_508324 additional_host_info: Patient infected while traveling +# India/IB47/2020 EPI_ISL_508325 additional_host_info: Patient infected while traveling +# India/IB48/2020 EPI_ISL_508326 additional_host_info: Patient infected while traveling +# India/IB5/2020 EPI_ISL_508327 additional_host_info: Patient infected while traveling +# India/IB50/2020 EPI_ISL_508328 additional_host_info: Patient infected while traveling +# India/IB51/2020 EPI_ISL_508329 additional_host_info: Patient infected while traveling +# India/IB53/2020 EPI_ISL_508330 additional_host_info: Patient infected while traveling +# India/IB54/2020 EPI_ISL_508331 additional_host_info: Patient infected while traveling +# India/IB58/2020 EPI_ISL_508332 additional_host_info: Patient infected while traveling +# India/IB6/2020 EPI_ISL_508333 additional_host_info: Patient infected while traveling +# India/IB62/2020 EPI_ISL_508334 additional_host_info: Patient infected while traveling +# India/IB7/2020 EPI_ISL_508335 additional_host_info: Patient infected while traveling +# India/IB8/2020 EPI_ISL_508336 additional_host_info: Patient infected while traveling +# India/IB9/2020 EPI_ISL_508337 additional_host_info: Patient infected while traveling +# India/IK1/2020 EPI_ISL_508338 additional_host_info: Patient infected while traveling +# India/IK10/2020 EPI_ISL_508339 additional_host_info: Patient infected while traveling +# India/IK11/2020 EPI_ISL_508340 additional_host_info: Patient infected while traveling +# India/IK12/2020 EPI_ISL_508341 additional_host_info: Patient infected while traveling +# India/IK13/2020 EPI_ISL_508342 additional_host_info: Patient infected while traveling +# India/IK14/2020 EPI_ISL_508343 additional_host_info: Patient infected while traveling +# India/IK15/2020 EPI_ISL_508344 additional_host_info: Patient infected while traveling +# India/IK16/2020 EPI_ISL_508345 additional_host_info: Patient infected while traveling +# India/IK17/2020 EPI_ISL_508346 additional_host_info: Patient infected while traveling +# India/IK18/2020 EPI_ISL_508347 additional_host_info: Patient infected while traveling +# India/IK19/2020 EPI_ISL_508348 additional_host_info: Patient infected while traveling +# India/IK2/2020 EPI_ISL_508349 additional_host_info: Patient infected while traveling +# India/IK20/2020 EPI_ISL_508350 additional_host_info: Patient infected while traveling +# India/IK21/2020 EPI_ISL_508351 additional_host_info: Patient infected while traveling +# India/IK22/2020 EPI_ISL_508352 additional_host_info: Patient infected while traveling +# India/IK23/2020 EPI_ISL_508353 additional_host_info: Patient infected while traveling +# India/IK24/2020 EPI_ISL_508354 additional_host_info: Patient infected while traveling +# India/IK25/2020 EPI_ISL_508355 additional_host_info: Patient infected while traveling +# India/IK26/2020 EPI_ISL_508356 additional_host_info: Patient infected while traveling +# India/IK27/2020 EPI_ISL_508357 additional_host_info: Patient infected while traveling +# India/IK28/2020 EPI_ISL_508358 additional_host_info: Patient infected while traveling +# India/IK29/2020 EPI_ISL_508359 additional_host_info: Patient infected while traveling +# India/IK30/2020 EPI_ISL_508360 additional_host_info: Patient infected while traveling +# India/IK31/2020 EPI_ISL_508361 additional_host_info: Patient infected while traveling +# India/IK32/2020 EPI_ISL_508362 additional_host_info: Patient infected while traveling +# India/IK33/2020 EPI_ISL_508363 additional_host_info: Patient infected while traveling +# India/IK35/2020 EPI_ISL_508364 additional_host_info: Patient infected while traveling +# India/IK36/2020 EPI_ISL_508365 additional_host_info: Patient infected while traveling +# India/IK38/2020 EPI_ISL_508366 additional_host_info: Patient infected while traveling +# India/IK39/2020 EPI_ISL_508367 additional_host_info: Patient infected while traveling +# India/IK4/2020 EPI_ISL_508368 additional_host_info: Patient infected while traveling +# India/IK41/2020 EPI_ISL_508369 additional_host_info: Patient infected while traveling +# India/IK42/2020 EPI_ISL_508370 additional_host_info: Patient infected while traveling +# India/IK44/2020 EPI_ISL_508371 additional_host_info: Patient infected while traveling +# India/IK45/2020 EPI_ISL_508372 additional_host_info: Patient infected while traveling +# India/IK46/2020 EPI_ISL_508373 additional_host_info: Patient infected while traveling +# India/IK47/2020 EPI_ISL_508374 additional_host_info: Patient infected while traveling +# India/IK48/2020 EPI_ISL_508375 additional_host_info: Patient infected while traveling +# India/IK5/2020 EPI_ISL_508376 additional_host_info: Patient infected while traveling +# India/IK50/2020 EPI_ISL_508377 additional_host_info: Patient infected while traveling +# India/IK51/2020 EPI_ISL_508378 additional_host_info: Patient infected while traveling +# India/IK53/2020 EPI_ISL_508379 additional_host_info: Patient infected while traveling +# India/IK54/2020 EPI_ISL_508380 additional_host_info: Patient infected while traveling +# India/IK55/2020 EPI_ISL_508381 additional_host_info: Patient infected while traveling +# India/IK56/2020 EPI_ISL_508382 additional_host_info: Patient infected while traveling +# India/IK57/2020 EPI_ISL_508383 additional_host_info: Patient infected while traveling +# India/IK58/2020 EPI_ISL_508384 additional_host_info: Patient infected while traveling +# India/IK6/2020 EPI_ISL_508385 additional_host_info: Patient infected while traveling +# India/IK60/2020 EPI_ISL_508386 additional_host_info: Patient infected while traveling +# India/IK63/2020 EPI_ISL_508387 additional_host_info: Patient infected while traveling +# India/IK64/2020 EPI_ISL_508388 additional_host_info: Patient infected while traveling +# India/IK65/2020 EPI_ISL_508389 additional_host_info: Patient infected while traveling +# India/IK66/2020 EPI_ISL_508390 additional_host_info: Patient infected while traveling +# India/IK67/2020 EPI_ISL_508391 additional_host_info: Patient infected while traveling +# India/IK68/2020 EPI_ISL_508392 additional_host_info: Patient infected while traveling +# India/IK69/2020 EPI_ISL_508393 additional_host_info: Patient infected while traveling +# India/IK7/2020 EPI_ISL_508394 additional_host_info: Patient infected while traveling +# India/IK71/2020 EPI_ISL_508395 additional_host_info: Patient infected while traveling +# India/IK72/2020 EPI_ISL_508396 additional_host_info: Patient infected while traveling +# India/IK73/2020 EPI_ISL_508397 additional_host_info: Patient infected while traveling +# India/IK75/2020 EPI_ISL_508398 additional_host_info: Patient infected while traveling +# India/IK77/2020 EPI_ISL_508399 additional_host_info: Patient infected while traveling +# India/IK79/2020 EPI_ISL_508400 additional_host_info: Patient infected while traveling +# India/IK80/2020 EPI_ISL_508401 additional_host_info: Patient infected while traveling +# India/IK82/2020 EPI_ISL_508402 additional_host_info: Patient infected while traveling +# India/IK83/2020 EPI_ISL_508403 additional_host_info: Patient infected while traveling +# India/IK85/2020 EPI_ISL_508404 additional_host_info: Patient infected while traveling +# India/IK86/2020 EPI_ISL_508405 additional_host_info: Patient infected while traveling +# India/IK88/2020 EPI_ISL_508406 additional_host_info: Patient infected while traveling +# India/IK9/2020 EPI_ISL_508407 additional_host_info: Patient infected while traveling +# India/IK90/2020 EPI_ISL_508408 additional_host_info: Patient infected while traveling +# India/IK91/2020 EPI_ISL_508409 additional_host_info: Patient infected while traveling +# India/IK92/2020 EPI_ISL_508410 additional_host_info: Patient infected while traveling +# India/IK93/2020 EPI_ISL_508411 additional_host_info: Patient infected while traveling +# India/IK96/2020 EPI_ISL_508412 additional_host_info: Patient infected while traveling +# India/IK97/2020 EPI_ISL_508413 additional_host_info: Patient infected while traveling +# India/IK99/2020 EPI_ISL_508414 additional_host_info: Patient infected while traveling +# India/MN1/2020 EPI_ISL_508415 additional_host_info: Patient infected while traveling +# India/MN10/2020 EPI_ISL_508416 additional_host_info: Patient infected while traveling +# India/MN11/2020 EPI_ISL_508417 additional_host_info: Patient infected while traveling +# India/MN26/2020 EPI_ISL_508418 additional_host_info: Patient infected while traveling +# India/MN32/2020 EPI_ISL_508419 additional_host_info: Patient infected while traveling +# India/MN4/2020 EPI_ISL_508420 additional_host_info: Patient infected while traveling +# India/MN5/2020 EPI_ISL_508421 additional_host_info: Patient infected while traveling +# India/MN8/2020 EPI_ISL_508422 additional_host_info: Patient infected while traveling +# India/MW11/2020 EPI_ISL_508423 additional_host_info: Patient infected while traveling +# India/MW12/2020 EPI_ISL_508424 additional_host_info: Patient infected while traveling +# India/MW17/2020 EPI_ISL_508425 additional_host_info: Patient infected while traveling +# India/MW18/2020 EPI_ISL_508426 additional_host_info: Patient infected while traveling +# India/MW20/2020 EPI_ISL_508427 additional_host_info: Patient infected while traveling +# India/MW24/2020 EPI_ISL_508428 additional_host_info: Patient infected while traveling +# India/MW25/2020 EPI_ISL_508429 additional_host_info: Patient infected while traveling +# India/MW26/2020 EPI_ISL_508430 additional_host_info: Patient infected while traveling +# India/MW28/2020 EPI_ISL_508431 additional_host_info: Patient infected while traveling +# India/MW29/2020 EPI_ISL_508432 additional_host_info: Patient infected while traveling +# India/MW3/2020 EPI_ISL_508433 additional_host_info: Patient infected while traveling +# India/MW30/2020 EPI_ISL_508434 additional_host_info: Patient infected while traveling +# India/MW32/2020 EPI_ISL_508435 additional_host_info: Patient infected while traveling +# India/MW33/2020 EPI_ISL_508436 additional_host_info: Patient infected while traveling +# India/MW34/2020 EPI_ISL_508437 additional_host_info: Patient infected while traveling +# India/MW38/2020 EPI_ISL_508438 additional_host_info: Patient infected while traveling +# India/MW5/2020 EPI_ISL_508439 additional_host_info: Patient infected while traveling +# India/MW8/2020 EPI_ISL_508440 additional_host_info: Patient infected while traveling +# India/S100/2020 EPI_ISL_508441 additional_host_info: Patient infected while traveling +# India/S101/2020 EPI_ISL_508442 additional_host_info: Patient infected while traveling +# India/S102/2020 EPI_ISL_508443 additional_host_info: Patient infected while traveling +# India/S35/2020 EPI_ISL_508444 additional_host_info: Patient infected while traveling +# India/S36/2020 EPI_ISL_508445 additional_host_info: Patient infected while traveling +# India/S38/2020 EPI_ISL_508446 additional_host_info: Patient infected while traveling +# India/S39/2020 EPI_ISL_508447 additional_host_info: Patient infected while traveling +# India/S40/2020 EPI_ISL_508448 additional_host_info: Patient infected while traveling +# India/S41/2020 EPI_ISL_508449 additional_host_info: Patient infected while traveling +# India/S47/2020 EPI_ISL_508450 additional_host_info: Patient infected while traveling +# India/S54/2020 EPI_ISL_508451 additional_host_info: Patient infected while traveling +# India/S57/2020 EPI_ISL_508452 additional_host_info: Patient infected while traveling +# India/S63/2020 EPI_ISL_508453 additional_host_info: Patient infected while traveling +# India/S64/2020 EPI_ISL_508454 additional_host_info: Patient infected while traveling +# India/S65/2020 EPI_ISL_508455 additional_host_info: Patient infected while traveling +# India/S66/2020 EPI_ISL_508456 additional_host_info: Patient infected while traveling +# India/S67/2020 EPI_ISL_508457 additional_host_info: Patient infected while traveling +# India/S68/2020 EPI_ISL_508458 additional_host_info: Patient infected while traveling +# India/S69/2020 EPI_ISL_508459 additional_host_info: Patient infected while traveling +# India/S70/2020 EPI_ISL_508460 additional_host_info: Patient infected while traveling +# India/S71/2020 EPI_ISL_508461 additional_host_info: Patient infected while traveling +# India/S72/2020 EPI_ISL_508462 additional_host_info: Patient infected while traveling +# India/S73/2020 EPI_ISL_508463 additional_host_info: Patient infected while traveling +# India/S74/2020 EPI_ISL_508464 additional_host_info: Patient infected while traveling +# India/S75/2020 EPI_ISL_508465 additional_host_info: Patient infected while traveling +# India/S76/2020 EPI_ISL_508466 additional_host_info: Patient infected while traveling +# India/S77/2020 EPI_ISL_508467 additional_host_info: Patient infected while traveling +# India/S78/2020 EPI_ISL_508468 additional_host_info: Patient infected while traveling +# India/S79/2020 EPI_ISL_508469 additional_host_info: Patient infected while traveling +# India/S80/2020 EPI_ISL_508470 additional_host_info: Patient infected while traveling +# India/S81/2020 EPI_ISL_508471 additional_host_info: Patient infected while traveling +# India/S82/2020 EPI_ISL_508472 additional_host_info: Patient infected while traveling +# India/S84/2020 EPI_ISL_508473 additional_host_info: Patient infected while traveling +# India/S85/2020 EPI_ISL_508474 additional_host_info: Patient infected while traveling +# India/S86/2020 EPI_ISL_508475 additional_host_info: Patient infected while traveling +# India/S87/2020 EPI_ISL_508476 additional_host_info: Patient infected while traveling +# India/S88/2020 EPI_ISL_508477 additional_host_info: Patient infected while traveling +# India/S89/2020 EPI_ISL_508478 additional_host_info: Patient infected while traveling +# India/S90/2020 EPI_ISL_508479 additional_host_info: Patient infected while traveling +# India/S91/2020 EPI_ISL_508480 additional_host_info: Patient infected while traveling +# India/S92/2020 EPI_ISL_508481 additional_host_info: Patient infected while traveling +# India/S93/2020 EPI_ISL_508482 additional_host_info: Patient infected while traveling +# India/S94/2020 EPI_ISL_508483 additional_host_info: Patient infected while traveling +# India/S95/2020 EPI_ISL_508484 additional_host_info: Patient infected while traveling +# India/S96/2020 EPI_ISL_508485 additional_host_info: Patient infected while traveling +# India/S97/2020 EPI_ISL_508486 additional_host_info: Patient infected while traveling +# India/S98/2020 EPI_ISL_508487 additional_host_info: Patient infected while traveling +# India/S99/2020 EPI_ISL_508488 additional_host_info: Patient infected while traveling +# India/TF1/2020 EPI_ISL_508489 additional_host_info: Patient infected while traveling +# India/TF10/2020 EPI_ISL_508490 additional_host_info: Patient infected while traveling +# India/TF12/2020 EPI_ISL_508491 additional_host_info: Patient infected while traveling +# India/TF13/2020 EPI_ISL_508492 additional_host_info: Patient infected while traveling +# India/TF14/2020 EPI_ISL_508493 additional_host_info: Patient infected while traveling +# India/TF15/2020 EPI_ISL_508494 additional_host_info: Patient infected while traveling +# India/TF17/2020 EPI_ISL_508495 additional_host_info: Patient infected while traveling +# India/TF2/2020 EPI_ISL_508496 additional_host_info: Patient infected while traveling +# India/TF20/2020 EPI_ISL_508497 additional_host_info: Patient infected while traveling +# India/TF24/2020 EPI_ISL_508498 additional_host_info: Patient infected while traveling +# India/TF25/2020 EPI_ISL_508499 additional_host_info: Patient infected while traveling +# India/TF26/2020 EPI_ISL_508500 additional_host_info: Patient infected while traveling +# India/TF27/2020 EPI_ISL_508501 additional_host_info: Patient infected while traveling +# India/TF3/2020 EPI_ISL_508502 additional_host_info: Patient infected while traveling +# India/TF30/2020 EPI_ISL_508503 additional_host_info: Patient infected while traveling +# India/TF38/2020 EPI_ISL_508504 additional_host_info: Patient infected while traveling +# India/TF4/2020 EPI_ISL_508505 additional_host_info: Patient infected while traveling +# India/TF41/2020 EPI_ISL_508506 additional_host_info: Patient infected while traveling +# India/TF6/2020 EPI_ISL_508507 additional_host_info: Patient infected while traveling +# India/TF7/2020 EPI_ISL_508508 additional_host_info: Patient infected while traveling +# India/TF9/2020 EPI_ISL_508509 additional_host_info: Patient infected while traveling +# Madagascar/IP-01650/2020 EPI_ISL_508862 additional_location_info: A&C Hôtel restaurant et SPA +# SouthKorea/KCDC2209/2020 EPI_ISL_510548 additional_location_info imported +# SouthKorea/KCDC2211/2020 EPI_ISL_510549 additional_location_info imported +# SouthKorea/KCDC2271/2020 EPI_ISL_510609 additional_location_info imported +# SouthKorea/KCDC2291/2020 EPI_ISL_510627 additional_location_info imported +# SouthKorea/KCDC2299/2020 EPI_ISL_510635 additional_location_info imported +# SouthKorea/KCDC2300/2020 EPI_ISL_510636 additional_location_info imported +# SouthKorea/KCDC2323/2020 EPI_ISL_510659 additional_location_info imported ## Kuwait samples have their division set to what should be the location #note UPHL-03 and -04 are same patient #note UPHL-05 and -06 are same patient @@ -100,6 +489,114 @@ Argentina/PAIS-A0015/2020 EPI_ISL_430806 region_exposure Asia Argentina/PAIS-A0013/2020 EPI_ISL_430804 region_exposure Europe Argentina/PAIS-A0016/2020 EPI_ISL_430807 region_exposure Europe Argentina/PAIS-A0020/2020 EPI_ISL_430811 region_exposure Europe +Argentina/PAIS-A0001/2020 EPI_ISL_430793 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0002/2020 EPI_ISL_430794 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0003/2020 EPI_ISL_430795 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0004/2020 EPI_ISL_430796 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0007/2020 EPI_ISL_430799 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0008/2020 EPI_ISL_430800 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0009/2020 EPI_ISL_430801 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0012/2020 EPI_ISL_430803 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0013/2020 EPI_ISL_430804 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0016/2020 EPI_ISL_430807 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0018/2020 EPI_ISL_430809 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0019/2020 EPI_ISL_430810 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0020/2020 EPI_ISL_430811 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0021/2020 EPI_ISL_430812 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0022/2020 EPI_ISL_430813 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0023/2020 EPI_ISL_430814 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0024/2020 EPI_ISL_430815 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0025/2020 EPI_ISL_430816 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0026/2020 EPI_ISL_430817 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-A0027/2020 EPI_ISL_430818 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/PAIS-G0001/2020 EPI_ISL_499083 division Cordoba AR # previously Cordoba +Argentina/Heritas_HG001/2020 EPI_ISL_476496 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/Heritas_HG006/2020 EPI_ISL_476561 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/Heritas_HG007/2020 EPI_ISL_476565 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/Heritas_HG009/2020 EPI_ISL_476568 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/Heritas_HG015/2020 EPI_ISL_476567 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Argentina/Heritas_HG018/2020 EPI_ISL_476571 division Buenos Aires # previously Ciudad Autonoma de Buenos Aires +Australia/ACT0001/2020 EPI_ISL_498468 division Australian Capital Territory # previously Act +Australia/ACT0002/2020 EPI_ISL_498469 division Australian Capital Territory # previously Act +Australia/ACT0003/2020 EPI_ISL_498470 division Australian Capital Territory # previously Act +Australia/ACT0004/2020 EPI_ISL_498471 division Australian Capital Territory # previously Act +Australia/ACT0005/2020 EPI_ISL_498472 division Australian Capital Territory # previously Act +Australia/ACT0006/2020 EPI_ISL_498473 division Australian Capital Territory # previously Act +Australia/ACT0007/2020 EPI_ISL_498474 division Australian Capital Territory # previously Act +Australia/ACT0008/2020 EPI_ISL_498475 division Australian Capital Territory # previously Act +Australia/ACT0009/2020 EPI_ISL_498476 division Australian Capital Territory # previously Act +Australia/ACT0010/2020 EPI_ISL_498477 division Australian Capital Territory # previously Act +Australia/ACT0011/2020 EPI_ISL_498478 division Australian Capital Territory # previously Act +Australia/ACT0012/2020 EPI_ISL_498479 division Australian Capital Territory # previously Act +Australia/ACT0013/2020 EPI_ISL_498480 division Australian Capital Territory # previously Act +Australia/ACT0014/2020 EPI_ISL_498481 division Australian Capital Territory # previously Act +Australia/ACT0015/2020 EPI_ISL_498482 division Australian Capital Territory # previously Act +Australia/ACT0016/2020 EPI_ISL_498483 division Australian Capital Territory # previously Act +Australia/ACT0017/2020 EPI_ISL_498484 division Australian Capital Territory # previously Act +Australia/ACT0018/2020 EPI_ISL_498485 division Australian Capital Territory # previously Act +Australia/ACT0019/2020 EPI_ISL_498486 division Australian Capital Territory # previously Act +Australia/ACT0020/2020 EPI_ISL_498487 division Australian Capital Territory # previously Act +Australia/ACT0021/2020 EPI_ISL_498488 division Australian Capital Territory # previously Act +Australia/ACT0022/2020 EPI_ISL_498489 division Australian Capital Territory # previously Act +Australia/ACT0023/2020 EPI_ISL_498490 division Australian Capital Territory # previously Act +Australia/ACT0024/2020 EPI_ISL_498491 division Australian Capital Territory # previously Act +Australia/ACT0025/2020 EPI_ISL_498492 division Australian Capital Territory # previously Act +Australia/ACT0026/2020 EPI_ISL_498493 division Australian Capital Territory # previously Act +Australia/ACT0027/2020 EPI_ISL_498494 division Australian Capital Territory # previously Act +Australia/ACT0028/2020 EPI_ISL_498495 division Australian Capital Territory # previously Act +Australia/ACT0029/2020 EPI_ISL_498496 division Australian Capital Territory # previously Act +Australia/ACT0030/2020 EPI_ISL_498497 division Australian Capital Territory # previously Act +Australia/ACT0031/2020 EPI_ISL_498498 division Australian Capital Territory # previously Act +Australia/ACT0032/2020 EPI_ISL_498499 division Australian Capital Territory # previously Act +Australia/ACT0033/2020 EPI_ISL_498500 division Australian Capital Territory # previously Act +Australia/ACT0034/2020 EPI_ISL_498501 division Australian Capital Territory # previously Act +Australia/ACT0035/2020 EPI_ISL_498502 division Australian Capital Territory # previously Act +Australia/ACT0036/2020 EPI_ISL_498503 division Australian Capital Territory # previously Act +Australia/ACT0037/2020 EPI_ISL_498504 division Australian Capital Territory # previously Act +Australia/ACT0038/2020 EPI_ISL_498505 division Australian Capital Territory # previously Act +Australia/ACT0039/2020 EPI_ISL_498506 division Australian Capital Territory # previously Act +Australia/ACT0040/2020 EPI_ISL_498507 division Australian Capital Territory # previously Act +Australia/ACT0041/2020 EPI_ISL_498508 division Australian Capital Territory # previously Act +Australia/ACT0042/2020 EPI_ISL_498509 division Australian Capital Territory # previously Act +Australia/ACT0043/2020 EPI_ISL_498510 division Australian Capital Territory # previously Act +Australia/ACT0044/2020 EPI_ISL_498511 division Australian Capital Territory # previously Act +Australia/ACT0045/2020 EPI_ISL_498512 division Australian Capital Territory # previously Act +Australia/ACT0046/2020 EPI_ISL_498513 division Australian Capital Territory # previously Act +Australia/ACT0047/2020 EPI_ISL_498514 division Australian Capital Territory # previously Act +Australia/ACT0048/2020 EPI_ISL_498515 division Australian Capital Territory # previously Act +Australia/ACT0049/2020 EPI_ISL_498516 division Australian Capital Territory # previously Act +Australia/ACT0050/2020 EPI_ISL_498517 division Australian Capital Territory # previously Act +Australia/ACT0051/2020 EPI_ISL_498518 division Australian Capital Territory # previously Act +Australia/ACT0053/2020 EPI_ISL_498519 division Australian Capital Territory # previously Act +Australia/ACT0054/2020 EPI_ISL_498520 division Australian Capital Territory # previously Act +Australia/ACT0055/2020 EPI_ISL_498521 division Australian Capital Territory # previously Act +Australia/ACT0058/2020 EPI_ISL_498522 division Australian Capital Territory # previously Act +Australia/ACT0059/2020 EPI_ISL_498523 division Australian Capital Territory # previously Act +Australia/ACT0060/2020 EPI_ISL_498524 division Australian Capital Territory # previously Act +Australia/ACT0061/2020 EPI_ISL_498525 division Australian Capital Territory # previously Act +Australia/ACT0064/2020 EPI_ISL_498526 division Australian Capital Territory # previously Act +Australia/ACT0065/2020 EPI_ISL_498527 division Australian Capital Territory # previously Act +Australia/ACT0067/2020 EPI_ISL_498528 division Australian Capital Territory # previously Act +Australia/ACT0068/2020 EPI_ISL_498529 division Australian Capital Territory # previously Act +Australia/ACT0069/2020 EPI_ISL_498530 division Australian Capital Territory # previously Act +Australia/ACT0071/2020 EPI_ISL_498531 division Australian Capital Territory # previously Act +Australia/ACT0072/2020 EPI_ISL_498532 division Australian Capital Territory # previously Act +Australia/ACT0073/2020 EPI_ISL_498533 division Australian Capital Territory # previously Act +Australia/ACT0074/2020 EPI_ISL_498534 division Australian Capital Territory # previously Act +Australia/ACT0075/2020 EPI_ISL_498535 division Australian Capital Territory # previously Act +Australia/ACT0076/2020 EPI_ISL_498536 division Australian Capital Territory # previously Act +Australia/ACT0077/2020 EPI_ISL_498537 division Australian Capital Territory # previously Act +Australia/ACT0078/2020 EPI_ISL_498538 division Australian Capital Territory # previously Act +Australia/ACT0079/2020 EPI_ISL_498539 division Australian Capital Territory # previously Act +Australia/ACT0080/2020 EPI_ISL_498540 division Australian Capital Territory # previously Act +Australia/ACT0081/2020 EPI_ISL_498541 division Australian Capital Territory # previously Act +Australia/ACT0082/2020 EPI_ISL_498542 division Australian Capital Territory # previously Act +Australia/ACT0084/2020 EPI_ISL_498543 division Australian Capital Territory # previously Act +Australia/ACT0086/2020 EPI_ISL_498544 division Australian Capital Territory # previously Act +Australia/ACT0087/2020 EPI_ISL_498545 division Australian Capital Territory # previously Act +Australia/ACT0088/2020 EPI_ISL_498546 division Australian Capital Territory # previously Act +Australia/ACT0089/2020 EPI_ISL_498547 division Australian Capital Territory # previously Act +Australia/ACT0090/2020 EPI_ISL_498548 division Australian Capital Territory # previously Act Australia/NSW01/2020 EPI_ISL_407893 division_exposure Hubei Australia/NSW01/2020 EPI_ISL_407893 country_exposure China Australia/NSW01/2020 EPI_ISL_407893 region_exposure Asia @@ -143,10 +640,15 @@ Australia/NT19/2020 EPI_ISL_426636 division Northern Territory Australia/QLD01/2020 EPI_ISL_407894 region_exposure Asia # ? Australia/QLD01/2020 EPI_ISL_407894 country_exposure China # ? Australia/QLD01/2020 EPI_ISL_407894 division_exposure Hubei # ? +Australia/VIC01/2020 EPI_ISL_406844 location Clayton AU # previously Clayton Australia/VIC01/2020 EPI_ISL_406844 country_exposure China # ? Australia/VIC01/2020 EPI_ISL_406844 genbank_accession MT007544 Australia/VIC01/2020 EPI_ISL_406844 region_exposure Asia # ? Australia/VIC01/2020 EPI_ISL_406844 division_exposure Hubei # ? +Australia/SAP472/2020 EPI_ISL_508605 location +Australia/SAP473/2020 EPI_ISL_508606 location +Australia/SAP474/2020 EPI_ISL_508607 location +Australia/SAP475/2020 EPI_ISL_508608 location Austria/CeMM0003/2020 EPI_ISL_419656 country_exposure Italy # GISAID Austria/CeMM0003/2020 EPI_ISL_419656 region_exposure Europe # GISAID Austria/CeMM0003/2020 EPI_ISL_419656 division_exposure Italy # GISAID @@ -335,7 +837,7 @@ Austria/CeMM0186/2020 EPI_ISL_438028 division_exposure Italian cruise ship Austria/CeMM0186/2020 EPI_ISL_438028 country_exposure Italy Austria/CeMM0186/2020 EPI_ISL_438028 division Italian cruise ship Austria/CeMM0189/2020 EPI_ISL_438030 country_exposure Italy -Austria/CeMM0189/2020 EPI_ISL_438030 division_exposure Tyrol +Austria/CeMM0189/2020 EPI_ISL_438030 division_exposure South Tyrol Austria/CeMM0027/2020 EPI_ISL_475763 division Tyrol # previously false division Ischgl Austria/CeMM0027/2020 EPI_ISL_475763 location Ischgl Austria/CeMM0075/2020 EPI_ISL_475768 division Tyrol # previously false division Ischgl @@ -421,8 +923,8 @@ Austria/CeMM0563/2020 EPI_ISL_475913 location Losenstein Bangladesh/Akbiomed_01/2020 EPI_ISL_445244 division Bangladesh # whitespace Bangladesh/Akbiomed_01/2020 EPI_ISL_445244 country Bangladesh # whitespace Bangladesh/BCSIR_NILMRC_006/2020 EPI_ISL_455458 division_exposure Narayanganj -Bangladesh/BCSIR_NILMRC_008/2020 EPI_ISL_455459 division_exposure Mirpur -Bangladesh/BCSIR_NILMRC_007/2020 EPI_ISL_455420 division_exposure Mirpur +Bangladesh/BCSIR_NILMRC_008/2020 EPI_ISL_455459 location Mirpur +Bangladesh/BCSIR_NILMRC_007/2020 EPI_ISL_455420 location Mirpur Bangladesh/BCSIR-NILMRC_080/2020 EPI_ISL_464162 location Mohammadpur Bangladesh/BCSIR-NILMRC_073/2020 EPI_ISL_466689 location Uttara Bangladesh/BCSIR-NILMRC_074/2020 EPI_ISL_466690 location Gulshan @@ -475,7 +977,50 @@ Bangladesh/BCSIR-NILMRC_256/2020 EPI_ISL_490165 division Khulna # previously fal Bangladesh/BCSIR-NILMRC_256/2020 EPI_ISL_490165 location Jashore Bangladesh/BCSIR-NILMRC_257/2020 EPI_ISL_490168 division Khulna # previously false division Jashore Bangladesh/BCSIR-NILMRC_257/2020 EPI_ISL_490168 location Jashore +Bangladesh/BCSIR-NILMRC_258/2020 EPI_ISL_498253 division Khulna # previously false division Jashore +Bangladesh/BCSIR-NILMRC_258/2020 EPI_ISL_498253 location Jashore +Bangladesh/BCSIR-NILMRC_259/2020 EPI_ISL_498808 division Khulna # previously false division Jashore +Bangladesh/BCSIR-NILMRC_259/2020 EPI_ISL_498808 location Jashore +Bangladesh/BCSIR-NILMRC_260/2020 EPI_ISL_498254 division Khulna # previously false division Jashore +Bangladesh/BCSIR-NILMRC_260/2020 EPI_ISL_498254 location Jashore +Bangladesh/BCSIR-NILMRC_269/2020 EPI_ISL_498809 location Brahmanbaria Bangladesh/BARJ_CVASU_CTG_506/2020 EPI_ISL_450342 strain Bangladesh/BARJ-CVASU-CTG-506/2020 +Bangladesh/BARJ-CVASU-CTG-501/2020 EPI_ISL_450339 division Chattogram # previously Chittagong +Bangladesh/BARJ-CVASU-CTG-502/2020 EPI_ISL_450340 division Chattogram # previously Chittagong +Bangladesh/BARJ-CVASU-CTG-503/2020 EPI_ISL_450341 division Chattogram # previously Chittagong +Bangladesh/BARJ-CVASU-CTG-506/2020 EPI_ISL_450342 division Chattogram # previously Chittagong +Bangladesh/BARJ-CVASU-CTG-511/2020 EPI_ISL_450343 division Chattogram # previously Chittagong +Bangladesh/BARJ-CVASU-CTG-517/2020 EPI_ISL_450344 division Chattogram # previously Chittagong +Bangladesh/BARJ-CVASU-CTG-518/2020 EPI_ISL_450345 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_066/2020 EPI_ISL_464164 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_067/2020 EPI_ISL_466637 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_069/2020 EPI_ISL_466638 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_070/2020 EPI_ISL_466639 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_071/2020 EPI_ISL_466692 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_072/2020 EPI_ISL_466687 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_201/2020 EPI_ISL_483644 division Chattogram # previously Chittagong +Bangladesh/CHRF_0006/2020 EPI_ISL_468074 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_186/2020 EPI_ISL_483694 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_187/2020 EPI_ISL_483632 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_188/2020 EPI_ISL_483633 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_190/2020 EPI_ISL_483695 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_192/2020 EPI_ISL_483634 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_193/2020 EPI_ISL_483635 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_194/2020 EPI_ISL_483699 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_195/2020 EPI_ISL_483641 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_196/2020 EPI_ISL_483636 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_198/2020 EPI_ISL_483642 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_199/2020 EPI_ISL_483643 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_203/2020 EPI_ISL_483700 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_204/2020 EPI_ISL_483686 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_205/2020 EPI_ISL_483687 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_206/2020 EPI_ISL_483688 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_207/2020 EPI_ISL_483689 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC_208/2020 EPI_ISL_483690 division Chattogram # previously Chittagong +Bangladesh/BCSIR-NILMRC-261/2020 EPI_ISL_503958 division Khulna # previously false division Jashore +Bangladesh/BCSIR-NILMRC-261/2020 EPI_ISL_503958 location Jashore +Bangladesh/BCSIR-NILMRC-262/2020 EPI_ISL_504040 division Khulna # previously false division Jashore +Bangladesh/BCSIR-NILMRC-262/2020 EPI_ISL_504040 location Jashore Beijing/105/2020 EPI_ISL_413518 location Beijing Beijing/DT-WH01/2020 EPI_ISL_452360 region_exposure Asia Beijing/DT-WH01/2020 EPI_ISL_452360 country_exposure China @@ -579,7 +1124,7 @@ Beijing/DT-travelNO01/2020 EPI_ISL_452342 division_exposure Oslo Beijing/DT-travelNO01/2020 EPI_ISL_452342 location_exposure Oslo Beijing/DT-travelPAK01/2020 EPI_ISL_452328 region_exposure Asia Beijing/DT-travelPAK01/2020 EPI_ISL_452328 country_exposure Pakistan -Beijing/DT-travelPAK01/2020 EPI_ISL_452328 division_exposure Islamabad Capital Territory +Beijing/DT-travelPAK01/2020 EPI_ISL_452328 division_exposure Islamabad Beijing/DT-travelPAK01/2020 EPI_ISL_452328 location_exposure Islamabad Beijing/DT-travelUK01/2020 EPI_ISL_452355 region_exposure Europe Beijing/DT-travelUK01/2020 EPI_ISL_452355 country_exposure United Kingdom @@ -1814,7 +2359,6 @@ SARS-CoV-2/Benin/314/03.2020 EPI_ISL_476834 division_exposure France SARS-CoV-2/Benin/461/03.2020 EPI_ISL_476833 division_exposure France Benin/1092/2020 EPI_ISL_476827 region_exposure Europe Benin/1950/2020 EPI_ISL_476830 region_exposure Europe -Benin/2012/2020 EPI_ISL_476831 region_exposure Europe SARS-CoV-2/Benin/314/03.2020 EPI_ISL_476834 region_exposure Europe SARS-CoV-2/Benin/461/03.2020 EPI_ISL_476833 region_exposure Europe SARS-CoV-2/Benin/314/03.2020 EPI_ISL_476834 strain Benin/314/2020 @@ -1979,6 +2523,7 @@ Brazil/SPBR-12/2020 EPI_ISL_416034 division_exposure USA Brazil/SPBR-14/2020 EPI_ISL_416036 region_exposure Europe Brazil/SPBR-14/2020 EPI_ISL_416036 country_exposure Italy Brazil/SPBR-14/2020 EPI_ISL_416036 division_exposure Italy +# Brazil/RJ-0395/2020 EPI_ISL_500864 # sample obtained 1 hour after birth Brazil/RJ-2422/2020 EPI_ISL_467352 location Queimados Brazil/RJ-1555/2020 EPI_ISL_467344 location Petropolis Brazil/RJ-2669/2020 EPI_ISL_467353 location Niteroi @@ -2011,6 +2556,53 @@ Brazil/UFRJ-IBEX_58090/2020 EPI_ISL_492046 division São Paulo # previously Sao Brazil/UFRJ-IBEX_58110/2020 EPI_ISL_492047 division São Paulo # previously Sao Paulo Brazil/UFRJ-IBEX_58090/2020 EPI_ISL_492046 location São Paulo # previously Sao Paulo Brazil/UFRJ-IBEX_58110/2020 EPI_ISL_492047 location São Paulo # previously Sao Paulo +Brazil/GO0106/2020 EPI_ISL_417930 division Goiás # previously Goias +Brazil/GO0207/2020 EPI_ISL_470574 division Goiás # previously Goias +Brazil/GO0208/2020 EPI_ISL_470575 division Goiás # previously Goias +Brazil/GO0209/2020 EPI_ISL_470576 division Goiás # previously Goias +Brazil/GO0210/2020 EPI_ISL_470577 division Goiás # previously Goias +Brazil/L10_CD167/2020 EPI_ISL_476182 division Ceará # previously Ceara +Brazil/L10_CD170/2020 EPI_ISL_476183 division Ceará # previously Ceara +Brazil/L10_CD171/2020 EPI_ISL_476184 division Ceará # previously Ceara +Brazil/L10_CD172/2020 EPI_ISL_476185 division Ceará # previously Ceara +Brazil/L10_CD173/2020 EPI_ISL_476186 division Ceará # previously Ceara +Brazil/L11_CD193/2020 EPI_ISL_476198 division Ceará # previously Ceara +Brazil/L11_CD195/2020 EPI_ISL_476199 division Ceará # previously Ceara +Brazil/L11_CD196/2020 EPI_ISL_476200 division Ceará # previously Ceara +Brazil/L12_CD204/2020 EPI_ISL_476212 division Ceará # previously Ceara +Brazil/L12_CD213/2020 EPI_ISL_476213 division Ceará # previously Ceara +Brazil/L12_CD214/2020 EPI_ISL_476214 division Ceará # previously Ceara +Brazil/L12_CD223/2020 EPI_ISL_476217 division Ceará # previously Ceara +Brazil/L12_CD224/2020 EPI_ISL_476218 division Ceará # previously Ceara +Brazil/L12_CD228/2020 EPI_ISL_476219 division Ceará # previously Ceara +Brazil/L13_CD168/2020 EPI_ISL_476225 division Ceará # previously Ceara +Brazil/L13_CD169/2020 EPI_ISL_476226 division Ceará # previously Ceara +Brazil/L13_CD207/2020 EPI_ISL_476227 division Ceará # previously Ceara +Brazil/L13_CD208/2020 EPI_ISL_476228 division Ceará # previously Ceara +Brazil/L13_CD211/2020 EPI_ISL_476229 division Ceará # previously Ceara +Brazil/L13_CD230/2020 EPI_ISL_476232 division Ceará # previously Ceara +Brazil/L16_CD332/2020 EPI_ISL_476281 division Ceará # previously Ceara +Brazil/L16_CD334/2020 EPI_ISL_476283 division Ceará # previously Ceara +Brazil/L16_CD344/2020 EPI_ISL_476288 division Ceará # previously Ceara +Brazil/L16_CD346/2020 EPI_ISL_476289 division Ceará # previously Ceara +Brazil/L17_CD360/2020 EPI_ISL_476306 division Ceará # previously Ceara +Brazil/L17_CD361/2020 EPI_ISL_476307 division Ceará # previously Ceara +Brazil/L17_CD362/2020 EPI_ISL_476308 division Ceará # previously Ceara +Brazil/L19_CD408/2020 EPI_ISL_476331 division Ceará # previously Ceara +Brazil/L21_CD446/2020 EPI_ISL_476368 division Ceará # previously Ceara +Brazil/L21_CD447/2020 EPI_ISL_476369 division Ceará # previously Ceara +Brazil/L11_CD179/2020 EPI_ISL_476191 division Paraná # previously Parana +Brazil/L11_CD201/2020 EPI_ISL_476202 division Paraná # previously Parana +Brazil/L16_CD321/2020 EPI_ISL_476280 division Paraná # previously Parana +Brazil/L16_CD333/2020 EPI_ISL_476282 division Paraná # previously Parana +Brazil/L17_CD365/2020 EPI_ISL_476311 division Paraná # previously Parana +Brazil/L17_CD366/2020 EPI_ISL_476312 division Paraná # previously Parana +Brazil/L17_CD367/2020 EPI_ISL_476313 division Paraná # previously Parana +Brazil/L17_CD368/2020 EPI_ISL_476314 division Paraná # previously Parana +Brazil/L19_CD389/2020 EPI_ISL_476318 division Paraná # previously Parana +Brazil/L19_CD400/2020 EPI_ISL_476325 division Paraná # previously Parana +Brazil/L21_CD448/2020 EPI_ISL_476370 division Paraná # previously Parana +Brazil/PR-LRV-01/2020 EPI_ISL_510535 division Paraná # previously Parana Bucuresti/ChVir7244/2020 EPI_ISL_467778 division Bucharest # previously Bucuresti Bucuresti/ChVir7245/2020 EPI_ISL_467779 division Bucharest # previously Bucuresti Cambodia/0012/2020 EPI_ISL_411902 country_exposure China # GISAID @@ -2234,6 +2826,34 @@ China/WH-09/2020 EPI_ISL_411957 division Hubei China/WH-09/2020 EPI_ISL_411957 genbank_accession MT093631 China/WH-09/2020 EPI_ISL_411957 location Wuhan Chongqing/YC01/2020 EPI_ISL_408478 division Chongqing +Colombia/81402/2020 EPI_ISL_497736 division Risaralda # previously false division Pereira +Colombia/81402/2020 EPI_ISL_497736 location Pereira +Colombia/87267/2020 EPI_ISL_497745 division Risaralda # previously false division Pereira +Colombia/87267/2020 EPI_ISL_497745 location Pereira +Colombia/95663/2020 EPI_ISL_498165 division Risaralda # previously false division Pereira +Colombia/95663/2020 EPI_ISL_498165 location Pereira +Colombia/84730/2020 EPI_ISL_497738 division Bolivar # previously false division Cartagena +Colombia/84730/2020 EPI_ISL_497738 location Cartagena +Colombia/94411/2020 EPI_ISL_498161 division Bolivar # previously false division Cartagena +Colombia/94411/2020 EPI_ISL_498161 location Cartagena +Colombia/85082/2020 EPI_ISL_497744 division Quindio # previously false division Armenia +Colombia/85082/2020 EPI_ISL_497744 location Armenia +Colombia/87968/2020 EPI_ISL_498152 division Magdalena # previously false division Santa Marta +Colombia/87968/2020 EPI_ISL_498152 location Santa Marta +Colombia/95839/2020 EPI_ISL_498166 division Magdalena # previously false division Santa Marta +Colombia/95839/2020 EPI_ISL_498166 location Santa Marta +Colombia/87973/2020 EPI_ISL_498153 division Cesar # previously false division Valledupar +Colombia/87973/2020 EPI_ISL_498153 location Valledupar +Colombia/89781/2020 EPI_ISL_498160 division Cesar # previously false division Valledupar +Colombia/89781/2020 EPI_ISL_498160 location Valledupar +Colombia/88496/2020 EPI_ISL_498154 division Cundinamarca # previously false division Zipaquira +Colombia/88496/2020 EPI_ISL_498154 location Zipaquira +Colombia/88612/2020 EPI_ISL_498155 division Atlantico # previously false division Barranquilla +Colombia/88612/2020 EPI_ISL_498155 location Barranquilla +Colombia/88871/2020 EPI_ISL_498158 division Boyaca # previously false division Togui +Colombia/88871/2020 EPI_ISL_498158 location Togui +Colombia/95637/2020 EPI_ISL_498164 division Meta # previously false division Villavicencio +Colombia/95637/2020 EPI_ISL_498164 location Villavicencio Colombia/INS-101935/2020 EPI_ISL_456153 division Magdalena # previously Cienaga Colombia/INS-101935/2020 EPI_ISL_456153 location Cienaga Colombia/INS-103039/2020 EPI_ISL_456144 division Departamento de Amazonas # previously Leticia @@ -2295,6 +2915,8 @@ Colombia/GVI-97782/2020 EPI_ISL_447803 location Villavicencio # Swapped Colombia/GVI-97782/2020 EPI_ISL_447803 division Meta Colombia/GVI-97783/2020 EPI_ISL_447804 location Villavicencio # Swapped Colombia/GVI-97783/2020 EPI_ISL_447804 division Meta +Colombia/GVI97517/2020 EPI_ISL_447816 division Cordoba CO # previously Cordoba +Colombia/GVI97527/2020 EPI_ISL_447817 division Cordoba CO # previously Cordoba Colombia/INS-79449/2020 EPI_ISL_456133 location Cali Colombia/INS-79449/2020 EPI_ISL_456133 division Valle del Cauca # previously Cali Colombia/INS-79773/2020 EPI_ISL_456134 location Cali @@ -2374,7 +2996,7 @@ CostaRica/INC-0027/2020 EPI_ISL_491439 country_exposure France CostaRica/INC-0027/2020 EPI_ISL_491439 division_exposure France CostaRica/INC-0028/2020 EPI_ISL_491440 location Grecia CostaRica/INC-0029/2020 EPI_ISL_491441 location Curridabat -CostaRica/INC-0030/2020 EPI_ISL_491442 location Santa Ana +CostaRica/INC-0030/2020 EPI_ISL_491442 location Santa Ana CR # previously Santa Ana CostaRica/INC-0031/2020 EPI_ISL_491443 location Perez Zeledon CostaRica/INC-0031/2020 EPI_ISL_491443 region_exposure North America CostaRica/INC-0031/2020 EPI_ISL_491443 country_exposure USA @@ -3109,6 +3731,7 @@ Ecuador/HGSQ-USFQ-018/2020 EPI_ISL_422563 division_exposure Guayas Ecuador/20640/2020 EPI_ISL_490201 division Guayas # previously false division Guayaquil Ecuador/20640/2020 EPI_ISL_490201 location Guayaquil Ecuador/52872/2020 EPI_ISL_491946 location Ventanas # previously Ventana +Ecuador/USFQ-120/2020 EPI_ISL_491932 location Awa Reserve #used to be Reciento but couldn't find this. Indigenous community from extra loc info England/01/2020 EPI_ISL_407071 division_exposure Hubei # first cases were reported in media as being son & mother from China England/01/2020 EPI_ISL_407071 country_exposure China # first cases were reported in media as being son & mother from China England/01/2020 EPI_ISL_407071 country United Kingdom @@ -14862,6 +15485,162 @@ France/Pollionay_1733/2020 EPI_ISL_416745 division Auvergne-Rhône-Alpes France/RA739/2020 EPI_ISL_410486 division Auvergne-Rhône-Alpes # previously Auvergne Rhone Alpes France/Valence_425/2020 EPI_ISL_416746 division Auvergne-Rhône-Alpes France/Valence_532/2020 EPI_ISL_416749 division Auvergne-Rhône-Alpes +France/41071320/2020 EPI_ISL_505003 division Provence-Alpes-Côte d'Azur # previously Paca +France/IRBA001/2020 EPI_ISL_506041 division Ile de France # previously Idf +France/ARA12197/2020 EPI_ISL_509006 location Villefranche-sur-Saône # previously Villefranche +France/ARA18066/2020 EPI_ISL_509015 location Villefranche-sur-Saône # previously Villefranche +France/ARA19340/2020 EPI_ISL_508978 location Villefranche-sur-Saône # previously Villefranche +France/ARA24115/2020 EPI_ISL_508932 location Villefranche-sur-Saône # previously Villefranche +France/ARA01890/2020 EPI_ISL_508871 division Auvergne-Rhône-Alpes # previously Ara +France/ARA02052/2020 EPI_ISL_509010 division Auvergne-Rhône-Alpes # previously Ara +France/ARA05288/2020 EPI_ISL_508933 division Auvergne-Rhône-Alpes # previously Ara +France/ARA06923/2020 EPI_ISL_508937 division Auvergne-Rhône-Alpes # previously Ara +France/ARA07148/2020 EPI_ISL_508939 division Auvergne-Rhône-Alpes # previously Ara +France/ARA07169/2020 EPI_ISL_508940 division Auvergne-Rhône-Alpes # previously Ara +France/ARA07314/2020 EPI_ISL_508942 division Auvergne-Rhône-Alpes # previously Ara +France/ARA07639/2020 EPI_ISL_508872 division Auvergne-Rhône-Alpes # previously Ara +France/ARA07910/2020 EPI_ISL_508873 division Auvergne-Rhône-Alpes # previously Ara +France/ARA08417/2020 EPI_ISL_508948 division Auvergne-Rhône-Alpes # previously Ara +France/ARA08589/2020 EPI_ISL_508874 division Auvergne-Rhône-Alpes # previously Ara +France/ARA09178/2020 EPI_ISL_508877 division Auvergne-Rhône-Alpes # previously Ara +France/ARA10160/2020 EPI_ISL_508879 division Auvergne-Rhône-Alpes # previously Ara +France/ARA10175/2020 EPI_ISL_508880 division Auvergne-Rhône-Alpes # previously Ara +France/ARA10580/2020 EPI_ISL_508999 division Auvergne-Rhône-Alpes # previously Ara +France/ARA10821/2020 EPI_ISL_509000 division Auvergne-Rhône-Alpes # previously Ara +France/ARA10823/2020 EPI_ISL_508882 division Auvergne-Rhône-Alpes # previously Ara +France/ARA10825/2020 EPI_ISL_508883 division Auvergne-Rhône-Alpes # previously Ara +France/ARA10863/2020 EPI_ISL_509001 division Auvergne-Rhône-Alpes # previously Ara +France/ARA1125/2020 EPI_ISL_509002 division Auvergne-Rhône-Alpes # previously Ara +France/ARA12287/2020 EPI_ISL_508951 division Auvergne-Rhône-Alpes # previously Ara +France/ARA12740/2020 EPI_ISL_509008 division Auvergne-Rhône-Alpes # previously Ara +France/ARA12742/2020 EPI_ISL_508953 division Auvergne-Rhône-Alpes # previously Ara +France/ARA1276/2020 EPI_ISL_509007 division Auvergne-Rhône-Alpes # previously Ara +France/ARA13353/2020 EPI_ISL_508954 division Auvergne-Rhône-Alpes # previously Ara +France/ARA13367/2020 EPI_ISL_508955 division Auvergne-Rhône-Alpes # previously Ara +France/ARA13374/2020 EPI_ISL_508956 division Auvergne-Rhône-Alpes # previously Ara +France/ARA13515/2020 EPI_ISL_508957 division Auvergne-Rhône-Alpes # previously Ara +France/ARA13746/2020 EPI_ISL_508986 division Auvergne-Rhône-Alpes # previously Ara +France/ARA14226/2020 EPI_ISL_508884 division Auvergne-Rhône-Alpes # previously Ara +France/ARA14350/2020 EPI_ISL_508885 division Auvergne-Rhône-Alpes # previously Ara +France/ARA14353/2020 EPI_ISL_508886 division Auvergne-Rhône-Alpes # previously Ara +France/ARA14443/2020 EPI_ISL_508887 division Auvergne-Rhône-Alpes # previously Ara +France/ARA14456/2020 EPI_ISL_508888 division Auvergne-Rhône-Alpes # previously Ara +France/ARA14570/2020 EPI_ISL_508889 division Auvergne-Rhône-Alpes # previously Ara +France/ARA14623/2020 EPI_ISL_508890 division Auvergne-Rhône-Alpes # previously Ara +France/ARA14624/2020 EPI_ISL_508891 division Auvergne-Rhône-Alpes # previously Ara +France/ARA14627/2020 EPI_ISL_508892 division Auvergne-Rhône-Alpes # previously Ara +France/ARA14735/2020 EPI_ISL_508893 division Auvergne-Rhône-Alpes # previously Ara +France/ARA14791/2020 EPI_ISL_508894 division Auvergne-Rhône-Alpes # previously Ara +France/ARA1492/2020 EPI_ISL_508895 division Auvergne-Rhône-Alpes # previously Ara +France/ARA14951/2020 EPI_ISL_508896 division Auvergne-Rhône-Alpes # previously Ara +France/ARA14953/2020 EPI_ISL_508897 division Auvergne-Rhône-Alpes # previously Ara +France/ARA14993/2020 EPI_ISL_508898 division Auvergne-Rhône-Alpes # previously Ara +France/ARA14997/2020 EPI_ISL_508899 division Auvergne-Rhône-Alpes # previously Ara +France/ARA15119/2020 EPI_ISL_508900 division Auvergne-Rhône-Alpes # previously Ara +France/ARA15126/2020 EPI_ISL_508901 division Auvergne-Rhône-Alpes # previously Ara +France/ARA15224/2020 EPI_ISL_508902 division Auvergne-Rhône-Alpes # previously Ara +France/ARA15296/2020 EPI_ISL_508903 division Auvergne-Rhône-Alpes # previously Ara +France/ARA16170/2020 EPI_ISL_508904 division Auvergne-Rhône-Alpes # previously Ara +France/ARA16213/2020 EPI_ISL_508905 division Auvergne-Rhône-Alpes # previously Ara +France/ARA16220/2020 EPI_ISL_508906 division Auvergne-Rhône-Alpes # previously Ara +France/ARA16251/2020 EPI_ISL_508907 division Auvergne-Rhône-Alpes # previously Ara +France/ARA16322/2020 EPI_ISL_508908 division Auvergne-Rhône-Alpes # previously Ara +France/ARA16647/2020 EPI_ISL_509009 division Auvergne-Rhône-Alpes # previously Ara +France/ARA16665/2020 EPI_ISL_508987 division Auvergne-Rhône-Alpes # previously Ara +France/ARA17037/2020 EPI_ISL_509011 division Auvergne-Rhône-Alpes # previously Ara +France/ARA17330/2020 EPI_ISL_508959 division Auvergne-Rhône-Alpes # previously Ara +France/ARA17410/2020 EPI_ISL_509013 division Auvergne-Rhône-Alpes # previously Ara +France/ARA17573/2020 EPI_ISL_509014 division Auvergne-Rhône-Alpes # previously Ara +France/ARA17747/2020 EPI_ISL_508960 division Auvergne-Rhône-Alpes # previously Ara +France/ARA1783/2020 EPI_ISL_508961 division Auvergne-Rhône-Alpes # previously Ara +France/ARA1811/2020 EPI_ISL_508962 division Auvergne-Rhône-Alpes # previously Ara +France/ARA18212/2020 EPI_ISL_508963 division Auvergne-Rhône-Alpes # previously Ara +France/ARA18272/2020 EPI_ISL_508964 division Auvergne-Rhône-Alpes # previously Ara +France/ARA18275/2020 EPI_ISL_508965 division Auvergne-Rhône-Alpes # previously Ara +France/ARA18366/2020 EPI_ISL_508967 division Auvergne-Rhône-Alpes # previously Ara +France/ARA18440/2020 EPI_ISL_508969 division Auvergne-Rhône-Alpes # previously Ara +France/ARA18487/2020 EPI_ISL_508970 division Auvergne-Rhône-Alpes # previously Ara +France/ARA18625/2020 EPI_ISL_508971 division Auvergne-Rhône-Alpes # previously Ara +France/ARA18634/2020 EPI_ISL_508972 division Auvergne-Rhône-Alpes # previously Ara +France/ARA18748/2020 EPI_ISL_508973 division Auvergne-Rhône-Alpes # previously Ara +France/ARA18783/2020 EPI_ISL_508974 division Auvergne-Rhône-Alpes # previously Ara +France/ARA19311/2020 EPI_ISL_508977 division Auvergne-Rhône-Alpes # previously Ara +France/ARA19556/2020 EPI_ISL_508979 division Auvergne-Rhône-Alpes # previously Ara +France/ARA19570/2020 EPI_ISL_508980 division Auvergne-Rhône-Alpes # previously Ara +France/ARA19928/2020 EPI_ISL_508981 division Auvergne-Rhône-Alpes # previously Ara +France/ARA20073/2020 EPI_ISL_508982 division Auvergne-Rhône-Alpes # previously Ara +France/ARA20154/2020 EPI_ISL_508983 division Auvergne-Rhône-Alpes # previously Ara +France/ARA20193/2020 EPI_ISL_508984 division Auvergne-Rhône-Alpes # previously Ara +France/ARA20254/2020 EPI_ISL_508985 division Auvergne-Rhône-Alpes # previously Ara +France/ARA2068/2020 EPI_ISL_508988 division Auvergne-Rhône-Alpes # previously Ara +France/ARA20756/2020 EPI_ISL_508912 division Auvergne-Rhône-Alpes # previously Ara +France/ARA20768/2020 EPI_ISL_508913 division Auvergne-Rhône-Alpes # previously Ara +France/ARA20829/2020 EPI_ISL_508914 division Auvergne-Rhône-Alpes # previously Ara +France/ARA20869/2020 EPI_ISL_508990 division Auvergne-Rhône-Alpes # previously Ara +France/ARA20976/2020 EPI_ISL_508915 division Auvergne-Rhône-Alpes # previously Ara +France/ARA21154/2020 EPI_ISL_508991 division Auvergne-Rhône-Alpes # previously Ara +France/ARA21163/2020 EPI_ISL_508992 division Auvergne-Rhône-Alpes # previously Ara +France/ARA21170/2020 EPI_ISL_508916 division Auvergne-Rhône-Alpes # previously Ara +France/ARA21210/2020 EPI_ISL_508993 division Auvergne-Rhône-Alpes # previously Ara +France/ARA21360/2020 EPI_ISL_508989 division Auvergne-Rhône-Alpes # previously Ara +France/ARA21399/2020 EPI_ISL_508994 division Auvergne-Rhône-Alpes # previously Ara +France/ARA21941/2020 EPI_ISL_508995 division Auvergne-Rhône-Alpes # previously Ara +France/ARA22088/2020 EPI_ISL_508996 division Auvergne-Rhône-Alpes # previously Ara +France/ARA22132/2020 EPI_ISL_508997 division Auvergne-Rhône-Alpes # previously Ara +France/ARA2221/2020 EPI_ISL_508917 division Auvergne-Rhône-Alpes # previously Ara +France/ARA22592/2020 EPI_ISL_508918 division Auvergne-Rhône-Alpes # previously Ara +France/ARA22647/2020 EPI_ISL_508919 division Auvergne-Rhône-Alpes # previously Ara +France/ARA22650/2020 EPI_ISL_508920 division Auvergne-Rhône-Alpes # previously Ara +France/ARA22670/2020 EPI_ISL_508921 division Auvergne-Rhône-Alpes # previously Ara +France/ARA22864/2020 EPI_ISL_508922 division Auvergne-Rhône-Alpes # previously Ara +France/ARA23001/2020 EPI_ISL_508923 division Auvergne-Rhône-Alpes # previously Ara +France/ARA23076/2020 EPI_ISL_508924 division Auvergne-Rhône-Alpes # previously Ara +France/ARA23092/2020 EPI_ISL_508925 division Auvergne-Rhône-Alpes # previously Ara +France/ARA23121/2020 EPI_ISL_508926 division Auvergne-Rhône-Alpes # previously Ara +France/ARA23544/2020 EPI_ISL_508927 division Auvergne-Rhône-Alpes # previously Ara +France/ARA23813/2020 EPI_ISL_508928 division Auvergne-Rhône-Alpes # previously Ara +France/ARA23893/2020 EPI_ISL_508929 division Auvergne-Rhône-Alpes # previously Ara +France/ARA23943/2020 EPI_ISL_508930 division Auvergne-Rhône-Alpes # previously Ara +France/ARA0591/2020 EPI_ISL_508934 division Auvergne-Rhône-Alpes # previously Ara +France/ARA0592/2020 EPI_ISL_508935 division Auvergne-Rhône-Alpes # previously Ara +France/ARA06032/2020 EPI_ISL_508936 division Auvergne-Rhône-Alpes # previously Ara +France/ARA07055/2020 EPI_ISL_508938 division Auvergne-Rhône-Alpes # previously Ara +France/ARA07731/2020 EPI_ISL_508944 division Auvergne-Rhône-Alpes # previously Ara +France/ARA18437/2020 EPI_ISL_508968 division Auvergne-Rhône-Alpes # previously Ara +France/ARA0731/2020 EPI_ISL_508941 division Auvergne-Rhône-Alpes # previously Ara +France/ARA07722/2020 EPI_ISL_508943 division Auvergne-Rhône-Alpes # previously Ara +France/ARA0779/2020 EPI_ISL_508945 division Auvergne-Rhône-Alpes # previously Ara +France/ARA08067/2020 EPI_ISL_508946 division Auvergne-Rhône-Alpes # previously Ara +France/ARA0873/2020 EPI_ISL_508875 division Auvergne-Rhône-Alpes # previously Ara +France/ARA08938/2020 EPI_ISL_508876 division Auvergne-Rhône-Alpes # previously Ara +France/ARA12151/2020 EPI_ISL_509005 division Auvergne-Rhône-Alpes # previously Ara +France/ARA12155/2020 EPI_ISL_508949 division Auvergne-Rhône-Alpes # previously Ara +France/ARA12282/2020 EPI_ISL_508950 division Auvergne-Rhône-Alpes # previously Ara +France/ARA12638/2020 EPI_ISL_508952 division Auvergne-Rhône-Alpes # previously Ara +France/ARA0814/2020 EPI_ISL_508947 division Auvergne-Rhône-Alpes # previously Ara +France/ARA09193/2020 EPI_ISL_508878 division Auvergne-Rhône-Alpes # previously Ara +France/ARA9476/2020 EPI_ISL_509004 division Auvergne-Rhône-Alpes # previously Ara +France/ARA9584/2020 EPI_ISL_509003 division Auvergne-Rhône-Alpes # previously Ara +France/ARA10242/2020 EPI_ISL_508881 division Auvergne-Rhône-Alpes # previously Ara +France/ARA10441/2020 EPI_ISL_508998 division Auvergne-Rhône-Alpes # previously Ara +France/ARA18314/2020 EPI_ISL_508966 division Auvergne-Rhône-Alpes # previously Ara +France/ARA18826/2020 EPI_ISL_508975 division Auvergne-Rhône-Alpes # previously Ara +France/ARA12197/2020 EPI_ISL_509006 division Auvergne-Rhône-Alpes # previously Ara +France/ARA18066/2020 EPI_ISL_509015 division Auvergne-Rhône-Alpes # previously Ara +France/ARA19340/2020 EPI_ISL_508978 division Auvergne-Rhône-Alpes # previously Ara +France/ARA24115/2020 EPI_ISL_508932 division Auvergne-Rhône-Alpes # previously Ara +France/ARA17177/2020 EPI_ISL_508958 division Auvergne-Rhône-Alpes # previously Ara +France/ARA17181/2020 EPI_ISL_509012 division Auvergne-Rhône-Alpes # previously Ara +France/ARA18148/2020 EPI_ISL_509016 division Auvergne-Rhône-Alpes # previously Ara +France/ARA19119/2020 EPI_ISL_508976 division Auvergne-Rhône-Alpes # previously Ara +France/ARA24023/2020 EPI_ISL_508931 division Auvergne-Rhône-Alpes # previously Ara +France/MP01829/2020 EPI_ISL_508909 division Occitanie # previously Mp +France/NA01745/2020 EPI_ISL_508910 division Nouvelle-Aquitaine # previously Na +France/PACA01926/2020 EPI_ISL_508911 division Provence-Alpes-Côte d'Azur # previously Paca +France/BMPM/2020 EPI_ISL_510530 division Provence-Alpes-Côte d'Azur # previously false division Marseille +France/BMPM/2020 EPI_ISL_510530 location Marseille +France/FR/2020 EPI_ISL_510527 division Provence-Alpes-Côte d'Azur # previously false division Marseille +France/FR/2020 EPI_ISL_510527 location Marseille Georgia/Tb-6572/2020 EPI_ISL_447056 region Asia #previously Europe Georgia/Tb-6598/2020 EPI_ISL_447055 region Asia #previously Europe Georgia/Tb-22208/2020 EPI_ISL_470876 region Asia # previously Europe @@ -14946,7 +15725,7 @@ Germany/FrankfurtFFM7/2020 EPI_ISL_452223 region_exposure Asia Germany/NRW-54/2020 EPI_ISL_452180 location Duesseldorf Germany/NRW-54/2020 EPI_ISL_452180 division North Rhine Westphalia # previously Duesseldorf Germany/Muenster_FI1103201/2020 EPI_ISL_463008 division_exposure South Tyrol -Germany/Muenster_FI1103201/2020 EPI_ISL_463008 country_exposure Austria +Germany/Muenster_FI1103201/2020 EPI_ISL_463008 country_exposure Italy Germany/MGZ-01/2020 EPI_ISL_490205 division Bavaria # previously false division Munich Germany/MGZ-01/2020 EPI_ISL_490205 location Munich Germany/MGZ-02/2020 EPI_ISL_490206 division Bavaria # previously false division Munich @@ -14955,6 +15734,47 @@ Germany/MGZ-03/2020 EPI_ISL_490207 division Bavaria # previously false division Germany/MGZ-03/2020 EPI_ISL_490207 location Munich Germany/MGZ-04/2020 EPI_ISL_490208 division Bavaria # previously false division Munich Germany/MGZ-04/2020 EPI_ISL_490208 location Munich +Germany/BW-UT-006/2020 EPI_ISL_508687 location Tuebingen # previously Tübingen +Germany/BW-UT-009/2020 EPI_ISL_508688 location Tuebingen # previously Tübingen +Germany/BW-UT-010/2020 EPI_ISL_508689 location Tuebingen # previously Tübingen +Germany/BW-UT-011/2020 EPI_ISL_508690 location Tuebingen # previously Tübingen +Germany/BW-UT-012/2020 EPI_ISL_508691 location Tuebingen # previously Tübingen +Germany/BW-UT-013/2020 EPI_ISL_508692 location Tuebingen # previously Tübingen +Germany/BW-UT-014/2020 EPI_ISL_508693 location Tuebingen # previously Tübingen +Germany/BW-UT-015/2020 EPI_ISL_508694 location Tuebingen # previously Tübingen +Germany/BW-UT-016/2020 EPI_ISL_508695 location Tuebingen # previously Tübingen +Germany/BW-UT-018/2020 EPI_ISL_508696 location Tuebingen # previously Tübingen +Germany/BW-UT-019/2020 EPI_ISL_508697 location Tuebingen # previously Tübingen +Germany/BW-UT-021/2020 EPI_ISL_508698 location Tuebingen # previously Tübingen +Germany/BW-UT-024/2020 EPI_ISL_508699 location Tuebingen # previously Tübingen +Germany/BW-UT-025/2020 EPI_ISL_508700 location Tuebingen # previously Tübingen +Germany/BW-UT-026/2020 EPI_ISL_508701 location Tuebingen # previously Tübingen +Germany/BW-UT-027/2020 EPI_ISL_508702 location Tuebingen # previously Tübingen +Germany/BW-UT-028/2020 EPI_ISL_508703 location Tuebingen # previously Tübingen +Germany/BW-UT-029/2020 EPI_ISL_508704 location Tuebingen # previously Tübingen +Germany/BW-UT-006/2020 EPI_ISL_508687 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-UT-009/2020 EPI_ISL_508688 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-UT-010/2020 EPI_ISL_508689 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-UT-011/2020 EPI_ISL_508690 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-UT-012/2020 EPI_ISL_508691 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-UT-013/2020 EPI_ISL_508692 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-UT-014/2020 EPI_ISL_508693 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-UT-015/2020 EPI_ISL_508694 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-UT-016/2020 EPI_ISL_508695 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-UT-018/2020 EPI_ISL_508696 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-UT-019/2020 EPI_ISL_508697 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-UT-021/2020 EPI_ISL_508698 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-UT-024/2020 EPI_ISL_508699 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-UT-025/2020 EPI_ISL_508700 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-UT-026/2020 EPI_ISL_508701 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-UT-027/2020 EPI_ISL_508702 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-UT-028/2020 EPI_ISL_508703 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-UT-029/2020 EPI_ISL_508704 division Baden-Wuerttemberg # previously Baden-Württemberg +Germany/BW-2005-cov-001/2020 EPI_ISL_485809 strain Germany/BW-UT-001/2020 +Germany/BW-2005-cov-002/2020 EPI_ISL_485810 strain Germany/BW-UT-002/2020 +Germany/BW-2005-cov-003/2020 EPI_ISL_485811 strain Germany/BW-UT-003/2020 +Germany/BW-2005-cov-004/2020 EPI_ISL_485812 strain Germany/BW-UT-004/2020 +Germany/BW-2005-cov-005/2020 EPI_ISL_485813 strain Germany/BW-UT-005/2020 Ghana/1565_S13/2020 EPI_ISL_422404 location Accra Ghana/1622_S2/2020 EPI_ISL_422384 location Accra Ghana/1651_S3/2020 EPI_ISL_422387 location Accra @@ -14974,6 +15794,8 @@ Greece/34_36284/2020 EPI_ISL_447832 division Athens Greece/50_36277/2020 EPI_ISL_447833 division Athens Greece/54_37163/2020 EPI_ISL_447835 division Athens Greece/55_36015/2020 EPI_ISL_447834 division Athens +Greece/16034_HPI/2020 EPI_ISL_501230 division Central Greece # previously false division Livadeia +Greece/16034_HPI/2020 EPI_ISL_501230 location Livadeia Guam/GU_NHG_01/2020 EPI_ISL_444998 country Guam # whitespace Guam/GU_NHG_01/2020 EPI_ISL_444998 division Guam # whitespace Guam/GU_NHG_02/2020 EPI_ISL_444999 division Guam # whitespace @@ -15275,6 +16097,112 @@ HongKong/XM-PII-S4/2020 EPI_ISL_417443 division Hong Kong HongKong/20-03695/2020 EPI_ISL_450403 country Hong Kong # previously China HongKong/VM20009579/2020 EPI_ISL_450404 country Hong Kong # previously China HongKong/VM2003179/2020 EPI_ISL_450405 country Hong Kong # previously China +HongKong/HKU-200723-001/2020 EPI_ISL_497768 country Hong Kong #previously China +HongKong/HKU-200723-002/2020 EPI_ISL_497769 country Hong Kong #previously China +HongKong/HKU-200723-003/2020 EPI_ISL_497770 country Hong Kong #previously China +HongKong/HKU-200723-004/2020 EPI_ISL_497771 country Hong Kong #previously China +HongKong/HKU-200723-005/2020 EPI_ISL_497772 country Hong Kong #previously China +HongKong/HKU-200723-006/2020 EPI_ISL_497773 country Hong Kong #previously China +HongKong/HKU-200723-007/2020 EPI_ISL_497774 country Hong Kong #previously China +HongKong/HKU-200723-008/2020 EPI_ISL_497775 country Hong Kong #previously China +HongKong/HKU-200723-009/2020 EPI_ISL_497776 country Hong Kong #previously China +HongKong/HKU-200723-010/2020 EPI_ISL_497777 country Hong Kong #previously China +HongKong/HKU-200723-011/2020 EPI_ISL_497778 country Hong Kong #previously China +HongKong/HKU-200723-012/2020 EPI_ISL_497779 country Hong Kong #previously China +HongKong/HKU-200723-013/2020 EPI_ISL_497780 country Hong Kong #previously China +HongKong/HKU-200723-014/2020 EPI_ISL_497781 country Hong Kong #previously China +HongKong/HKU-200723-015/2020 EPI_ISL_497782 country Hong Kong #previously China +HongKong/HKU-200723-016/2020 EPI_ISL_497783 country Hong Kong #previously China +HongKong/HKU-200723-017/2020 EPI_ISL_497784 country Hong Kong #previously China +HongKong/HKU-200723-018/2020 EPI_ISL_497785 country Hong Kong #previously China +HongKong/HKU-200723-019/2020 EPI_ISL_497786 country Hong Kong #previously China +HongKong/HKU-200723-020/2020 EPI_ISL_497787 country Hong Kong #previously China +HongKong/HKU-200723-021/2020 EPI_ISL_497788 country Hong Kong #previously China +HongKong/HKU-200723-022/2020 EPI_ISL_497789 country Hong Kong #previously China +HongKong/HKU-200723-023/2020 EPI_ISL_497790 country Hong Kong #previously China +HongKong/HKU-200723-024/2020 EPI_ISL_497791 country Hong Kong #previously China +HongKong/HKU-200723-025/2020 EPI_ISL_497792 country Hong Kong #previously China +HongKong/HKU-200723-026/2020 EPI_ISL_497793 country Hong Kong #previously China +HongKong/HKU-200723-027/2020 EPI_ISL_497794 country Hong Kong #previously China +HongKong/HKU-200723-028/2020 EPI_ISL_497795 country Hong Kong #previously China +HongKong/HKU-200723-029/2020 EPI_ISL_497796 country Hong Kong #previously China +HongKong/HKU-200723-030/2020 EPI_ISL_497797 country Hong Kong #previously China +HongKong/HKU-200723-031/2020 EPI_ISL_497798 country Hong Kong #previously China +HongKong/HKU-200723-032/2020 EPI_ISL_497799 country Hong Kong #previously China +HongKong/HKU-200723-033/2020 EPI_ISL_497800 country Hong Kong #previously China +HongKong/HKU-200723-034/2020 EPI_ISL_497801 country Hong Kong #previously China +HongKong/HKU-200723-035/2020 EPI_ISL_497802 country Hong Kong #previously China +HongKong/HKU-200723-036/2020 EPI_ISL_497803 country Hong Kong #previously China +HongKong/HKU-200723-037/2020 EPI_ISL_497804 country Hong Kong #previously China +HongKong/HKU-200723-038/2020 EPI_ISL_497805 country Hong Kong #previously China +HongKong/HKU-200723-039/2020 EPI_ISL_497806 country Hong Kong #previously China +HongKong/HKU-200723-040/2020 EPI_ISL_497807 country Hong Kong #previously China +HongKong/HKU-200723-041/2020 EPI_ISL_497808 country Hong Kong #previously China +HongKong/HKU-200723-042/2020 EPI_ISL_497809 country Hong Kong #previously China +HongKong/HKU-200723-043/2020 EPI_ISL_497810 country Hong Kong #previously China +HongKong/HKU-200723-044/2020 EPI_ISL_497811 country Hong Kong #previously China +HongKong/HKU-200723-045/2020 EPI_ISL_497812 country Hong Kong #previously China +HongKong/HKU-200723-046/2020 EPI_ISL_497813 country Hong Kong #previously China +HongKong/HKU-200723-047/2020 EPI_ISL_497814 country Hong Kong #previously China +HongKong/HKU-200723-048/2020 EPI_ISL_497815 country Hong Kong #previously China +HongKong/HKU-200723-049/2020 EPI_ISL_497816 country Hong Kong #previously China +HongKong/HKU-200723-050/2020 EPI_ISL_497817 country Hong Kong #previously China +HongKong/HKU-200723-051/2020 EPI_ISL_497818 country Hong Kong #previously China +HongKong/HKU-200723-052/2020 EPI_ISL_497819 country Hong Kong #previously China +HongKong/HKU-200723-053/2020 EPI_ISL_497820 country Hong Kong #previously China +HongKong/HKU-200723-054/2020 EPI_ISL_497821 country Hong Kong #previously China +HongKong/HKU-200723-055/2020 EPI_ISL_497822 country Hong Kong #previously China +HongKong/HKU-200723-056/2020 EPI_ISL_497823 country Hong Kong #previously China +HongKong/HKU-200723-057/2020 EPI_ISL_497824 country Hong Kong #previously China +HongKong/HKU-200723-058/2020 EPI_ISL_497825 country Hong Kong #previously China +HongKong/HKU-200723-059/2020 EPI_ISL_497826 country Hong Kong #previously China +HongKong/HKU-200723-060/2020 EPI_ISL_497827 country Hong Kong #previously China +HongKong/HKU-200723-061/2020 EPI_ISL_497828 country Hong Kong #previously China +HongKong/HKU-200723-062/2020 EPI_ISL_497829 country Hong Kong #previously China +HongKong/HKU-200723-063/2020 EPI_ISL_497830 country Hong Kong #previously China +HongKong/HKU-200723-064/2020 EPI_ISL_497831 country Hong Kong #previously China +HongKong/HKU-200723-065/2020 EPI_ISL_497832 country Hong Kong #previously China +HongKong/HKU-200723-066/2020 EPI_ISL_497833 country Hong Kong #previously China +HongKong/HKU-200723-067/2020 EPI_ISL_497834 country Hong Kong #previously China +HongKong/HKU-200723-068/2020 EPI_ISL_497835 country Hong Kong #previously China +HongKong/HKU-200723-069/2020 EPI_ISL_497836 country Hong Kong #previously China +HongKong/HKU-200723-070/2020 EPI_ISL_497837 country Hong Kong #previously China +HongKong/HKU-200723-071/2020 EPI_ISL_497838 country Hong Kong #previously China +HongKong/HKU-200723-072/2020 EPI_ISL_497839 country Hong Kong #previously China +HongKong/HKU-200723-073/2020 EPI_ISL_497840 country Hong Kong #previously China +HongKong/HKU-200723-074/2020 EPI_ISL_497841 country Hong Kong #previously China +HongKong/HKU-200723-075/2020 EPI_ISL_497842 country Hong Kong #previously China +HongKong/HKU-200723-076/2020 EPI_ISL_497843 country Hong Kong #previously China +HongKong/HKU-200723-077/2020 EPI_ISL_497844 country Hong Kong #previously China +HongKong/HKU-200723-078/2020 EPI_ISL_497845 country Hong Kong #previously China +HongKong/HKU-200723-079/2020 EPI_ISL_497846 country Hong Kong #previously China +HongKong/HKU-200723-080/2020 EPI_ISL_497847 country Hong Kong #previously China +HongKong/HKU-200723-081/2020 EPI_ISL_497848 country Hong Kong #previously China +HongKong/HKU-200723-082/2020 EPI_ISL_497849 country Hong Kong #previously China +HongKong/HKU-200723-083/2020 EPI_ISL_497850 country Hong Kong #previously China +HongKong/HKU-200723-084/2020 EPI_ISL_497851 country Hong Kong #previously China +HongKong/HKU-200723-085/2020 EPI_ISL_497852 country Hong Kong #previously China +HongKong/HKU-200723-086/2020 EPI_ISL_497853 country Hong Kong #previously China +HongKong/HKU-200723-087/2020 EPI_ISL_497854 country Hong Kong #previously China +HongKong/HKU-200723-088/2020 EPI_ISL_497855 country Hong Kong #previously China +HongKong/HKU-200723-089/2020 EPI_ISL_497856 country Hong Kong #previously China +HongKong/HKU-200723-090/2020 EPI_ISL_497857 country Hong Kong #previously China +HongKong/HKU-200723-091/2020 EPI_ISL_497858 country Hong Kong #previously China +HongKong/HKU-200723-092/2020 EPI_ISL_497859 country Hong Kong #previously China +HongKong/HKU-200723-093/2020 EPI_ISL_497860 country Hong Kong #previously China +HongKong/HKU-200723-094/2020 EPI_ISL_497861 country Hong Kong #previously China +HongKong/HKU-200723-095/2020 EPI_ISL_497862 country Hong Kong #previously China +HongKong/HKU-200723-096/2020 EPI_ISL_497863 country Hong Kong #previously China +HongKong/HKU-200723-097/2020 EPI_ISL_497864 country Hong Kong #previously China +HongKong/HKU-200723-098/2020 EPI_ISL_497865 country Hong Kong #previously China +HongKong/HKU-200723-099/2020 EPI_ISL_497866 country Hong Kong #previously China +HongKong/HKU-200723-100/2020 EPI_ISL_497867 country Hong Kong #previously China +HongKong/HKU-200723-101/2020 EPI_ISL_497868 country Hong Kong #previously China +HongKong/HKU-200723-102/2020 EPI_ISL_497869 country Hong Kong #previously China +HongKong/HKU-200723-103/2020 EPI_ISL_497870 country Hong Kong #previously China +HongKong/HKU-200723-104/2020 EPI_ISL_498269 country Hong Kong #previously China +HongKong/HKU-200723-105/2020 EPI_ISL_498270 country Hong Kong #previously China +HongKong/HKU-200723-106/2020 EPI_ISL_498271 country Hong Kong #previously China Hungary/mbl1/2020 EPI_ISL_416426 location Budapest Hungary/mbl1/2020 EPI_ISL_416426 division Central Hungary Hungary/MBL-002/2020 EPI_ISL_435420 location Budapest @@ -15799,7 +16727,7 @@ Iceland/60/2020 EPI_ISL_417760 division_exposure Austria # GISAID Iceland/60/2020 EPI_ISL_417760 region_exposure Europe # GISAID Iceland/60/2020 EPI_ISL_417760 country_exposure Austria # GISAID Iceland/602/2020 EPI_ISL_424622 division_exposure Faroe Islands #GISAID -Iceland/602/2020 EPI_ISL_424622 country_exposure United Kingdom #GISAID +Iceland/602/2020 EPI_ISL_424622 country_exposure Denmark #GISAID Iceland/602/2020 EPI_ISL_424622 region_exposure Europe #GISAID Iceland/63/2020 EPI_ISL_417855 division_exposure Austria # GISAID Iceland/63/2020 EPI_ISL_417855 country_exposure Austria # GISAID @@ -16178,6 +17106,13 @@ India/S7/2020 EPI_ISL_455641 division West Bengal India/S9/2020 EPI_ISL_455642 division West Bengal India/5416/2020 EPI_ISL_490013 division Uttar Pradesh # previously false division Lucknow India/5416/2020 EPI_ISL_490013 location Lucknow +India/S93/2020 EPI_ISL_508482 location Hooghly # previously Hoogly +India/TF17/2020 EPI_ISL_508495 location Tughlakabad # previously Tuklakabad +India/NCDC-02310/2020 EPI_ISL_435085 division Maharashtra # previously false division Mumbai +India/NCDC-02310/2020 EPI_ISL_435085 location Mumbai +India/NCDC-02315/2020 EPI_ISL_435086 division Maharashtra # previously false division Mumbai +India/NCDC-02315/2020 EPI_ISL_435086 location Mumbai +India/MW24/2020 EPI_ISL_508428 location Aligarh # previously Kalwa Iran/KHGRC-3-2178/2020 EPI_ISL_445088 division Iran # whitespace Iran/KHGRC-3-2178/2020 EPI_ISL_445088 country Iran # whitespace Italy/BG-11639-28Feb/2020 EPI_ISL_460080 division Lombardy @@ -16229,6 +17164,15 @@ Italy/INMI9/2020 EPI_ISL_424343 location Rome Italy/INMI9/2020 EPI_ISL_424343 division Lazio # previously Rome Italy/TE5166/2020 EPI_ISL_420563 location Teramo Italy/TE5166/2020 EPI_ISL_420563 division Abruzzo # previously Teramo +Italy/NegrarVR_1/2020 EPI_ISL_492980 location Verona IT # previously Verona +Italy/NegrarVR_2/2020 EPI_ISL_492981 location Verona IT # previously Verona +Italy/NegrarVR_3/2020 EPI_ISL_492982 location Verona IT # previously Verona +Italy/NegrarVR_4/2020 EPI_ISL_492983 location Verona IT # previously Verona +Italy/NegrarVR_5/2020 EPI_ISL_492984 location Verona IT # previously Verona +Italy/NegrarVR_6/2020 EPI_ISL_492985 location Verona IT # previously Verona +Italy/NegrarVR_7/2020 EPI_ISL_492986 location Verona IT # previously Verona +Italy/NegrarVR_8/2020 EPI_ISL_492987 location Verona IT # previously Verona +Italy/NegrarVR_9/2020 EPI_ISL_496482 location Verona IT # previously Verona Italy/VR_20COV21-26/2020 EPI_ISL_422437 location Verona IT Italy/VR_20COV21-37/2020 EPI_ISL_422438 location Verona IT Italy/VR_20COV10-41/2020 EPI_ISL_452181 location Verona IT @@ -16266,6 +17210,10 @@ Italy/IZSPB_813/2020 EPI_ISL_469021 location Lecce Italy/IZSPB_847/2020 EPI_ISL_469022 location Lecce Italy/IZSPB_857/2020 EPI_ISL_469023 location Brindisi Italy/IZSPB_990/2020 EPI_ISL_469050 location Lecce +Italy/IZSM-32798-45/2020 EPI_ISL_493332 division Campania # previously false division Benevento +Italy/IZSM-32798-45/2020 EPI_ISL_493332 location Benevento +Italy/IZSM-32803-66/2020 EPI_ISL_493333 division Campania # previously false division Benevento +Italy/IZSM-32803-66/2020 EPI_ISL_493333 location Benevento Israel/CVL-n-11468/2020 EPI_ISL_474985 division Kiryat Gat Israel/CVL-n-11475/2020 EPI_ISL_474972 division Beni Brak Israel/CVL-n-11482/2020 EPI_ISL_474967 division Beni Brak @@ -16456,6 +17404,9 @@ Kuwait/KU18/2020 EPI_ISL_416543 location Dasman Kuwait/KU18/2020 EPI_ISL_416543 division Kuwait Latvia/010/2020 EPI_ISL_437089 country Latvia Latvia/010/2020 EPI_ISL_437089 division Latvia +Latvia/test1/2020 EPI_ISL_498226 region Europe +Latvia/test1/2020 EPI_ISL_498226 country Latvia +Latvia/test1/2020 EPI_ISL_498226 division Latvia Lebanon/S4_761/2020 EPI_ISL_450511 country_exposure United Kingdom Lebanon/S9_764/2020 EPI_ISL_450515 country_exposure United Kingdom Lebanon/S4_761/2020 EPI_ISL_450511 division_exposure United Kingdom @@ -16587,6 +17538,13 @@ Luxembourg/Lux1/2020 EPI_ISL_413593 division Luxembourg Luxembourg/Lux1/2020 EPI_ISL_413593 division_exposure Italy #Travel history to Italy for first case in Luexembourg, which this must be based on collection date (https://www.pharmaceutical-technology.com/news/coronavirus-a-timeline-of-how-the-deadly-outbreak-evolved/) Luxembourg/Lux1/2020 EPI_ISL_413593 region_exposure Europe #Travel history to Italy for first case in Luexembourg, which this must be based on collection date (https://www.pharmaceutical-technology.com/news/coronavirus-a-timeline-of-how-the-deadly-outbreak-evolved/) Luxembourg/Lux1/2020 EPI_ISL_413593 country_exposure Italy #Travel history to Italy for first case in Luexembourg, which this must be based on collection date (https://www.pharmaceutical-technology.com/news/coronavirus-a-timeline-of-how-the-deadly-outbreak-evolved/) +Madagascar/IP-01650/2020 EPI_ISL_508862 region_exposure Europe +Madagascar/IP-01650/2020 EPI_ISL_508862 country_exposure France +Madagascar/IP-01650/2020 EPI_ISL_508862 division_exposure France +Madagascar/IP-01861/2020 EPI_ISL_508863 division Analanjirofo +Madagascar/IP-01861/2020 EPI_ISL_508863 region_exposure Europe +Madagascar/IP-01861/2020 EPI_ISL_508863 country_exposure France +Madagascar/IP-01861/2020 EPI_ISL_508863 division_exposure France Malaysia/IMR_WC1097/2020 EPI_ISL_430441 country Malaysia Malaysia/IMR_WC1097/2020 EPI_ISL_430441 region Asia Mexico/CDMX-InDRE_01/2020 EPI_ISL_412972 country_exposure Italy # GISAID @@ -16595,10 +17553,12 @@ Mexico/CDMX-InDRE_01/2020 EPI_ISL_412972 region_exposure Europe # GISAID Mexico/CDMX-InDRE_06/2020 EPI_ISL_424673 division Mexico City Mexico/Chiapas-InDRE_02/2020 EPI_ISL_424666 region North America Mexico/EdoMex-InDRE_03/2020 EPI_ISL_424667 region North America +Mexico/EdoMex-InDRE_07/2020 EPI_ISL_452139 division Estado de Mexico # previously Edomex Mexico/CDMX-InDRE_07/2020 EPI_ISL_452139 region_exposure Europe Mexico/CDMX-InDRE_07/2020 EPI_ISL_452139 country_exposure Italy Mexico/CDMX-InDRE_07/2020 EPI_ISL_452139 division_exposure Lombardy -Mexico/CDMX-InDRE_07/2020 EPI_ISL_452139 location_exposure Bergamo +Mexico/CDMX-InDRE_07/2020 EPI_ISL_452139 location_exposure Bergamo # Patient infected in Bergamo, Italy between February 16-22, 2020 +Mexico/EdoMex-InDRE_08/2020 EPI_ISL_452141 division Estado de Mexico # previously Edomex Mexico/CDMX-InDRE_08/2020 EPI_ISL_452141 region_exposure Europe Mexico/CDMX-InDRE_08/2020 EPI_ISL_452141 country_exposure Italy Mexico/CDMX-InDRE_08/2020 EPI_ISL_452141 division_exposure Italy @@ -16611,6 +17571,10 @@ Mexico/CDMX-InDRE_11/2020 EPI_ISL_455435 division_exposure Guadalajara Mexico/CDMX-InDRE_12/2020 EPI_ISL_455436 division Mexico City # previously CDMX Mexico/CDMX-InDRE_13/2020 EPI_ISL_455437 division Mexico City # previously CDMX Mexico/CDMX-InDRE_15/2020 EPI_ISL_455439 division Mexico City # previously CDMX +Mexico/InDRE_25/2020 EPI_ISL_493340 division Baja California Sur # previously Bcs +Mexico/InDRE_30/2020 EPI_ISL_493345 division Baja California Sur # previously Bcs +Mexico/InDRE_31/2020 EPI_ISL_493346 division Baja California Sur # previously Bcs +Mexico/InDRE_32/2020 EPI_ISL_493347 division Baja California # previously Bc Morocco/COV001884/2020 EPI_ISL_452463 country Spain Morocco/COV001884/2020 EPI_ISL_452463 location Cadizs Morocco/6887/2020 EPI_ISL_459965 division Morocco @@ -17223,6 +18187,452 @@ Panama/328677/2020 EPI_ISL_415152 division Panama City Panama/328677/2020 EPI_ISL_415152 division_exposure Comunitat Valenciana Panama/328677/2020 EPI_ISL_415152 region North America Panama/328677/2020 EPI_ISL_415152 region_exposure Europe +Panama/328688/2020 EPI_ISL_496603 region North America # previously Central America +Panama/328733/2020 EPI_ISL_496611 region North America # previously Central America +Panama/328844/2020 EPI_ISL_496613 region North America # previously Central America +Panama/328848/2020 EPI_ISL_496614 region North America # previously Central America +Panama/328971/2020 EPI_ISL_496619 region North America # previously Central America +Panama/328971/2020 EPI_ISL_496619 country_exposure USA +Panama/328971/2020 EPI_ISL_496619 division_exposure USA +Panama/329728/2020 EPI_ISL_496646 region North America # previously Central America +Panama/329730/2020 EPI_ISL_496647 region North America # previously Central America +Panama/330775/2020 EPI_ISL_496673 region North America # previously Central America +Panama/328706/2020 EPI_ISL_496604 region North America # previously Central America +Panama/328706/2020 EPI_ISL_496604 region_exposure Europe +Panama/328706/2020 EPI_ISL_496604 country_exposure Spain +Panama/328706/2020 EPI_ISL_496604 division_exposure Spain +Panama/329667/2020 EPI_ISL_496640 region North America # previously Central America +Panama/329916/2020 EPI_ISL_496656 region North America # previously Central America +Panama/331336/2020 EPI_ISL_496683 region North America # previously Central America +Panama/332875/2020 EPI_ISL_496729 region North America # previously Central America +Panama/328709/2020 EPI_ISL_496605 region North America # previously Central America +Panama/328723/2020 EPI_ISL_496609 region North America # previously Central America +Panama/329868/2020 EPI_ISL_496652 region North America # previously Central America +Panama/330779/2020 EPI_ISL_496674 region North America # previously Central America +Panama/330961/2020 EPI_ISL_496677 region North America # previously Central America +Panama/331025/2020 EPI_ISL_496678 region North America # previously Central America +Panama/331836/2020 EPI_ISL_496694 region North America # previously Central America +Panama/328710/2020 EPI_ISL_496606 region North America # previously Central America +Panama/330558/2020 EPI_ISL_496668 region North America # previously Central America +Panama/330817/2020 EPI_ISL_496676 region North America # previously Central America +Panama/332033/2020 EPI_ISL_496702 region North America # previously Central America +Panama/332352/2020 EPI_ISL_496710 region North America # previously Central America +Panama/328719/2020 EPI_ISL_496607 region North America # previously Central America +Panama/328721/2020 EPI_ISL_496608 region North America # previously Central America +Panama/328721/2020 EPI_ISL_496608 country_exposure USA +Panama/328721/2020 EPI_ISL_496608 division_exposure USA +Panama/329655/2020 EPI_ISL_496639 region North America # previously Central America +Panama/331596/2020 EPI_ISL_496689 region North America # previously Central America +Panama/332469/2020 EPI_ISL_496712 region North America # previously Central America +Panama/332692/2020 EPI_ISL_496717 region North America # previously Central America +Panama/332791/2020 EPI_ISL_496722 region North America # previously Central America +Panama/328726/2020 EPI_ISL_496610 region North America # previously Central America +Panama/328726/2020 EPI_ISL_496610 country_exposure USA +Panama/328726/2020 EPI_ISL_496610 division_exposure USA +Panama/328941/2020 EPI_ISL_496617 region North America # previously Central America +Panama/328941/2020 EPI_ISL_496617 country_exposure USA +Panama/328941/2020 EPI_ISL_496617 division_exposure USA +Panama/328944/2020 EPI_ISL_496618 region North America # previously Central America +Panama/328944/2020 EPI_ISL_496618 country_exposure USA +Panama/328944/2020 EPI_ISL_496618 division_exposure USA +Panama/329844/2020 EPI_ISL_496650 region North America # previously Central America +Panama/331872/2020 EPI_ISL_496696 region North America # previously Central America +Panama/332013/2020 EPI_ISL_496701 region North America # previously Central America +Panama/333048/2020 EPI_ISL_496730 region North America # previously Central America +Panama/333063/2020 EPI_ISL_496731 region North America # previously Central America +Panama/333517/2020 EPI_ISL_496745 region North America # previously Central America +Panama/328774/2020 EPI_ISL_496612 region North America # previously Central America +Panama/329198/2020 EPI_ISL_496626 region North America # previously Central America +Panama/329198/2020 EPI_ISL_496626 region_exposure Europe +Panama/329198/2020 EPI_ISL_496626 country_exposure Germany +Panama/329198/2020 EPI_ISL_496626 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division Panama Oeste # previously Panama West +Panama/334115/2020 EPI_ISL_496765 division Panama Oeste # previously Panama West +Panama/334117/2020 EPI_ISL_496766 division Panama Oeste # previously Panama West +Panama/334277/2020 EPI_ISL_496771 division Panama Oeste # previously Panama West +Panama/334333/2020 EPI_ISL_496774 division Panama Oeste # previously Panama West +Panama/334400/2020 EPI_ISL_496778 division Panama Oeste # previously Panama West +Panama/334440/2020 EPI_ISL_496779 division Panama Oeste # previously Panama West +Panama/334658/2020 EPI_ISL_496791 division Panama Oeste # previously Panama West +Panama/334845/2020 EPI_ISL_496795 division Panama Oeste # previously Panama West +Panama/335002/2020 EPI_ISL_496800 division Panama Oeste # previously Panama West +Panama/335119/2020 EPI_ISL_496806 division Panama Oeste # previously Panama West +Panama/335403/2020 EPI_ISL_496811 division Panama Oeste # previously Panama West +Panama/335546/2020 EPI_ISL_496815 division Panama Oeste # previously Panama West +Panama/335572/2020 EPI_ISL_496817 division Panama Oeste # previously Panama West +Panama/335859/2020 EPI_ISL_496821 division Panama Oeste # previously Panama West +Panama/335862/2020 EPI_ISL_496822 division Panama Oeste # previously Panama West +Panama/335941/2020 EPI_ISL_496829 division Panama Oeste # previously Panama West +Panama/336008/2020 EPI_ISL_496833 division Panama Oeste # previously Panama West +Panama/336377/2020 EPI_ISL_496844 division Panama Oeste # previously Panama West +Panama/336567/2020 EPI_ISL_496853 division Panama Oeste # previously Panama West +Panama/337467/2020 EPI_ISL_496861 division Panama Oeste # previously Panama West +Panama/337660/2020 EPI_ISL_496863 division Panama Oeste # previously Panama West +Panama/337668/2020 EPI_ISL_496864 division Panama Oeste # previously Panama West +Panama/337884/2020 EPI_ISL_496865 division Panama Oeste # previously Panama West +Panama/338477/2020 EPI_ISL_496869 division Panama Oeste # previously Panama West +Panama/338698/2020 EPI_ISL_496882 division Panama Oeste # previously Panama West +Panama/339467/2020 EPI_ISL_496894 division Panama Oeste # previously Panama West +Panama/340172/2020 EPI_ISL_496902 division Panama Oeste # previously Panama West +Panama/340836/2020 EPI_ISL_496906 division Panama Oeste # previously Panama West +Panama/340837/2020 EPI_ISL_496907 division Panama Oeste # previously Panama West +Panama/330754/2020 EPI_ISL_496671 division Panama Oeste # previously Panama West +Panama/331186/2020 EPI_ISL_496681 division Panama Oeste # previously Panama West +Panama/331837/2020 EPI_ISL_496695 division Panama Oeste # previously Panama West +Panama/331943/2020 EPI_ISL_496698 division Panama Oeste # previously Panama West +Panama/329547/2020 EPI_ISL_496633 division Santiago de Veraguas # previously Santiago +Panama/329682/2020 EPI_ISL_496642 division Santiago de Veraguas # previously Santiago +Panama/329877/2020 EPI_ISL_496653 division Santiago de Veraguas # previously Santiago +Panama/329879/2020 EPI_ISL_496654 division Santiago de Veraguas # previously Santiago +Panama/332718/2020 EPI_ISL_496719 division Santiago de Veraguas # previously Santiago +Panama/335382/2020 EPI_ISL_496810 division Santiago de Veraguas # previously Santiago +Panama/331540/2020 EPI_ISL_496686 location Santa Ana PA # previously Santa Ana +Panama/331789/2020 EPI_ISL_496692 location Santa Ana PA # previously Santa Ana +Panama/331997/2020 EPI_ISL_496700 location Santa Ana PA # previously Santa Ana +Panama/332810/2020 EPI_ISL_496724 location Santa Ana PA # previously Santa Ana +Panama/333177/2020 EPI_ISL_496733 location Santa Ana PA # previously Santa Ana +Panama/334000/2020 EPI_ISL_496758 location Santa Ana PA # previously Santa Ana +Panama/328688/2020 EPI_ISL_496603 location San Francisco PA # previously San Francisco +Panama/328688/2020 EPI_ISL_496603 country_exposure USA +Panama/328688/2020 EPI_ISL_496603 division_exposure USA +Panama/328733/2020 EPI_ISL_496611 location San Francisco PA # previously San Francisco +Panama/328733/2020 EPI_ISL_496611 country_exposure USA +Panama/328733/2020 EPI_ISL_496611 division_exposure USA +Panama/328844/2020 EPI_ISL_496613 location San Francisco PA # previously San Francisco +Panama/328844/2020 EPI_ISL_496613 region_exposure Europe +Panama/328844/2020 EPI_ISL_496613 country_exposure Spain +Panama/328844/2020 EPI_ISL_496613 division_exposure Spain +Panama/328848/2020 EPI_ISL_496614 location San Francisco PA # previously San Francisco +Panama/328848/2020 EPI_ISL_496614 region_exposure Europe +Panama/328848/2020 EPI_ISL_496614 country_exposure Europe +Panama/328848/2020 EPI_ISL_496614 division_exposure Europe +Panama/328971/2020 EPI_ISL_496619 location San Francisco PA # previously San Francisco +Panama/329728/2020 EPI_ISL_496646 location San Francisco PA # previously San Francisco +Panama/329730/2020 EPI_ISL_496647 location San Francisco PA # previously San Francisco +Panama/330775/2020 EPI_ISL_496673 location San Francisco PA # previously San Francisco Philippines/PH-RITM-0009/2020 EPI_ISL_491465 division National Capital Region # previously Ncr Philippines/PH-RITM-0010/2020 EPI_ISL_491466 division National Capital Region # previously Ncr Philippines/PH-RITM-0011/2020 EPI_ISL_491467 division National Capital Region # previously Ncr @@ -17277,6 +18687,23 @@ Poland/Pom8/2020 EPI_ISL_451649 division Pomorskie # previously Pomorze Poland/Pom9/2020 EPI_ISL_451650 division Pomorskie # previously Pomorze Poland/Wro-01/2020 EPI_ISL_435723 originating_lab Laboratory of Genomics & Bioinformatics, Institute of Immunology and Experimental Therapy, Polish Academy of Sciences Oddzia Mikrobiologii Wojewodzkiej Stacji Sanitarno Epidemiologiczna Poland/Wro-02/2020 EPI_ISL_437625 division Dolnoslaskie +Poland/A_348r/2020 EPI_ISL_509017 division Łódzkie # previously Lodzkie +Poland/B_348r/2020 EPI_ISL_509018 division Łódzkie # previously Lodzkie +Poland/D_348r/2020 EPI_ISL_509019 division Łódzkie # previously Lodzkie +Poland/E_348r/2020 EPI_ISL_509020 division Łódzkie # previously Lodzkie +Poland/G_348r/2020 EPI_ISL_509022 division Łódzkie # previously Lodzkie +Poland/I_348r/2020 EPI_ISL_509024 division Łódzkie # previously Lodzkie +Poland/J_348r/2020 EPI_ISL_509026 division Łódzkie # previously Lodzkie +Poland/K_348r/2020 EPI_ISL_509028 division Łódzkie # previously Lodzkie +Poland/L_348r/2020 EPI_ISL_509029 division Łódzkie # previously Lodzkie +Poland/F_348r/2020 EPI_ISL_509021 division Łódzkie # previously Lodzkie +Poland/H_348r/2020 EPI_ISL_509023 division Łódzkie # previously Lodzkie +Poland/S_348r/2020 EPI_ISL_509037 division Łódzkie # previously Lodzkie +Poland/W_348r/2020 EPI_ISL_509038 division Łódzkie # previously Lodzkie +Poland/X_348r/2020 EPI_ISL_509051 division Łódzkie # previously Lodzkie +Poland/M_348r/2020 EPI_ISL_509031 division Łódzkie # previously Lodzkie +Poland/O_348r/2020 EPI_ISL_509033 division Łódzkie # previously Lodzkie +Poland/P_348r/2020 EPI_ISL_509035 division Łódzkie # previously Lodzkie Portugal/CV62/2020 EPI_ISL_413647 division Portugal Portugal/CV62/2020 EPI_ISL_413647 division_exposure Italy #Travel association (Italy, Germany) (GISAID) and clusters with other seqs with Italy travel history on nextstrain Portugal/CV62/2020 EPI_ISL_413647 country_exposure Italy #Travel association (Italy, Germany) (GISAID) and clusters with other seqs with Italy travel history on nextstrain @@ -17569,6 +18996,18 @@ Portugal/R835/2020 EPI_ISL_491296 location Santa Maria dos Olivais Portugal/R835/2020 EPI_ISL_491296 division Lisbon Portugal/R998/2020 EPI_ISL_491297 location Massama Portugal/R998/2020 EPI_ISL_491297 division Lisbon +Portugal/IGC2988/2020 EPI_ISL_491178 location Amadora # previously Mina da Agua +Portugal/IGC3628/2020 EPI_ISL_491195 location Amadora # previously Mina da Agua +Portugal/IGC3629/2020 EPI_ISL_491196 location Amadora # previously Mina da Agua +Portugal/IGC3640/2020 EPI_ISL_491198 location Amadora # previously Mina da Agua +Portugal/IGC3991/2020 EPI_ISL_491214 location Amadora # previously Mina da Agua +Portugal/IGC4016/2020 EPI_ISL_491222 location Amadora # previously Mina da Agua +Portugal/IGC4124/2020 EPI_ISL_491235 location Amadora # previously Mina da Agua +Portugal/IGC4250/2020 EPI_ISL_491241 location Amadora # previously Mina da Agua +Portugal/IGC4479/2020 EPI_ISL_491259 location Amadora # previously Mina da Agua +Portugal/R1237/2020 EPI_ISL_491271 location Amadora # previously Mina da Agua +Portugal/R359/2020 EPI_ISL_491286 location Amadora # previously Mina da Agua +Portugal/R440/2020 EPI_ISL_491288 location Amadora # previously Mina da Agua PuertoRico/CDC-S1/2020 EPI_ISL_434541 division Puerto Rico PuertoRico/CDC-S1/2020 EPI_ISL_434541 region North America PuertoRico/CDC-S10/2020 EPI_ISL_434550 division Puerto Rico @@ -17622,6 +19061,7 @@ Romania/Bucuresti-6451/2020 EPI_ISL_468145 division Bucharest Romania/Valcea/2020 EPI_ISL_471424 region Europe Russia/Kipen-RII6907V/2020 EPI_ISL_450246 division Leningrad Region Russia/Moscow-GCBL2/2020 EPI_ISL_436716 division Moscow +Russia/Novosibirsk-84101/2020 EPI_ISL_428918 division Novosibirsk Oblast # previously Novosibirsk Region Russia/Sakha-89702/2020 EPI_ISL_428907 division Republic of Sakha Russia/StPetersburg-3524/2020 EPI_ISL_415710 division Saint-Petersburg Russia/StPetersburg-64304/2020 EPI_ISL_428868 division Saint-Petersburg @@ -17675,6 +19115,79 @@ Russia/StPetersburg-RII6061S/2020 EPI_ISL_430108 division Saint-Petersburg Russia/StPetersburg-RII6063S/2020 EPI_ISL_430109 division Saint-Petersburg Russia/StPetersburg-RII6065S/2020 EPI_ISL_430110 division Saint-Petersburg Russia/StPetersburg-RII6086S/2020 EPI_ISL_430111 division Saint-Petersburg +Russia/StPetersburg-RII10066V/2020 EPI_ISL_507224 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII10128S/2020 EPI_ISL_507225 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII10183S/2020 EPI_ISL_507226 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII10219S/2020 EPI_ISL_507227 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII10223S/2020 EPI_ISL_507228 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII10261S/2020 EPI_ISL_507229 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII10289S/2020 EPI_ISL_507230 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11126S/2020 EPI_ISL_507231 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11142S/2020 EPI_ISL_507232 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11144S/2020 EPI_ISL_507233 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11149S/2020 EPI_ISL_507234 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11149V/2020 EPI_ISL_507235 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11151S/2020 EPI_ISL_507236 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11153S/2020 EPI_ISL_507237 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11155S/2020 EPI_ISL_507238 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11164S/2020 EPI_ISL_507239 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11168S/2020 EPI_ISL_507240 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11172S/2020 EPI_ISL_507241 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11183S/2020 EPI_ISL_507242 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11184S/2020 EPI_ISL_507243 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11188S/2020 EPI_ISL_507244 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11247S/2020 EPI_ISL_507245 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11250S/2020 EPI_ISL_507246 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11251S/2020 EPI_ISL_507247 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11256S/2020 EPI_ISL_507248 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11271S/2020 EPI_ISL_507249 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11273S/2020 EPI_ISL_507250 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11275S/2020 EPI_ISL_507251 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11292S/2020 EPI_ISL_507252 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11299S/2020 EPI_ISL_507253 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11306S/2020 EPI_ISL_507254 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII11311S/2020 EPI_ISL_507255 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII13532S/2020 EPI_ISL_507256 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII14570V/2020 EPI_ISL_507257 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII14691V/2020 EPI_ISL_507258 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15065S/2020 EPI_ISL_507259 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15163S/2020 EPI_ISL_507260 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15221S/2020 EPI_ISL_507261 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15228S/2020 EPI_ISL_507262 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15229S/2020 EPI_ISL_507263 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15231S/2020 EPI_ISL_507264 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15516S/2020 EPI_ISL_507265 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15517S/2020 EPI_ISL_507266 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15518S/2020 EPI_ISL_507267 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15520S/2020 EPI_ISL_507268 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15671S/2020 EPI_ISL_507269 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15673S/2020 EPI_ISL_507270 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15674S/2020 EPI_ISL_507271 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15675S/2020 EPI_ISL_507272 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15817S/2020 EPI_ISL_507273 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15932V/2020 EPI_ISL_507274 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15933S/2020 EPI_ISL_507275 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII15950V/2020 EPI_ISL_507276 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII16106S/2020 EPI_ISL_507277 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII17536S/2020 EPI_ISL_507278 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII17574S/2020 EPI_ISL_507279 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII17940S/2020 EPI_ISL_507280 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII17941S/2020 EPI_ISL_507281 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII17948S/2020 EPI_ISL_507282 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII17949S/2020 EPI_ISL_507283 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII18088S/2020 EPI_ISL_507284 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII18089S/2020 EPI_ISL_507285 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII18090S/2020 EPI_ISL_507286 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII21538S/2020 EPI_ISL_507287 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII21769S/2020 EPI_ISL_507288 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII21797S/2020 EPI_ISL_507289 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII21802S/2020 EPI_ISL_507290 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII3524VR4/2020 EPI_ISL_507291 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII4586S/2020 EPI_ISL_507292 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII8317V/2020 EPI_ISL_507293 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII8319V/2020 EPI_ISL_507294 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII9304V/2020 EPI_ISL_507295 division Saint-Petersburg # previously Saint Petersburg +Russia/StPetersburg-RII9364V/2020 EPI_ISL_507296 division Saint-Petersburg # previously Saint Petersburg Russia/SCPM-O-01/2020 EPI_ISL_451963 region Europe Russia/SCPM-O-02/2020 EPI_ISL_451964 region Europe Russia/SCPM-O-03/2020 EPI_ISL_451965 region Europe @@ -22592,6 +24105,16 @@ Senegal/6597/2020 EPI_ISL_486870 division Dakar # previously false division Mbao Senegal/6597/2020 EPI_ISL_486870 location Mbao Senegal/9615/2020 EPI_ISL_486860 division Dakar # previously false division Sangalkam Senegal/9615/2020 EPI_ISL_486860 location Sangalkam +Senegal/52357/2020 EPI_ISL_498240 division Dakar # previously false division Mbao +Senegal/52357/2020 EPI_ISL_498240 location Mbao +Senegal/63129/2020 EPI_ISL_498248 division Dakar # previously false division Mbao +Senegal/63129/2020 EPI_ISL_498248 location Mbao +Senegal/6914/2020 EPI_ISL_498237 division Dakar # previously false division Guediawaye +Senegal/6914/2020 EPI_ISL_498237 location Guediawaye +Senegal/6934/2020 EPI_ISL_498235 division Dakar # previously false division Yeumbeul +Senegal/6934/2020 EPI_ISL_498235 location Yeumbeul +Senegal/9840/2020 EPI_ISL_498234 division Dakar # previously false division Pikine +Senegal/9840/2020 EPI_ISL_498234 location Pikine Shanghai/SH01/2020 EPI_ISL_414510 genbank_accession MT121215 Shenzhen/HKU-SZ-002/2020 EPI_ISL_406030 genbank_accession MN938384 Shenzhen/HKU-SZ-005/2020 EPI_ISL_405839 genbank_accession MN975262 @@ -22821,8 +24344,11 @@ SouthAfrica/KRISP-0190/2020 EPI_ISL_482709 division KwaZulu-Natal SouthAfrica/KRISP-0191/2020 EPI_ISL_482710 division KwaZulu-Natal SouthAfrica/KRISP-0192/2020 EPI_ISL_482711 division KwaZulu-Natal SouthAfrica/KRISP-0193/2020 EPI_ISL_482848 division KwaZulu-Natal +SouthAfrica/KRISP-0193/2020 EPI_ISL_482848 location SouthAfrica/KRISP-0194/2020 EPI_ISL_482849 division KwaZulu-Natal +SouthAfrica/KRISP-0194/2020 EPI_ISL_482849 location SouthAfrica/KRISP-0195/2020 EPI_ISL_482850 division KwaZulu-Natal +SouthAfrica/KRISP-0195/2020 EPI_ISL_482850 location SouthAfrica/KRISP-0196/2020 EPI_ISL_482712 division KwaZulu-Natal SouthAfrica/KRISP-0197/2020 EPI_ISL_482713 division KwaZulu-Natal SouthAfrica/KRISP-0198/2020 EPI_ISL_482851 division KwaZulu-Natal @@ -22997,6 +24523,140 @@ SouthAfrica/KRISP-0395/2020 EPI_ISL_487338 location eThekwini SouthAfrica/KRISP-0396/2020 EPI_ISL_487339 location eThekwini SouthAfrica/KRISP-0397/2020 EPI_ISL_487340 location eThekwini SouthAfrica/KRISP-0398/2020 EPI_ISL_487341 location eThekwini +SouthAfrica/KRISP-0435/2020 EPI_ISL_498054 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0436/2020 EPI_ISL_498055 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0551/2020 EPI_ISL_498090 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0552/2020 EPI_ISL_498091 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0553/2020 EPI_ISL_498092 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0554/2020 EPI_ISL_498093 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0440/2020 EPI_ISL_498056 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0441/2020 EPI_ISL_498057 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0445/2020 EPI_ISL_498058 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0446/2020 EPI_ISL_498059 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0543/2020 EPI_ISL_498084 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0576/2020 EPI_ISL_498114 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0577/2020 EPI_ISL_498115 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0578/2020 EPI_ISL_498116 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0579/2020 EPI_ISL_498117 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0580/2020 EPI_ISL_498118 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0581/2020 EPI_ISL_498119 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0582/2020 EPI_ISL_498120 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0583/2020 EPI_ISL_498121 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0584/2020 EPI_ISL_498122 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0585/2020 EPI_ISL_498123 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0586/2020 EPI_ISL_498124 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0587/2020 EPI_ISL_498125 division KwaZulu-Natal # previously Kzn 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KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0539/2020 EPI_ISL_498081 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0540/2020 EPI_ISL_498082 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0541/2020 EPI_ISL_498083 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0544/2020 EPI_ISL_498085 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0559/2020 EPI_ISL_498098 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0560/2020 EPI_ISL_498099 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0565/2020 EPI_ISL_498104 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0571/2020 EPI_ISL_498109 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0573/2020 EPI_ISL_498111 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0533/2020 EPI_ISL_498076 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0548/2020 EPI_ISL_498087 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0549/2020 EPI_ISL_498088 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0550/2020 EPI_ISL_498089 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0555/2020 EPI_ISL_498094 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0556/2020 EPI_ISL_498095 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0558/2020 EPI_ISL_498097 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0561/2020 EPI_ISL_498100 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0562/2020 EPI_ISL_498101 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0563/2020 EPI_ISL_498102 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0564/2020 EPI_ISL_498103 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0567/2020 EPI_ISL_498105 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0568/2020 EPI_ISL_498106 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0569/2020 EPI_ISL_498107 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-0574/2020 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iLembe # previously Ilembe +SouthAfrica/KRISP-0581/2020 EPI_ISL_498119 location iLembe # previously Ilembe +SouthAfrica/KRISP-0582/2020 EPI_ISL_498120 location iLembe # previously Ilembe +SouthAfrica/KRISP-0583/2020 EPI_ISL_498121 location iLembe # previously Ilembe +SouthAfrica/KRISP-0584/2020 EPI_ISL_498122 location iLembe # previously Ilembe +SouthAfrica/KRISP-0585/2020 EPI_ISL_498123 location iLembe # previously Ilembe +SouthAfrica/KRISP-0586/2020 EPI_ISL_498124 location iLembe # previously Ilembe +SouthAfrica/KRISP-0587/2020 EPI_ISL_498125 location iLembe # previously Ilembe +SouthAfrica/KRISP-0588/2020 EPI_ISL_498126 location iLembe # previously Ilembe +SouthAfrica/KRISP-0489/2020 EPI_ISL_498060 location uMkhanyakude # previously Umkhanyakude +SouthAfrica/KRISP-0490/2020 EPI_ISL_498061 location uMkhanyakude # previously Umkhanyakude +SouthAfrica/KRISP-0491/2020 EPI_ISL_498062 location uMkhanyakude # previously Umkhanyakude +SouthAfrica/KRISP-0492/2020 EPI_ISL_498063 location uMkhanyakude # previously Umkhanyakude +SouthAfrica/KRISP-0493/2020 EPI_ISL_498064 location uMkhanyakude # previously Umkhanyakude +SouthAfrica/KRISP-0494/2020 EPI_ISL_498065 location uMkhanyakude # previously Umkhanyakude +SouthAfrica/KRISP-0497/2020 EPI_ISL_498066 location uMkhanyakude # previously Umkhanyakude +SouthAfrica/KRISP-0498/2020 EPI_ISL_498067 location uMkhanyakude # previously Umkhanyakude +SouthAfrica/KRISP-0500/2020 EPI_ISL_498068 location uMkhanyakude # previously Umkhanyakude +SouthAfrica/KRISP-0501/2020 EPI_ISL_498069 location uMkhanyakude # previously Umkhanyakude +SouthAfrica/KRISP-0535/2020 EPI_ISL_498078 location uMkhanyakude # previously Umkhanyakude +SouthAfrica/KRISP-0502/2020 EPI_ISL_498070 location uMgungundlovu # previously Umgungundlovu +SouthAfrica/KRISP-0503/2020 EPI_ISL_498071 location uMgungundlovu # previously Umgungundlovu +SouthAfrica/KRISP-0570/2020 EPI_ISL_498108 location uMgungundlovu # previously Umgungundlovu +SouthAfrica/KRISP-0529/2020 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Ethekwini +SouthAfrica/KRISP-0385/2020 EPI_ISL_495526 location eThekwini # previously Ethekwini +SouthAfrica/KRISP-0410/2020 EPI_ISL_495535 location eThekwini # previously Ethekwini +SouthAfrica/KRISP-0411/2020 EPI_ISL_495536 location eThekwini # previously Ethekwini +SouthAfrica/KRISP-0412/2020 EPI_ISL_495537 location eThekwini # previously Ethekwini +SouthAfrica/KRISP-0413/2020 EPI_ISL_495538 location eThekwini # previously Ethekwini +SouthAfrica/KRISP-0414/2020 EPI_ISL_495539 location eThekwini # previously Ethekwini +SouthAfrica/KRISP-0415/2020 EPI_ISL_495540 location eThekwini # previously Ethekwini +SouthAfrica/KRISP-0417/2020 EPI_ISL_495541 location eThekwini # previously Ethekwini +SouthAfrica/KRISP-0418/2020 EPI_ISL_495542 location eThekwini # previously Ethekwini +SouthAfrica/KRISP-0450/2020 EPI_ISL_495548 location eThekwini # previously Ethekwini +SouthAfrica/KRISP-0458/2020 EPI_ISL_495549 location eThekwini # previously Ethekwini +SouthAfrica/KRISP-0460/2020 EPI_ISL_495550 location eThekwini # previously Ethekwini +SouthAfrica/KRISP-0461/2020 EPI_ISL_495551 location eThekwini # previously Ethekwini +SouthAfrica/KRISP-0462/2020 EPI_ISL_495552 location eThekwini # previously Ethekwini +SouthAfrica/KRISP-0224/2020 EPI_ISL_482724 location uThukela # previously Uthukela +SouthAfrica/KRISP-0245/2020 EPI_ISL_482726 location uThukela # previously Uthukela +SouthAfrica/KRISP-0255/2020 EPI_ISL_482728 location uThukela # previously Uthukela +SouthAfrica/KRISP-0243/2020 EPI_ISL_482725 location uMgungundlovu # previously Umgungundlovu +SouthAfrica/KRISP-0254/2020 EPI_ISL_482727 location uMgungundlovu # previously Umgungundlovu +SouthAfrica/KRISP-0426/2020 EPI_ISL_495546 location uMgungundlovu # previously Umgungundlovu +SouthAfrica/KRISP-0478/2020 EPI_ISL_495559 location uMgungundlovu # previously Umgungundlovu +SouthAfrica/KRISP-0481/2020 EPI_ISL_495560 location uMgungundlovu # previously Umgungundlovu +SouthAfrica/KRISP-0337/2020 EPI_ISL_495517 location Harry Gwala # previously Sisonke +SouthAfrica/KRISP-0344/2020 EPI_ISL_495520 location uMzinyathi # previously Umzinyathi +SouthAfrica/KRISP-0406/2020 EPI_ISL_495531 location uMzinyathi # previously Umzinyathi +SouthAfrica/KRISP-0420/2020 EPI_ISL_495543 location iLembe # previously Ilembe +SouthAfrica/KRISP-0423/2020 EPI_ISL_495545 location iLembe # previously Ilembe +SouthAfrica/KRISP-0421/2020 EPI_ISL_495544 location King Cetshwayo # previously Uthungulu +SouthAfrica/KRISP-0431/2020 EPI_ISL_495547 location King Cetshwayo # previously Uthungulu +SouthAfrica/KRISP-0464/2020 EPI_ISL_495553 location King Cetshwayo # previously Uthungulu +SouthAfrica/KRISP-0468/2020 EPI_ISL_495554 location King Cetshwayo # previously Uthungulu +SouthAfrica/KRISP-0485/2020 EPI_ISL_495561 location uMkhanyakude # previously Umkhanyakude +SouthAfrica/KRISP-0487/2020 EPI_ISL_495562 location uMkhanyakude # previously Umkhanyakude +SouthAfrica/R12525-20/2020 EPI_ISL_504186 division North-West # previously North West +SouthAfrica/R12534-20/2020 EPI_ISL_504187 division North-West # previously North West +SouthAfrica/R12544-20/2020 EPI_ISL_504188 division North-West # previously North West +SouthAfrica/R12547-20/2020 EPI_ISL_504189 division North-West # previously North West +SouthAfrica/R12550-20/2020 EPI_ISL_504190 division North-West # previously North West +SouthAfrica/R12566-20/2020 EPI_ISL_504191 division North-West # previously North West +SouthAfrica/R12572-20/2020 EPI_ISL_504192 division North-West # previously North West +SouthAfrica/R12574-20/2020 EPI_ISL_504193 division North-West # previously North West +SouthAfrica/R12578-20/2020 EPI_ISL_504194 division North-West # previously North West +SouthAfrica/R12579-20/2020 EPI_ISL_504195 division North-West # previously North West +SouthAfrica/R12583-20/2020 EPI_ISL_504196 division North-West # previously North West +SouthAfrica/R12588-20/2020 EPI_ISL_504197 division North-West # previously North West +SouthAfrica/R12597-20/2020 EPI_ISL_504198 division North-West # previously North West +SouthAfrica/R12601-20/2020 EPI_ISL_504199 division North-West # previously North West +SouthAfrica/R12611-20/2020 EPI_ISL_504200 division North-West # previously North West +SouthAfrica/R12620-20/2020 EPI_ISL_504201 division North-West # previously North West +SouthAfrica/R12631-20/2020 EPI_ISL_504202 division North-West # previously North West +SouthAfrica/R12641-20/2020 EPI_ISL_504203 division North-West # previously North West +SouthAfrica/R12642-20/2020 EPI_ISL_504204 division North-West # previously North West +SouthAfrica/R12643-20/2020 EPI_ISL_504205 division North-West # previously North West +SouthAfrica/R12646-20/2020 EPI_ISL_504206 division North-West # previously North West +SouthAfrica/R12647-20/2020 EPI_ISL_504207 division North-West # previously North West +SouthAfrica/R12648-20/2020 EPI_ISL_504208 division North-West # previously North West +SouthAfrica/R12649-20/2020 EPI_ISL_504209 division North-West # previously North West +SouthAfrica/R12652-20/2020 EPI_ISL_504210 division North-West # previously North West +SouthAfrica/R12656-20/2020 EPI_ISL_504211 division North-West # previously North West +SouthAfrica/R12658-20/2020 EPI_ISL_504212 division North-West # previously North West +SouthAfrica/R12659-20/2020 EPI_ISL_504213 division North-West # previously North West +SouthAfrica/R12660-20/2020 EPI_ISL_504214 division North-West # previously North West +SouthAfrica/R12662-20/2020 EPI_ISL_504215 division North-West # previously North West +SouthAfrica/R12665-20/2020 EPI_ISL_504216 division North-West # previously North West +SouthAfrica/R12669-20/2020 EPI_ISL_504217 division North-West # previously North West +SouthAfrica/R12670-20/2020 EPI_ISL_504218 division North-West # previously North West +SouthAfrica/R12672-20/2020 EPI_ISL_504219 division North-West # previously North West +SouthAfrica/R12678-20/2020 EPI_ISL_504220 division North-West # previously North West +SouthAfrica/R12680-20/2020 EPI_ISL_504221 division North-West # previously North West +SouthAfrica/R12681-20/2020 EPI_ISL_504222 division North-West # previously North West +SouthAfrica/R12682-20/2020 EPI_ISL_504223 division North-West # previously North West +SouthAfrica/R12683-20/2020 EPI_ISL_504224 division North-West # previously North West +SouthAfrica/R12684-20/2020 EPI_ISL_504225 division North-West # previously North West +SouthAfrica/R12685-20/2020 EPI_ISL_504226 division North-West # previously North West +SouthAfrica/R12686-20/2020 EPI_ISL_504227 division North-West # previously North West +SouthAfrica/R12692-20/2020 EPI_ISL_504228 division North-West # previously North West +SouthAfrica/R12695-20/2020 EPI_ISL_504229 division North-West # previously North West +SouthAfrica/R12697-20/2020 EPI_ISL_504230 division North-West # previously North West +SouthAfrica/R12701-20/2020 EPI_ISL_504231 division North-West # previously North West +SouthAfrica/R12702-20/2020 EPI_ISL_504232 division North-West # previously North West +SouthAfrica/R12703-20/2020 EPI_ISL_504233 division North-West # previously North West +SouthAfrica/R12705-20/2020 EPI_ISL_504234 division North-West # previously North West +SouthAfrica/R12707-20/2020 EPI_ISL_504235 division North-West # previously North West +SouthAfrica/R12709-20/2020 EPI_ISL_504236 division North-West # previously North West +SouthAfrica/R12710-20/2020 EPI_ISL_504237 division North-West # previously North West +SouthAfrica/R12711-20/2020 EPI_ISL_504238 division North-West # previously North West +SouthAfrica/R12713-20/2020 EPI_ISL_504239 division North-West # previously North West +SouthAfrica/R12714-20/2020 EPI_ISL_504240 division North-West # previously North West +SouthAfrica/R12716-20/2020 EPI_ISL_504241 division North-West # previously North West +SouthAfrica/R12721-20/2020 EPI_ISL_504242 division North-West # previously North West +SouthAfrica/R12723-20/2020 EPI_ISL_504243 division North-West # previously North West +SouthAfrica/R12726-20/2020 EPI_ISL_504244 division North-West # previously North West +SouthAfrica/KRISP-K000566/2020 EPI_ISL_509223 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000567/2020 EPI_ISL_509224 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000568/2020 EPI_ISL_509225 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000569/2020 EPI_ISL_509226 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000571/2020 EPI_ISL_509227 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000572/2020 EPI_ISL_509228 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000573/2020 EPI_ISL_509229 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000574/2020 EPI_ISL_509230 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000575/2020 EPI_ISL_509231 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000576/2020 EPI_ISL_509232 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000577/2020 EPI_ISL_509233 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000578/2020 EPI_ISL_509234 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000579/2020 EPI_ISL_509235 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000580/2020 EPI_ISL_509236 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000581/2020 EPI_ISL_509237 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000582/2020 EPI_ISL_509238 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000583/2020 EPI_ISL_509239 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000584/2020 EPI_ISL_509240 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000585/2020 EPI_ISL_509241 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000586/2020 EPI_ISL_509242 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000588/2020 EPI_ISL_509243 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000589/2020 EPI_ISL_509244 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000591/2020 EPI_ISL_509245 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000592/2020 EPI_ISL_509246 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000594/2020 EPI_ISL_509247 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000595/2020 EPI_ISL_509248 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000596/2020 EPI_ISL_509249 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000597/2020 EPI_ISL_509250 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000598/2020 EPI_ISL_509251 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000599/2020 EPI_ISL_509252 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000600/2020 EPI_ISL_509253 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000601/2020 EPI_ISL_509254 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000602/2020 EPI_ISL_509255 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000603/2020 EPI_ISL_509256 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000604/2020 EPI_ISL_509257 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000605/2020 EPI_ISL_509258 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000606/2020 EPI_ISL_509259 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000607/2020 EPI_ISL_509260 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000608/2020 EPI_ISL_509261 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000609/2020 EPI_ISL_509262 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000611/2020 EPI_ISL_509263 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000612/2020 EPI_ISL_509264 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000613/2020 EPI_ISL_509265 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000614/2020 EPI_ISL_509266 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000615/2020 EPI_ISL_509267 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000616/2020 EPI_ISL_509268 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000617/2020 EPI_ISL_509269 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000618/2020 EPI_ISL_509270 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000619/2020 EPI_ISL_509271 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000620/2020 EPI_ISL_509272 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000621/2020 EPI_ISL_509273 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000622/2020 EPI_ISL_509274 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000623/2020 EPI_ISL_509275 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000624/2020 EPI_ISL_509276 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000625/2020 EPI_ISL_509277 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000626/2020 EPI_ISL_509278 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000628/2020 EPI_ISL_509279 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000629/2020 EPI_ISL_509280 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000630/2020 EPI_ISL_509281 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000631/2020 EPI_ISL_509282 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000632/2020 EPI_ISL_509283 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000633/2020 EPI_ISL_509284 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000635/2020 EPI_ISL_509285 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000636/2020 EPI_ISL_509286 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000637/2020 EPI_ISL_509287 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000639/2020 EPI_ISL_509288 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000640/2020 EPI_ISL_509289 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000641/2020 EPI_ISL_509290 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000642/2020 EPI_ISL_509291 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000643/2020 EPI_ISL_509292 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000649/2020 EPI_ISL_509293 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000650/2020 EPI_ISL_509294 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000651/2020 EPI_ISL_509295 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000652/2020 EPI_ISL_509296 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000654/2020 EPI_ISL_509297 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000655/2020 EPI_ISL_509298 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000658/2020 EPI_ISL_509299 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000659/2020 EPI_ISL_509300 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001035/2020 EPI_ISL_509301 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001037/2020 EPI_ISL_509302 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001038/2020 EPI_ISL_509303 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001041/2020 EPI_ISL_509304 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001043/2020 EPI_ISL_509305 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001044/2020 EPI_ISL_509306 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001045/2020 EPI_ISL_509307 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001049/2020 EPI_ISL_509308 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001051/2020 EPI_ISL_509309 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001052/2020 EPI_ISL_509310 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001053/2020 EPI_ISL_509311 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001054/2020 EPI_ISL_509312 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001055/2020 EPI_ISL_509313 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001057/2020 EPI_ISL_509314 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001058/2020 EPI_ISL_509315 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001059/2020 EPI_ISL_509316 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001061/2020 EPI_ISL_509317 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001062/2020 EPI_ISL_509318 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001063/2020 EPI_ISL_509319 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001064/2020 EPI_ISL_509320 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001065/2020 EPI_ISL_509321 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001066/2020 EPI_ISL_509322 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001067/2020 EPI_ISL_509323 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001068/2020 EPI_ISL_509324 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001071/2020 EPI_ISL_509325 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001072/2020 EPI_ISL_509326 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001073/2020 EPI_ISL_509327 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001074/2020 EPI_ISL_509328 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001075/2020 EPI_ISL_509329 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001076/2020 EPI_ISL_509330 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001077/2020 EPI_ISL_509331 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001078/2020 EPI_ISL_509332 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001079/2020 EPI_ISL_509333 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001080/2020 EPI_ISL_509334 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001082/2020 EPI_ISL_509335 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001083/2020 EPI_ISL_509336 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001084/2020 EPI_ISL_509337 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001085/2020 EPI_ISL_509338 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001087/2020 EPI_ISL_509339 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001088/2020 EPI_ISL_509340 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001089/2020 EPI_ISL_509341 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001091/2020 EPI_ISL_509342 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001092/2020 EPI_ISL_509343 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001093/2020 EPI_ISL_509344 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001096/2020 EPI_ISL_509345 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001097/2020 EPI_ISL_509346 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001098/2020 EPI_ISL_509347 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001099/2020 EPI_ISL_509348 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001100/2020 EPI_ISL_509349 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001101/2020 EPI_ISL_509350 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001102/2020 EPI_ISL_509351 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001103/2020 EPI_ISL_509352 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001104/2020 EPI_ISL_509353 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001105/2020 EPI_ISL_509354 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001106/2020 EPI_ISL_509355 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001109/2020 EPI_ISL_509356 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001110/2020 EPI_ISL_509357 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001112/2020 EPI_ISL_509358 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001113/2020 EPI_ISL_509359 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001114/2020 EPI_ISL_509360 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001115/2020 EPI_ISL_509361 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001116/2020 EPI_ISL_509362 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001117/2020 EPI_ISL_509363 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001118/2020 EPI_ISL_509364 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001121/2020 EPI_ISL_509365 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001123/2020 EPI_ISL_509366 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001124/2020 EPI_ISL_509367 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001125/2020 EPI_ISL_509368 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001126/2020 EPI_ISL_509369 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001127/2020 EPI_ISL_509370 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K001128/2020 EPI_ISL_509371 division KwaZulu-Natal # previously Kzn +SouthAfrica/KRISP-K000566/2020 EPI_ISL_509223 location uThukela +SouthAfrica/KRISP-K000567/2020 EPI_ISL_509224 location uMgungundlovu +SouthAfrica/KRISP-K000568/2020 EPI_ISL_509225 location uMkhanyakude +SouthAfrica/KRISP-K000569/2020 EPI_ISL_509226 location Ugu +SouthAfrica/KRISP-K000571/2020 EPI_ISL_509227 location uThukela +SouthAfrica/KRISP-K000572/2020 EPI_ISL_509228 location uThukela +SouthAfrica/KRISP-K000573/2020 EPI_ISL_509229 location uMzinyathi +SouthAfrica/KRISP-K000574/2020 EPI_ISL_509230 location Zululand +SouthAfrica/KRISP-K000575/2020 EPI_ISL_509231 location iLembe +SouthAfrica/KRISP-K000576/2020 EPI_ISL_509232 location uMgungundlovu +SouthAfrica/KRISP-K000577/2020 EPI_ISL_509233 location uThukela +SouthAfrica/KRISP-K000578/2020 EPI_ISL_509234 location King Cetshwayo +SouthAfrica/KRISP-K000579/2020 EPI_ISL_509235 location uThukela +SouthAfrica/KRISP-K000580/2020 EPI_ISL_509236 location iLembe +SouthAfrica/KRISP-K000581/2020 EPI_ISL_509237 location Zululand +SouthAfrica/KRISP-K000582/2020 EPI_ISL_509238 location Zululand +SouthAfrica/KRISP-K000583/2020 EPI_ISL_509239 location uMgungundlovu +SouthAfrica/KRISP-K000584/2020 EPI_ISL_509240 location uMgungundlovu +SouthAfrica/KRISP-K000585/2020 EPI_ISL_509241 location iLembe +SouthAfrica/KRISP-K000586/2020 EPI_ISL_509242 location uMgungundlovu +SouthAfrica/KRISP-K000588/2020 EPI_ISL_509243 location uThukela +SouthAfrica/KRISP-K000589/2020 EPI_ISL_509244 location Ugu +SouthAfrica/KRISP-K000591/2020 EPI_ISL_509245 location Zululand +SouthAfrica/KRISP-K000592/2020 EPI_ISL_509246 location iLembe +SouthAfrica/KRISP-K000594/2020 EPI_ISL_509247 location uThukela +SouthAfrica/KRISP-K000595/2020 EPI_ISL_509248 location uThukela +SouthAfrica/KRISP-K000596/2020 EPI_ISL_509249 location uThukela +SouthAfrica/KRISP-K000597/2020 EPI_ISL_509250 location iLembe +SouthAfrica/KRISP-K000598/2020 EPI_ISL_509251 location uThukela +SouthAfrica/KRISP-K000599/2020 EPI_ISL_509252 location iLembe +SouthAfrica/KRISP-K000600/2020 EPI_ISL_509253 location uThukela +SouthAfrica/KRISP-K000601/2020 EPI_ISL_509254 location Ugu +SouthAfrica/KRISP-K000602/2020 EPI_ISL_509255 location uThukela +SouthAfrica/KRISP-K000603/2020 EPI_ISL_509256 location uThukela +SouthAfrica/KRISP-K000604/2020 EPI_ISL_509257 location uThukela +SouthAfrica/KRISP-K000605/2020 EPI_ISL_509258 location uThukela +SouthAfrica/KRISP-K000606/2020 EPI_ISL_509259 location uThukela +SouthAfrica/KRISP-K000607/2020 EPI_ISL_509260 location Ugu +SouthAfrica/KRISP-K000608/2020 EPI_ISL_509261 location uThukela +SouthAfrica/KRISP-K000609/2020 EPI_ISL_509262 location uThukela +SouthAfrica/KRISP-K000611/2020 EPI_ISL_509263 location uThukela +SouthAfrica/KRISP-K000612/2020 EPI_ISL_509264 location uThukela +SouthAfrica/KRISP-K000613/2020 EPI_ISL_509265 location uMgungundlovu 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+SouthAfrica/KRISP-K000630/2020 EPI_ISL_509281 location uThukela +SouthAfrica/KRISP-K000631/2020 EPI_ISL_509282 location uThukela +SouthAfrica/KRISP-K000632/2020 EPI_ISL_509283 location uThukela +SouthAfrica/KRISP-K000633/2020 EPI_ISL_509284 location uThukela +SouthAfrica/KRISP-K000635/2020 EPI_ISL_509285 location uThukela +SouthAfrica/KRISP-K000636/2020 EPI_ISL_509286 location Zululand +SouthAfrica/KRISP-K000637/2020 EPI_ISL_509287 location uMgungundlovu +SouthAfrica/KRISP-K000639/2020 EPI_ISL_509288 location Zululand +SouthAfrica/KRISP-K000640/2020 EPI_ISL_509289 location Zululand +SouthAfrica/KRISP-K000641/2020 EPI_ISL_509290 location Zululand +SouthAfrica/KRISP-K000642/2020 EPI_ISL_509291 location Zululand +SouthAfrica/KRISP-K000643/2020 EPI_ISL_509292 location uThukela +SouthAfrica/KRISP-K000649/2020 EPI_ISL_509293 location Zululand +SouthAfrica/KRISP-K000650/2020 EPI_ISL_509294 location Zululand +SouthAfrica/KRISP-K000651/2020 EPI_ISL_509295 location Zululand +SouthAfrica/KRISP-K000652/2020 EPI_ISL_509296 location uMgungundlovu +SouthAfrica/KRISP-K000654/2020 EPI_ISL_509297 location Zululand +SouthAfrica/KRISP-K000655/2020 EPI_ISL_509298 location uMgungundlovu +SouthAfrica/KRISP-K000658/2020 EPI_ISL_509299 location uThukela +SouthAfrica/KRISP-K000659/2020 EPI_ISL_509300 location Zululand +SouthAfrica/KRISP-K001035/2020 EPI_ISL_509301 location eThekwini +SouthAfrica/KRISP-K001037/2020 EPI_ISL_509302 location eThekwini +SouthAfrica/KRISP-K001038/2020 EPI_ISL_509303 location eThekwini +SouthAfrica/KRISP-K001041/2020 EPI_ISL_509304 location eThekwini +SouthAfrica/KRISP-K001043/2020 EPI_ISL_509305 location uMkhanyakude +SouthAfrica/KRISP-K001044/2020 EPI_ISL_509306 location eThekwini +SouthAfrica/KRISP-K001045/2020 EPI_ISL_509307 location eThekwini +SouthAfrica/KRISP-K001049/2020 EPI_ISL_509308 location eThekwini +SouthAfrica/KRISP-K001051/2020 EPI_ISL_509309 location Amajuba +SouthAfrica/KRISP-K001052/2020 EPI_ISL_509310 location Amajuba +SouthAfrica/KRISP-K001053/2020 EPI_ISL_509311 location uMgungundlovu +SouthAfrica/KRISP-K001054/2020 EPI_ISL_509312 location eThekwini +SouthAfrica/KRISP-K001055/2020 EPI_ISL_509313 location eThekwini +SouthAfrica/KRISP-K001057/2020 EPI_ISL_509314 location Amajuba +SouthAfrica/KRISP-K001058/2020 EPI_ISL_509315 location uThukela +SouthAfrica/KRISP-K001059/2020 EPI_ISL_509316 location uMzinyathi +SouthAfrica/KRISP-K001061/2020 EPI_ISL_509317 location King Cetshwayo +SouthAfrica/KRISP-K001062/2020 EPI_ISL_509318 location Zululand +SouthAfrica/KRISP-K001063/2020 EPI_ISL_509319 location uMgungundlovu +SouthAfrica/KRISP-K001064/2020 EPI_ISL_509320 location uMgungundlovu +SouthAfrica/KRISP-K001065/2020 EPI_ISL_509321 location Zululand +SouthAfrica/KRISP-K001066/2020 EPI_ISL_509322 location uMzinyathi +SouthAfrica/KRISP-K001067/2020 EPI_ISL_509323 location Zululand +SouthAfrica/KRISP-K001068/2020 EPI_ISL_509324 location Amajuba +SouthAfrica/KRISP-K001071/2020 EPI_ISL_509325 location eThekwini 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+SouthAfrica/KRISP-K001089/2020 EPI_ISL_509341 location uMgungundlovu +SouthAfrica/KRISP-K001091/2020 EPI_ISL_509342 location uThukela +SouthAfrica/KRISP-K001092/2020 EPI_ISL_509343 location Zululand +SouthAfrica/KRISP-K001093/2020 EPI_ISL_509344 location uThukela +SouthAfrica/KRISP-K001096/2020 EPI_ISL_509345 location uThukela +SouthAfrica/KRISP-K001097/2020 EPI_ISL_509346 location Zululand +SouthAfrica/KRISP-K001098/2020 EPI_ISL_509347 location uThukela +SouthAfrica/KRISP-K001099/2020 EPI_ISL_509348 location Zululand +SouthAfrica/KRISP-K001100/2020 EPI_ISL_509349 location uThukela +SouthAfrica/KRISP-K001101/2020 EPI_ISL_509350 location uThukela +SouthAfrica/KRISP-K001102/2020 EPI_ISL_509351 location uThukela +SouthAfrica/KRISP-K001103/2020 EPI_ISL_509352 location uThukela +SouthAfrica/KRISP-K001104/2020 EPI_ISL_509353 location uMgungundlovu +SouthAfrica/KRISP-K001105/2020 EPI_ISL_509354 location uThukela +SouthAfrica/KRISP-K001106/2020 EPI_ISL_509355 location uMgungundlovu +SouthAfrica/KRISP-K001109/2020 EPI_ISL_509356 location iLembe +SouthAfrica/KRISP-K001110/2020 EPI_ISL_509357 location iLembe +SouthAfrica/KRISP-K001112/2020 EPI_ISL_509358 location iLembe +SouthAfrica/KRISP-K001113/2020 EPI_ISL_509359 location iLembe +SouthAfrica/KRISP-K001114/2020 EPI_ISL_509360 location iLembe +SouthAfrica/KRISP-K001115/2020 EPI_ISL_509361 location iLembe +SouthAfrica/KRISP-K001116/2020 EPI_ISL_509362 location iLembe +SouthAfrica/KRISP-K001117/2020 EPI_ISL_509363 location iLembe +SouthAfrica/KRISP-K001118/2020 EPI_ISL_509364 location iLembe +SouthAfrica/KRISP-K001121/2020 EPI_ISL_509365 location iLembe +SouthAfrica/KRISP-K001123/2020 EPI_ISL_509366 location iLembe +SouthAfrica/KRISP-K001124/2020 EPI_ISL_509367 location iLembe +SouthAfrica/KRISP-K001125/2020 EPI_ISL_509368 location iLembe +SouthAfrica/KRISP-K001126/2020 EPI_ISL_509369 location iLembe +SouthAfrica/KRISP-K001127/2020 EPI_ISL_509370 location iLembe +SouthAfrica/KRISP-K001128/2020 EPI_ISL_509371 location iLembe SouthKorea/KCDC03/2020 EPI_ISL_407193 division Gyeonggi Province SouthKorea/KCDC03/2020 EPI_ISL_407193 location Gyeonggi SouthKorea/KCDC03/2020 EPI_ISL_407193 country South Korea @@ -23102,6 +25235,56 @@ SouthKorea/S4/2020 EPI_ISL_485395 division Gyeonggi Province # previously false SouthKorea/S4/2020 EPI_ISL_485395 location Uijeongbu SouthKorea/S5/2020 EPI_ISL_485396 division Gyeonggi Province # previously false division Uijeongbu SouthKorea/S5/2020 EPI_ISL_485396 location Uijeongbu +Korea/KCDC2125/2020 EPI_ISL_498026 strain SouthKorea/KCDC2125/2020 +Korea/KCDC2128/2020 EPI_ISL_498029 strain SouthKorea/KCDC2128/2020 +Korea/KCDC2129/2020 EPI_ISL_498030 strain SouthKorea/KCDC2129/2020 +Korea/KCDC2130/2020 EPI_ISL_498031 strain SouthKorea/KCDC2130/2020 +Korea/KCDC2131/2020 EPI_ISL_498032 strain SouthKorea/KCDC2131/2020 +Korea/KCDC2132/2020 EPI_ISL_498033 strain SouthKorea/KCDC2132/2020 +Korea/KCDC2133/2020 EPI_ISL_498034 strain SouthKorea/KCDC2133/2020 +Korea/KCDC2134/2020 EPI_ISL_498035 strain SouthKorea/KCDC2134/2020 +Korea/KCDC2136/2020 EPI_ISL_498037 strain SouthKorea/KCDC2136/2020 +Korea/KCDC2137/2020 EPI_ISL_498038 strain SouthKorea/KCDC2137/2020 +Korea/KCDC2138/2020 EPI_ISL_498039 strain SouthKorea/KCDC2138/2020 +Korea/KCDC2139/2020 EPI_ISL_498040 strain SouthKorea/KCDC2139/2020 +Korea/KCDC2140/2020 EPI_ISL_498041 strain SouthKorea/KCDC2140/2020 +Korea/KCDC2141/2020 EPI_ISL_498042 strain SouthKorea/KCDC2141/2020 +Korea/KCDC2143/2020 EPI_ISL_498044 strain SouthKorea/KCDC2143/2020 +Korea/KCDC2144/2020 EPI_ISL_498045 strain SouthKorea/KCDC2144/2020 +Korea/KCDC2145/2020 EPI_ISL_498046 strain SouthKorea/KCDC2145/2020 +Korea/KCDC2146/2020 EPI_ISL_498047 strain SouthKorea/KCDC2146/2020 +Korea/KCDC2147/2020 EPI_ISL_498048 strain SouthKorea/KCDC2147/2020 +Korea/KCDC2148/2020 EPI_ISL_498049 strain SouthKorea/KCDC2148/2020 +Korea/KCDC2149/2020 EPI_ISL_498050 strain SouthKorea/KCDC2149/2020 +Korea/KCDC2150/2020 EPI_ISL_498051 strain SouthKorea/KCDC2150/2020 +Korea/KCDC2151/2020 EPI_ISL_498052 strain SouthKorea/KCDC2151/2020 +Korea/KCDC2152/2020 EPI_ISL_498053 strain SouthKorea/KCDC2152/2020 +Korea/KCDC2171/2020 EPI_ISL_506965 strain SouthKorea/KCDC2171/2020 +Korea/KCDC2172/2020 EPI_ISL_506966 strain SouthKorea/KCDC2172/2020 +Korea/KCDC2173/2020 EPI_ISL_506967 strain SouthKorea/KCDC2173/2020 +Korea/KCDC2174/2020 EPI_ISL_506968 strain SouthKorea/KCDC2174/2020 +Korea/KCDC2175/2020 EPI_ISL_506969 strain SouthKorea/KCDC2175/2020 +Korea/KCDC2176/2020 EPI_ISL_506970 strain SouthKorea/KCDC2176/2020 +Korea/KCDC2177/2020 EPI_ISL_506971 strain SouthKorea/KCDC2177/2020 +Korea/KCDC2178/2020 EPI_ISL_506972 strain SouthKorea/KCDC2178/2020 +Korea/KCDC2179/2020 EPI_ISL_506973 strain SouthKorea/KCDC2179/2020 +Korea/KCDC2180/2020 EPI_ISL_506974 strain SouthKorea/KCDC2180/2020 +Korea/KCDC2182/2020 EPI_ISL_506976 strain SouthKorea/KCDC2182/2020 +Korea/KCDC2183/2020 EPI_ISL_506977 strain SouthKorea/KCDC2183/2020 +Korea/KCDC2184/2020 EPI_ISL_506978 strain SouthKorea/KCDC2184/2020 +Korea/KCDC2185/2020 EPI_ISL_506979 strain SouthKorea/KCDC2185/2020 +Korea/KCDC2186/2020 EPI_ISL_506980 strain SouthKorea/KCDC2186/2020 +Korea/KCDC2187/2020 EPI_ISL_506981 strain SouthKorea/KCDC2187/2020 +Korea/KCDC2188/2020 EPI_ISL_506982 strain SouthKorea/KCDC2188/2020 +Korea/KCDC2189/2020 EPI_ISL_506983 strain SouthKorea/KCDC2189/2020 +Korea/KCDC2190/2020 EPI_ISL_506984 strain SouthKorea/KCDC2190/2020 +Korea/KCDC2194/2020 EPI_ISL_506988 strain SouthKorea/KCDC2194/2020 +Korea/KCDC2195/2020 EPI_ISL_506989 strain SouthKorea/KCDC2195/2020 +Korea/KCDC2196/2020 EPI_ISL_506990 strain SouthKorea/KCDC2196/2020 +Korea/KCDC2198/2020 EPI_ISL_506992 strain SouthKorea/KCDC2198/2020 +Korea/KCDC2199/2020 EPI_ISL_506993 strain SouthKorea/KCDC2199/2020 +Korea/KCDC2200/2020 EPI_ISL_506994 strain SouthKorea/KCDC2200/2020 +Korea/KCDC2202/2020 EPI_ISL_506995 strain SouthKorea/KCDC2202/2020 Spain/Albal648/2020 EPI_ISL_455721 division Comunitat Valenciana # previously Comunitat_Valenciana Spain/Alicante569/2020 EPI_ISL_447500 division Comunitat Valenciana # previously Comunitat_Valenciana Spain/Almassera633/2020 EPI_ISL_455722 division Comunitat Valenciana # previously Comunitat_Valenciana @@ -23129,7 +25312,7 @@ Spain/Barcelona_VH7773/2020 EPI_ISL_444976 division Catalunya Spain/Barcelona_VH8938/2020 EPI_ISL_444986 division Catalunya Spain/Barcelona_VH9434/2020 EPI_ISL_444987 division Catalunya Spain/Barcelona_VH7924/2020 EPI_ISL_450337 division Catalunya -hCoV19/Spain/Barcelona_VH9758/2020 EPI_ISL_458132 division Catalunya # previously Catalonia +Spain/Barcelona_VH9758/2020 EPI_ISL_458132 division Catalunya # previously Catalonia Spain/Barcelona_VH8002/2020 EPI_ISL_458130 division Catalunya # previously Catalonia Spain/Barcelona_VH9461/2020 EPI_ISL_458131 division Catalunya # previously Catalonia Spain/Barcelona_h_COV003726/2020 EPI_ISL_480989 location Barcelona @@ -23496,6 +25679,9 @@ Spain/COV001392/2020 EPI_ISL_452509 division La Rioja Spain/COV001392/2020 EPI_ISL_452509 location Calahorra Spain/COV001397/2020 EPI_ISL_452504 division Basque Country # previously Basque_Country Spain/COV001397/2020 EPI_ISL_452504 location Vitoria-Gasteiz # previously Vitoria +Spain/COV001537/2020 EPI_ISL_509616 location Vitoria-Gasteiz # previously Vitoria +Spain/COV001538/2020 EPI_ISL_509617 location Vitoria-Gasteiz # previously Vitoria +Spain/COV001542/2020 EPI_ISL_509618 location Vitoria-Gasteiz # previously Vitoria Spain/COV001421/2020 EPI_ISL_452480 division Basque Country Spain/COV001421/2020 EPI_ISL_452480 location Portugalete Spain/COV001423/2020 EPI_ISL_452478 division Navarra @@ -23535,6 +25721,9 @@ Spain/COV001954/2020 EPI_ISL_452425 division Andalusia Spain/COV001954/2020 EPI_ISL_452425 location Malaga Spain/COV002010/2020 EPI_ISL_452395 location Malaga # previously Malaga_h Spain/COV002036/2020 EPI_ISL_452389 location Malaga # previously Malaga_h +Spain/COV002011/2020 EPI_ISL_509611 location Malaga # previously Malaga H +Spain/COV002012/2020 EPI_ISL_509608 location Malaga # previously Malaga H +Spain/COV006376/2020 EPI_ISL_510109 location Arganda del Rey # previously Arganda Morocco/COV001884/2020 EPI_ISL_452463 location Cadiz Spain/COV001368/2020 EPI_ISL_452533 location Cizur Menor Spain/COV001373/2020 EPI_ISL_452528 location Cizur Menor @@ -23651,6 +25840,67 @@ Spain/COV002732/2020 EPI_ISL_467283 location Ribeira Spain/COV002738/2020 EPI_ISL_467291 location Boqueixón Spain/COV002753/2020 EPI_ISL_467277 location Noia Spain/COV003708/2020 EPI_ISL_467199 location Leganés +Spain/COV000667/2020 EPI_ISL_500228 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000668/2020 EPI_ISL_500229 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000672/2020 EPI_ISL_500230 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000673/2020 EPI_ISL_500231 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000674/2020 EPI_ISL_500232 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000675/2020 EPI_ISL_500233 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000676/2020 EPI_ISL_500234 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000681/2020 EPI_ISL_500235 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000687/2020 EPI_ISL_500236 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000688/2020 EPI_ISL_500237 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000700/2020 EPI_ISL_500238 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000701/2020 EPI_ISL_500239 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000719/2020 EPI_ISL_500240 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000722/2020 EPI_ISL_500241 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000723/2020 EPI_ISL_500242 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000724/2020 EPI_ISL_500243 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000725/2020 EPI_ISL_500244 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000726/2020 EPI_ISL_500245 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000731/2020 EPI_ISL_500246 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000733/2020 EPI_ISL_500247 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000734/2020 EPI_ISL_500248 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000735/2020 EPI_ISL_500249 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000739/2020 EPI_ISL_500250 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000740/2020 EPI_ISL_500251 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000741/2020 EPI_ISL_500252 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000742/2020 EPI_ISL_500253 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000747/2020 EPI_ISL_500254 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000753/2020 EPI_ISL_500255 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000755/2020 EPI_ISL_500256 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000757/2020 EPI_ISL_500257 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000761/2020 EPI_ISL_500258 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000762/2020 EPI_ISL_500259 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000763/2020 EPI_ISL_500260 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000764/2020 EPI_ISL_500261 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000765/2020 EPI_ISL_500262 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000767/2020 EPI_ISL_500263 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000771/2020 EPI_ISL_500264 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000772/2020 EPI_ISL_500265 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000773/2020 EPI_ISL_500266 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000787/2020 EPI_ISL_500267 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000789/2020 EPI_ISL_500268 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000790/2020 EPI_ISL_500269 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000795/2020 EPI_ISL_500270 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000797/2020 EPI_ISL_500271 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000798/2020 EPI_ISL_500272 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000801/2020 EPI_ISL_500273 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000808/2020 EPI_ISL_500274 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000809/2020 EPI_ISL_500275 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000810/2020 EPI_ISL_500276 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000811/2020 EPI_ISL_500277 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000818/2020 EPI_ISL_500278 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000819/2020 EPI_ISL_500279 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000821/2020 EPI_ISL_500280 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000824/2020 EPI_ISL_500281 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000825/2020 EPI_ISL_500282 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000834/2020 EPI_ISL_500283 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000836/2020 EPI_ISL_500284 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000838/2020 EPI_ISL_500285 location Vitoria-Gasteiz # previously Vitoria +Spain/COV000841/2020 EPI_ISL_500286 location Vitoria-Gasteiz # previously Vitoria +Spain/COV006423/2020 EPI_ISL_510138 location Rivas-Vaciamadrid # previously Rivas Vaciamadrid +Spain/COV006428/2020 EPI_ISL_510142 location San Fernando de Henares # previously San Fernando Spain/Gandia618/2020 EPI_ISL_455724 division Comunitat Valenciana # previously Comunitat_Valenciana Spain/Gandia640/2020 EPI_ISL_455725 division Comunitat Valenciana # previously Comunitat_Valenciana Spain/Gandia649/2020 EPI_ISL_455726 division Comunitat Valenciana # previously Comunitat_Valenciana @@ -24019,6 +26269,16 @@ Spain/irsiCaixa-sp15/2020 EPI_ISL_462449 division Catalunya # previously false d Spain/irsiCaixa-sp15/2020 EPI_ISL_462449 location Barcelona Spain/irsiCaixa-sp50/2020 EPI_ISL_462447 division Catalunya # previously false division Barcelona Spain/irsiCaixa-sp50/2020 EPI_ISL_462447 location Barcelona +Spain/Barcelona-h-COV005552/2020 EPI_ISL_508675 location Barcelona # previously Barcelona H +Spain/Barcelona-h-COV005635/2020 EPI_ISL_508676 location Barcelona # previously Barcelona H +Spain/COV004053/2020 EPI_ISL_510292 location Ribeira # previously Riveira +Spain/COV004057/2020 EPI_ISL_510295 location Ribeira # previously Riveira +Spain/CT-005479/2020 EPI_ISL_510522 location Badalona # previously Badalona H +Spain/CT-005487/2020 EPI_ISL_510523 location Badalona # previously Badalona H +Spain/CT-irsiCaixa-sp4-2/2020 EPI_ISL_510689 division Catalunya # previously false division Barcelona +Spain/CT-irsiCaixa-sp4-2/2020 EPI_ISL_510689 location Barcelona +Spain/COV004025/2020 EPI_ISL_510268 location Noia # previously Noya +Spain/COV004029/2020 EPI_ISL_510271 location Noia # previously Noya SriLanka/COV91/2020 EPI_ISL_428672 region Asia SriLanka/3865/2020 EPI_ISL_450171 division_exposure China SriLanka/3865/2020 EPI_ISL_450171 country_exposure China #Travel history @@ -24415,6 +26675,109 @@ Switzerland/180047_516_B07/2020 EPI_ISL_489983 division Zürich # previously Zur Switzerland/180020_495_H01/2020 EPI_ISL_489968 division Sankt Gallen # previously St Gallen Switzerland/180030_504_C01/2020 EPI_ISL_489972 division Sankt Gallen # previously St Gallen Switzerland/180038_509_G07/2020 EPI_ISL_489976 division Basel-Land # previously Basel-Landschaft +Switzerland/190004_533_G10/2020 EPI_ISL_498622 division Zürich # previously Zurich +Switzerland/190005_534_D5/2020 EPI_ISL_498623 division Zürich # previously Zurich +Switzerland/190007_536_A1/2020 EPI_ISL_498625 division Zürich # previously Zurich +Switzerland/190008_537_B3/2020 EPI_ISL_498626 division Zürich # previously Zurich +Switzerland/190006_535_F9/2020 EPI_ISL_498624 division Basel-Land # previously Basel-Landschaft +Switzerland/190012_539_C5/2020 EPI_ISL_500878 division Sankt Gallen # previously St Gallen +Switzerland/190013_540_B9/2020 EPI_ISL_500879 division Zürich # previously Zurich +Switzerland/190014_540_E7/2020 EPI_ISL_500880 division Zürich # previously Zurich +Switzerland/190019_543_A12/2020 EPI_ISL_500884 division Zürich # previously Zurich +Switzerland/190021_544_C4/2020 EPI_ISL_500886 division Zürich # previously Zurich +Switzerland/190025_546_A10/2020 EPI_ISL_500889 division Zürich # previously Zurich +Switzerland/190031_551_B3/2020 EPI_ISL_500894 division Zürich # previously Zurich +Switzerland/190032_551_C10/2020 EPI_ISL_500895 division Zürich # previously Zurich +Switzerland/190035_552_E8/2020 EPI_ISL_500898 division Zürich # previously Zurich +Switzerland/190038_554_D11/2020 EPI_ISL_500900 division Zürich # previously Zurich +Switzerland/190039_555_D3/2020 EPI_ISL_500901 division Zürich # previously Zurich +Switzerland/190053_559_G8/2020 EPI_ISL_500914 division Zürich # previously Zurich +Switzerland/190056_561_A3/2020 EPI_ISL_500917 division Zürich # previously Zurich +Switzerland/190016_541_E4/2020 EPI_ISL_500881 division Basel-Land # previously Basel-Landschaft +Switzerland/190034_551_E10/2020 EPI_ISL_500897 division Basel-Land # previously Basel-Landschaft +Switzerland/190036_552_E9/2020 EPI_ISL_500899 division Basel-Land # previously Basel-Landschaft +Switzerland/190047_558_D5/2020 EPI_ISL_500909 division Basel-Land # previously Basel-Landschaft +Switzerland/190049_558_H8/2020 EPI_ISL_500910 division Basel-Land # previously Basel-Landschaft +Switzerland/190050_559_B8/2020 EPI_ISL_500911 division Basel-Land # previously Basel-Landschaft +Switzerland/190051_559_D7/2020 EPI_ISL_500912 division Basel-Land # previously Basel-Landschaft +Switzerland/190052_559_E10/2020 EPI_ISL_500913 division Basel-Land # previously Basel-Landschaft +Switzerland/190055_560_F4/2020 EPI_ISL_500916 division Basel-Land # previously Basel-Landschaft +Switzerland/190059_563_G9/2020 EPI_ISL_500920 division Basel-Land # previously Basel-Landschaft +Switzerland/190060_564_C3/2020 EPI_ISL_500921 division Basel-Land # previously Basel-Landschaft +Switzerland/190061_564_F4/2020 EPI_ISL_500922 division Basel-Land # previously Basel-Landschaft +Switzerland/190071_570_D04/2020 EPI_ISL_500929 division Basel-Land # previously Basel-Landschaft +Switzerland/190075_571_D08/2020 EPI_ISL_500933 division Basel-Land # previously Basel-Landschaft +Switzerland/190076_572_D05/2020 EPI_ISL_500934 division Basel-Land # previously Basel-Landschaft +Switzerland/190078_573_C02/2020 EPI_ISL_500935 division Basel-Land # previously Basel-Landschaft +Switzerland/190083_576_A02/2020 EPI_ISL_500939 division Basel-Land # previously Basel-Landschaft +Switzerland/190086_577_G05/2020 EPI_ISL_500942 division Basel-Land # previously Basel-Landschaft +Switzerland/190090_580_A03/2020 EPI_ISL_500945 division Basel-Land # previously Basel-Landschaft +Switzerland/190064_565_C4/2020 EPI_ISL_500924 division Lucerne # previously Luzern +Switzerland/1000482982/2020 EPI_ISL_508864 division Zürich # previously Zurich +Switzerland/1000482983/2020 EPI_ISL_508865 division Zürich # previously Zurich +Switzerland/1000482984/2020 EPI_ISL_508866 division Zürich # previously Zurich +Switzerland/1000482985/2020 EPI_ISL_508867 division Zürich # previously Zurich +Switzerland/1000483258/2020 EPI_ISL_508868 division Zürich # previously Zurich +Switzerland/1000484569/2020 EPI_ISL_508869 division Zürich # previously Zurich +Switzerland/1000486784/2020 EPI_ISL_508870 division Zürich # previously Zurich +Switzerland/1000503309/2020 EPI_ISL_509222 division Zürich # previously Zurich +Switzerland/200000_581_C03/2020 EPI_ISL_510690 division Basel-Land # previously Basel-Landschaft +Switzerland/200001_581_E06/2020 EPI_ISL_510691 division Basel-Land # previously Basel-Landschaft +Switzerland/200004_583_F07/2020 EPI_ISL_510694 division Basel-Land # previously Basel-Landschaft +Switzerland/200006_583_F10/2020 EPI_ISL_510696 division Basel-Land # previously Basel-Landschaft +Switzerland/200012_587_A05/2020 EPI_ISL_510701 division Basel-Land # previously Basel-Landschaft +Switzerland/200015_589_E10/2020 EPI_ISL_510704 division Basel-Land # previously Basel-Landschaft +Switzerland/200018_592_A05/2020 EPI_ISL_510707 division Basel-Land # previously Basel-Landschaft +Switzerland/200024_595_C12/2020 EPI_ISL_510713 division Basel-Land # previously Basel-Landschaft +Switzerland/200036_603_A07/2020 EPI_ISL_510724 division Basel-Land # previously Basel-Landschaft +Switzerland/200038_604_G06/2020 EPI_ISL_510726 division Basel-Land # previously Basel-Landschaft +Switzerland/200039_604_H03/2020 EPI_ISL_510727 division Basel-Land # previously Basel-Landschaft +Switzerland/200045_608_C04/2020 EPI_ISL_510730 division Basel-Land # previously Basel-Landschaft +Switzerland/200052_612_E04/2020 EPI_ISL_510736 division Basel-Land # previously Basel-Landschaft +Switzerland/200053_612_G07/2020 EPI_ISL_510737 division Basel-Land # previously Basel-Landschaft +Switzerland/200056_614_D09/2020 EPI_ISL_510740 division Basel-Land # previously Basel-Landschaft +Switzerland/200059_616_A01/2020 EPI_ISL_510741 division Basel-Land # previously Basel-Landschaft +Switzerland/200062_617_G02/2020 EPI_ISL_510744 division Basel-Land # previously Basel-Landschaft +Switzerland/210006_627_E11/2020 EPI_ISL_510754 division Basel-Land # previously Basel-Landschaft +Switzerland/210007_627_G10/2020 EPI_ISL_510755 division Basel-Land # previously Basel-Landschaft +Switzerland/210008_627_G11/2020 EPI_ISL_510756 division Basel-Land # previously Basel-Landschaft +Switzerland/210018_633_C11/2020 EPI_ISL_510764 division Basel-Land # previously Basel-Landschaft +Switzerland/210019_633_E01/2020 EPI_ISL_510765 division Basel-Land # previously Basel-Landschaft +Switzerland/210041_642_C12/2020 EPI_ISL_510782 division Basel-Land # previously Basel-Landschaft +Switzerland/210050_649_D06/2020 EPI_ISL_510787 division Basel-Land # previously Basel-Landschaft +Switzerland/210056_651_C09/2020 EPI_ISL_510790 division Basel-Land # previously Basel-Landschaft +Switzerland/210064_656_E04/2020 EPI_ISL_510796 division Basel-Land # previously Basel-Landschaft +Switzerland/210071_662_B02/2020 EPI_ISL_510801 division Basel-Land # previously Basel-Landschaft +Switzerland/210074_663_B05/2020 EPI_ISL_510804 division Basel-Land # previously Basel-Landschaft +Switzerland/200016_590_H08/2020 EPI_ISL_510705 division Zürich # previously Zurich +Switzerland/200017_591_B01/2020 EPI_ISL_510706 division Zürich # previously Zurich +Switzerland/200019_593_C11/2020 EPI_ISL_510708 division Zürich # previously Zurich +Switzerland/200026_596_B07/2020 EPI_ISL_510715 division Zürich # previously Zurich +Switzerland/200027_596_B08/2020 EPI_ISL_510716 division Zürich # previously Zurich +Switzerland/200028_596_H11/2020 EPI_ISL_510717 division Zürich # previously Zurich +Switzerland/200033_600_A03/2020 EPI_ISL_510722 division Zürich # previously Zurich +Switzerland/200037_603_C11/2020 EPI_ISL_510725 division Zürich # previously Zurich +Switzerland/200047_609_D03/2020 EPI_ISL_510732 division Zürich # previously Zurich +Switzerland/200048_610_A01/2020 EPI_ISL_510733 division Zürich # previously Zurich +Switzerland/200054_613_G05/2020 EPI_ISL_510738 division Zürich # previously Zurich +Switzerland/200064_618_C08/2020 EPI_ISL_510745 division Zürich # previously Zurich +Switzerland/210004_626_D04/2020 EPI_ISL_510753 division Zürich # previously Zurich +Switzerland/210011_630_A01/2020 EPI_ISL_510758 division Zürich # previously Zurich +Switzerland/210012_630_A05/2020 EPI_ISL_510759 division Zürich # previously Zurich +Switzerland/210013_630_E01/2020 EPI_ISL_510760 division Zürich # previously Zurich +Switzerland/210021_634_D02/2020 EPI_ISL_510766 division Zürich # previously Zurich +Switzerland/210022_635_A07/2020 EPI_ISL_510767 division Zürich # previously Zurich +Switzerland/210023_635_C11/2020 EPI_ISL_510768 division Zürich # previously Zurich +Switzerland/210030_638_D05/2020 EPI_ISL_510772 division Zürich # previously Zurich +Switzerland/210032_639_D03/2020 EPI_ISL_510773 division Zürich # previously Zurich +Switzerland/210033_639_E09/2020 EPI_ISL_510774 division Zürich # previously Zurich +Switzerland/210034_639_G09/2020 EPI_ISL_510775 division Zürich # previously Zurich +Switzerland/210037_640_F02/2020 EPI_ISL_510778 division Zürich # previously Zurich +Switzerland/210047_646_D02/2020 EPI_ISL_510785 division Zürich # previously Zurich +Switzerland/210051_650_D02/2020 EPI_ISL_510788 division Zürich # previously Zurich +Switzerland/200029_597_A09/2020 EPI_ISL_510718 division Sankt Gallen # previously St Gallen +Switzerland/200068_620_H04/2020 EPI_ISL_510749 division Sankt Gallen # previously St Gallen +Switzerland/210009_628_H04/2020 EPI_ISL_510757 division Lucerne # previously Luzern Taiwan/2/2020 EPI_ISL_406031 location Kaohsiung Taiwan/2/2020 EPI_ISL_406031 division Taiwan Taiwan/3/2020 EPI_ISL_411926 location Taipei @@ -24653,11 +27016,9 @@ Taiwan/TSGH-38/2020 EPI_ISL_458029 division Taiwan # previously Taipei Thailand/61/2020 EPI_ISL_403962 division_exposure Hubei # GISAID Thailand/61/2020 EPI_ISL_403962 country_exposure China # GISAID Thailand/61/2020 EPI_ISL_403962 region_exposure Asia # GISAID -Thailand/61/2020 EPI_ISL_403962 location Bangkok Thailand/74/2020 EPI_ISL_403963 division_exposure Hubei # GISAID Thailand/74/2020 EPI_ISL_403963 country_exposure China # GISAID Thailand/74/2020 EPI_ISL_403963 region_exposure Asia # GISAID -Thailand/74/2020 EPI_ISL_403963 location Bangkok Thailand/Phatumthani_2980/2020 EPI_ISL_455584 division Pathum Thani Thailand/TNIC-1889/2020 EPI_ISL_430837 region_exposure Europe #GISAID Thailand/TNIC-1889/2020 EPI_ISL_430837 country_exposure Italy #GISAID @@ -24731,7 +27092,12 @@ Turkey/IMU-SP-04/2020 EPI_ISL_460619 region Europe # previously Asia Turkey/KOC-IST-B303/2020 EPI_ISL_478669 region Europe # previously Asia Turkey/KOC-IST-B91/2020 EPI_ISL_478670 region Europe # previously Asia Turkey/KOU-MG/2020 EPI_ISL_476832 region Europe # previously Asia +Turkey/KU-041/2020 EPI_ISL_495451 region_exposure Asia +Turkey/KU-041/2020 EPI_ISL_495451 country_exposure Kuwait +Turkey/KU-041/2020 EPI_ISL_495451 division_exposure Kuwait Turkey/VETAL1902_2/2020 EPI_ISL_455719 region Europe # previously Asia +Turkey/BUU/2020 EPI_ISL_510534 region Europe # previously Asia +Turkey/BUU434/2020 EPI_ISL_510533 region Europe # previously Asia USA/AK-PHL002/2020 EPI_ISL_420303 location Interior Alaska USA/AK-PHL003/2020 EPI_ISL_420304 location Interior Alaska USA/AK-PHL010/2020 EPI_ISL_431013 location Interior Alaska @@ -24772,11 +27138,11 @@ USA/CA-CDPH-UC26/2020 EPI_ISL_417330 location San Francisco USA/CA-CDPH-UC27/2020 EPI_ISL_417331 location San Francisco USA/CA-CDPH-UC28/2020 EPI_ISL_417332 location San Francisco USA/CA-CDPH-UC30/2020 EPI_ISL_429875 country_exposure USA # GISAID -USA/CA-CDPH-UC30/2020 EPI_ISL_429875 location Grand Princess cruise ship +USA/CA-CDPH-UC30/2020 EPI_ISL_429875 location Grand Princess Cruise Ship USA/CA-CDPH-UC30/2020 EPI_ISL_429875 region_exposure North America # GISAID USA/CA-CDPH-UC30/2020 EPI_ISL_429875 division_exposure Grand Princess 2nd cruise #GISAID USA/CA-CDPH-UC31/2020 EPI_ISL_429876 country_exposure USA # GISAID -USA/CA-CDPH-UC31/2020 EPI_ISL_429876 location Grand Princess cruise ship +USA/CA-CDPH-UC31/2020 EPI_ISL_429876 location Grand Princess Cruise Ship USA/CA-CDPH-UC31/2020 EPI_ISL_429876 region_exposure North America # GISAID USA/CA-CDPH-UC31/2020 EPI_ISL_429876 division_exposure Grand Princess 2nd cruise #GISAID USA/CA-CDPH-UC5/2020 EPI_ISL_413922 division Grand Princess # from GISAID @@ -25274,6 +27640,11 @@ USA/CT-UW-3470/2020 EPI_ISL_490987 division Connecticut # previously Ct USA/CT-NYUMC374/2020 EPI_ISL_430401 location Fairfield County CT # previously Fairfield County USA/CT-UW-510/2020 EPI_ISL_484885 location Fairfield County CT # previously Fairfield County USA/DC-CDC-0019/2020 EPI_ISL_447840 region North America +USA/DC-CDC-0019/2020 EPI_ISL_447840 division Washington DC # previously Washingtondc +USA/DC-CDC-1734/2020 EPI_ISL_436042 division Washington DC # previously Washingtondc +USA/DC-CDC-1738/2020 EPI_ISL_436043 division Washington DC # previously Washingtondc +USA/DC-CDC-9092/2020 EPI_ISL_436041 division Washington DC # previously Washingtondc +USA/DC-CDC-9096/2020 EPI_ISL_436040 division Washington DC # previously Washingtondc USA/DC-HP00006/2020 EPI_ISL_434687 division Washington DC #Change District of Columbia to Washington DC USA/DC-HP00007/2020 EPI_ISL_434688 division Washington DC USA/DC-HP00022/2020 EPI_ISL_434691 division Washington DC @@ -25289,6 +27660,42 @@ USA/DC-HP00090/2020 EPI_ISL_438243 division Washington DC USA/DC-HP00099/2020 EPI_ISL_438244 division Washington DC USA/DC-HP00100/2020 EPI_ISL_438245 division Washington DC USA/DC_0004/2020 EPI_ISL_424852 division Washington DC #Change District of Columbia to Washington DC +USA/DC-HP00035/2020 EPI_ISL_457753 division Washington DC +USA/DC-HP00049/2020 EPI_ISL_457793 division Washington DC +USA/DC-HP00052/2020 EPI_ISL_457796 division Washington DC +USA/DC-HP00054/2020 EPI_ISL_457797 division Washington DC +USA/DC-HP00059/2020 EPI_ISL_457801 division Washington DC +USA/DC-HP00063/2020 EPI_ISL_457805 division Washington DC +USA/DC-HP00091/2020 EPI_ISL_457757 division Washington DC +USA/DC-HP00096/2020 EPI_ISL_457760 division Washington DC +USA/DC-HP00116/2020 EPI_ISL_457809 division Washington DC +USA/DC-HP00117/2020 EPI_ISL_457810 division Washington DC +USA/DC-HP00122/2020 EPI_ISL_457814 division Washington DC +USA/DC-HP00135/2020 EPI_ISL_457822 division Washington DC +USA/DC-HP00137/2020 EPI_ISL_457823 division Washington DC +USA/DC-HP00138/2020 EPI_ISL_457770 division Washington DC 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+USA/DC-HP00135/2020 EPI_ISL_457822 division_exposure Washington DC +USA/DC-HP00137/2020 EPI_ISL_457823 division_exposure Washington DC +USA/DC-HP00138/2020 EPI_ISL_457770 division_exposure Washington DC +USA/DC-HP00139/2020 EPI_ISL_457771 division_exposure Washington DC +USA/DC-HP00145/2020 EPI_ISL_457775 division_exposure Washington DC +USA/DC-HP00146/2020 EPI_ISL_457776 division_exposure Washington DC +USA/DC-HP00152/2020 EPI_ISL_457781 division_exposure Washington DC USA/DW_COVID_33/2020 EPI_ISL_467301 country USA USA/DW_COVID_33/2020 EPI_ISL_467301 location St. Louis MO USA/DW_COVID_35/2020 EPI_ISL_467302 country USA @@ -25301,6 +27708,23 @@ USA/MO-WUSTL066/2020 EPI_ISL_476019 location St. Louis MO # previously St. Louis USA/MO-WUSTL032/2020 EPI_ISL_476021 location St. Louis MO # previously St. Louis USA/MO-WUSTL065/2020 EPI_ISL_476020 location St. Louis MO # previously St. Louis USA/MO-WUSTL070/2020 EPI_ISL_476018 location St. Louis MO # previously St. Louis +USA/MO-WUSTL031/2020 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EPI_ISL_492074 location Richland County SC # previously Richland County +USA/SC-USC-COM0003 EPI_ISL_493129 location Richland County SC # previously Richland County +USA/SC-USC-PH00796/2020 EPI_ISL_494558 location Richland County SC # previously Richland County +USA/SC-USC-PRG00427/2020 EPI_ISL_493212 location Richland County SC # previously Richland County +USA/SC-USC-PRG443/2020 EPI_ISL_493427 location Richland County SC # previously Richland County +USA/SC-USC-PRG467/2020 EPI_ISL_494553 location Richland County SC # previously Richland County +USA/SC-USC-PRG505/2020 EPI_ISL_494554 location Richland County SC # previously Richland County +USA/SC-USC-PRG507/2020 EPI_ISL_494555 location Richland County SC # previously Richland County +USA/SC-USC-USC00173/2020 EPI_ISL_493209 location Richland County SC # previously Richland County +USA/SC-USC-USC00431/2020 EPI_ISL_493426 location Richland County SC # previously Richland County +USA/SC-USC-USC00433/2020 EPI_ISL_493211 location Richland County SC # previously Richland County +USA/SC-USC-USC00437/2020 EPI_ISL_493210 location Richland County SC # previously Richland County +USA/SC-USC-COM511/2020 EPI_ISL_493130 location Richland County SC # previously Richland County +USA/SC-DHEC-0067/2020 EPI_ISL_510537 location Columbia SC # previously Columbia USA/SEARCH-0466-IPL/2020 EPI_ISL_483158 location Imperial County # previously Imperial USA/SEARCH-0486-IPL/2020 EPI_ISL_483173 location Imperial County # previously Imperial USA/SEARCH-0495-IPL/2020 EPI_ISL_483180 location Imperial County # previously Imperial @@ -27512,6 +30108,7 @@ USA/CA-CZB-2024/2020 EPI_ISL_486276 location Orange County CA # previously Orang USA/CA-CZB-2026/2020 EPI_ISL_486277 location Orange County CA # previously Orange County USA/CA-CZB-2030/2020 EPI_ISL_486278 location Orange County CA # previously Orange County USA/CA-CZB-2031/2020 EPI_ISL_486279 location Orange County CA # previously Orange County +USA/CA-ALSR-1289/2020 EPI_ISL_494482 location Imperial County # previously Imperial USA/IL-UW-478/2020 EPI_ISL_484853 location Winnebago County IL # previously Winnebago County USA/WI-UW-491/2020 EPI_ISL_484866 location Jefferson County WI # previously Jefferson County USA/WI-UW-522/2020 EPI_ISL_484897 location Brown County WI # previously Brown County @@ -27722,6 +30319,11 @@ Bahrein/Wuhan-Hu-1-4/2020 EPI_ISL_486889 division Bahrain # previously Bahrein Bahrein/Wuhan-Hu-1-2/2020 EPI_ISL_486887 country Bahrain # previously Bahrein Bahrein/Wuhan-Hu-1-3/2020 EPI_ISL_486888 country Bahrain # previously Bahrein Bahrein/Wuhan-Hu-1-4/2020 EPI_ISL_486889 country Bahrain # previously Bahrein +Bahrain/920268866/2020 EPI_ISL_510531 division Capital Governorate # previously false division Manama +Bahrain/920268866/2020 EPI_ISL_510531 location Manama +Bahrain/140008296/2020 EPI_ISL_510528 region Asia # previously Asian +Bahrain/140008296/2020 EPI_ISL_510528 division Capital Governorate # previously false division Manama +Bahrain/140008296/2020 EPI_ISL_510528 location Manama Israel/n14268/2020 EPI_ISL_483708 region Asia Israel/n14269/2020 EPI_ISL_483704 region Asia Israel/n14270/2020 EPI_ISL_483715 region Asia @@ -30168,6 +32770,8 @@ Austria/CeMM0002/2020 EPI_ISL_419655 title "Mutational dynamics and transmission Austria/CeMM0002/2020 EPI_ISL_419655 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0003/2020 EPI_ISL_419656 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0003/2020 EPI_ISL_419656 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/CeMM0004/2020 EPI_ISL_419657 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0004/2020 EPI_ISL_419657 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 Austria/CeMM0005/2020 EPI_ISL_419658 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0005/2020 EPI_ISL_419658 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0006/2020 EPI_ISL_419659 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" @@ -30178,6 +32782,8 @@ Austria/CeMM0008/2020 EPI_ISL_419661 title "Mutational dynamics and transmission Austria/CeMM0008/2020 EPI_ISL_419661 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0009/2020 EPI_ISL_419662 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0009/2020 EPI_ISL_419662 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/CeMM0010/2020 EPI_ISL_419663 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0010/2020 EPI_ISL_419663 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 Austria/CeMM0011/2020 EPI_ISL_419664 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0011/2020 EPI_ISL_419664 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0012/2020 EPI_ISL_419665 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" @@ -30186,6 +32792,8 @@ Austria/CeMM0013/2020 EPI_ISL_419666 title "Mutational dynamics and transmission Austria/CeMM0013/2020 EPI_ISL_419666 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0014/2020 EPI_ISL_419667 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0014/2020 EPI_ISL_419667 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/CeMM0015/2020 EPI_ISL_419668 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0015/2020 EPI_ISL_419668 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 Austria/CeMM0016/2020 EPI_ISL_419669 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0016/2020 EPI_ISL_419669 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0017/2020 EPI_ISL_419670 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" @@ -30206,6 +32814,8 @@ Austria/CeMM0025/2020 EPI_ISL_437915 title "Mutational dynamics and transmission Austria/CeMM0025/2020 EPI_ISL_437915 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0026/2020 EPI_ISL_437916 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0026/2020 EPI_ISL_437916 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/CeMM0027/2020 EPI_ISL_475763 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0027/2020 EPI_ISL_475763 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 Austria/CeMM0028/2020 EPI_ISL_437917 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0028/2020 EPI_ISL_437917 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0029/2020 EPI_ISL_437918 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" @@ -30238,10 +32848,14 @@ Austria/CeMM0043/2020 EPI_ISL_437931 title "Mutational dynamics and transmission Austria/CeMM0043/2020 EPI_ISL_437931 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0045/2020 EPI_ISL_437932 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0045/2020 EPI_ISL_437932 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/CeMM0046/2020 EPI_ISL_475764 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0046/2020 EPI_ISL_475764 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 Austria/CeMM0047/2020 EPI_ISL_437933 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0047/2020 EPI_ISL_437933 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0048/2020 EPI_ISL_437934 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0048/2020 EPI_ISL_437934 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/CeMM0051/2020 EPI_ISL_475765 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0051/2020 EPI_ISL_475765 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 Austria/CeMM0052/2020 EPI_ISL_437935 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0052/2020 EPI_ISL_437935 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0053/2020 EPI_ISL_437936 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" @@ -30250,6 +32864,10 @@ Austria/CeMM0055/2020 EPI_ISL_437937 title "Mutational dynamics and transmission Austria/CeMM0055/2020 EPI_ISL_437937 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0058/2020 EPI_ISL_437938 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0058/2020 EPI_ISL_437938 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/CeMM0059/2020 EPI_ISL_475766 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0059/2020 EPI_ISL_475766 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0060/2020 EPI_ISL_475767 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0060/2020 EPI_ISL_475767 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 Austria/CeMM0067/2020 EPI_ISL_437939 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0067/2020 EPI_ISL_437939 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0068/2020 EPI_ISL_437940 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" @@ -30260,6 +32878,8 @@ Austria/CeMM0073/2020 EPI_ISL_437942 title "Mutational dynamics and transmission Austria/CeMM0073/2020 EPI_ISL_437942 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0074/2020 EPI_ISL_437943 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0074/2020 EPI_ISL_437943 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/CeMM0075/2020 EPI_ISL_475768 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0075/2020 EPI_ISL_475768 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 Austria/CeMM0076/2020 EPI_ISL_437944 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0076/2020 EPI_ISL_437944 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0077/2020 EPI_ISL_437945 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" @@ -30324,6 +32944,8 @@ Austria/CeMM0116/2020 EPI_ISL_437974 title "Mutational dynamics and transmission Austria/CeMM0116/2020 EPI_ISL_437974 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0117/2020 EPI_ISL_437975 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0117/2020 EPI_ISL_437975 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/CeMM0118/2020 EPI_ISL_475769 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0118/2020 EPI_ISL_475769 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 Austria/CeMM0119/2020 EPI_ISL_437976 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0119/2020 EPI_ISL_437976 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0120/2020 EPI_ISL_437977 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" @@ -30424,6 +33046,8 @@ Austria/CeMM0183/2020 EPI_ISL_438025 title "Mutational dynamics and transmission Austria/CeMM0183/2020 EPI_ISL_438025 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0184/2020 EPI_ISL_438026 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0184/2020 EPI_ISL_438026 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/CeMM0187/2020 EPI_ISL_475770 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0187/2020 EPI_ISL_475770 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 Austria/CeMM0188/2020 EPI_ISL_438029 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0188/2020 EPI_ISL_438029 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0189/2020 EPI_ISL_438030 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" @@ -30488,6 +33112,8 @@ Austria/CeMM0225/2020 EPI_ISL_438059 title "Mutational dynamics and transmission Austria/CeMM0225/2020 EPI_ISL_438059 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0226/2020 EPI_ISL_438060 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0226/2020 EPI_ISL_438060 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/CeMM0227/2020 EPI_ISL_475771 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0227/2020 EPI_ISL_475771 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 Austria/CeMM0228/2020 EPI_ISL_438061 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0228/2020 EPI_ISL_438061 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0229/2020 EPI_ISL_438062 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" @@ -30498,6 +33124,8 @@ Austria/CeMM0232/2020 EPI_ISL_438064 title "Mutational dynamics and transmission Austria/CeMM0232/2020 EPI_ISL_438064 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0235/2020 EPI_ISL_438066 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0235/2020 EPI_ISL_438066 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/CeMM0236/2020 EPI_ISL_475772 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0236/2020 EPI_ISL_475772 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 Austria/CeMM0237/2020 EPI_ISL_438067 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0237/2020 EPI_ISL_438067 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0238/2020 EPI_ISL_438068 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" @@ -30572,52 +33200,196 @@ Austria/CeMM0292/2020 EPI_ISL_438116 title "Mutational dynamics and transmission Austria/CeMM0292/2020 EPI_ISL_438116 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0294/2020 EPI_ISL_438117 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0294/2020 EPI_ISL_438117 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/CeMM0299/2020 EPI_ISL_475775 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0299/2020 EPI_ISL_475775 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0301/2020 EPI_ISL_475777 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0301/2020 EPI_ISL_475777 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0303/2020 EPI_ISL_475778 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0303/2020 EPI_ISL_475778 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0304/2020 EPI_ISL_475779 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0304/2020 EPI_ISL_475779 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0305/2020 EPI_ISL_475780 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0305/2020 EPI_ISL_475780 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0307/2020 EPI_ISL_475781 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0307/2020 EPI_ISL_475781 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0308/2020 EPI_ISL_475782 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0308/2020 EPI_ISL_475782 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0320/2020 EPI_ISL_475791 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0320/2020 EPI_ISL_475791 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0321/2020 EPI_ISL_475792 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0321/2020 EPI_ISL_475792 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0324/2020 EPI_ISL_475794 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0324/2020 EPI_ISL_475794 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0326/2020 EPI_ISL_475795 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0326/2020 EPI_ISL_475795 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0337/2020 EPI_ISL_475800 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0337/2020 EPI_ISL_475800 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0346/2020 EPI_ISL_475806 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0346/2020 EPI_ISL_475806 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0347/2020 EPI_ISL_475807 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0347/2020 EPI_ISL_475807 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0349/2020 EPI_ISL_475808 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0349/2020 EPI_ISL_475808 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0350/2020 EPI_ISL_475809 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0350/2020 EPI_ISL_475809 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0351/2020 EPI_ISL_475810 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0351/2020 EPI_ISL_475810 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 +Austria/CeMM0352/2020 EPI_ISL_475811 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/CeMM0352/2020 EPI_ISL_475811 paper_url https://dx.doi.org/10.1101/2020.07.15.204339v1 Austria/CeMM0357/2020 EPI_ISL_438120 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0357/2020 EPI_ISL_438120 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Austria/CeMM0361/2020 EPI_ISL_438124 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" Austria/CeMM0361/2020 EPI_ISL_438124 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 -Austria/Graz-MUG1/2020 EPI_ISL_437197 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" -Austria/Graz-MUG1/2020 EPI_ISL_437197 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 -Austria/Graz-MUG11/2020 EPI_ISL_437300 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" -Austria/Graz-MUG11/2020 EPI_ISL_437300 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 -Austria/Graz-MUG15/2020 EPI_ISL_437301 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" -Austria/Graz-MUG15/2020 EPI_ISL_437301 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 -Austria/Graz-MUG16/2020 EPI_ISL_437302 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" -Austria/Graz-MUG16/2020 EPI_ISL_437302 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 -Austria/Graz-MUG17/2020 EPI_ISL_437303 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" -Austria/Graz-MUG17/2020 EPI_ISL_437303 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 -Austria/Graz-MUG2/2020 EPI_ISL_437198 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" -Austria/Graz-MUG2/2020 EPI_ISL_437198 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 -Austria/Graz-MUG3/2020 EPI_ISL_437199 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" -Austria/Graz-MUG3/2020 EPI_ISL_437199 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 -Austria/Graz-MUG4/2020 EPI_ISL_437200 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" -Austria/Graz-MUG4/2020 EPI_ISL_437200 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 -Austria/Graz-MUG5/2020 EPI_ISL_437201 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" -Austria/Graz-MUG5/2020 EPI_ISL_437201 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 -Austria/Graz-MUG6/2020 EPI_ISL_437202 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" -Austria/Graz-MUG6/2020 EPI_ISL_437202 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 -Austria/Graz-MUG7/2020 EPI_ISL_437203 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https://dx.doi.org/10.1101/2020.06.07.138800 +Bangladesh/BARJ-CVASU-CTG-506/2020 EPI_ISL_450342 title "Genetic analysis of SARS-CoV-2 isolates collected from Bangladesh: insights into the origin, mutation spectrum, and possible pathomechanism" +Bangladesh/BARJ-CVASU-CTG-506/2020 EPI_ISL_450342 paper_url https://dx.doi.org/10.1101/2020.06.07.138800 +Bangladesh/BARJ-CVASU-CTG-511/2020 EPI_ISL_450343 title "Genetic analysis of SARS-CoV-2 isolates collected from Bangladesh: insights into the origin, mutation spectrum, and possible pathomechanism" +Bangladesh/BARJ-CVASU-CTG-511/2020 EPI_ISL_450343 paper_url https://dx.doi.org/10.1101/2020.06.07.138800 +Bangladesh/BARJ-CVASU-CTG-517/2020 EPI_ISL_450344 title "Genetic analysis of SARS-CoV-2 isolates collected from Bangladesh: insights into the origin, mutation spectrum, and possible pathomechanism" +Bangladesh/BARJ-CVASU-CTG-517/2020 EPI_ISL_450344 paper_url https://dx.doi.org/10.1101/2020.06.07.138800 +Bangladesh/BARJ-CVASU-CTG-518/2020 EPI_ISL_450345 title "Genetic analysis of SARS-CoV-2 isolates collected from Bangladesh: insights into the origin, mutation spectrum, and possible pathomechanism" +Bangladesh/BARJ-CVASU-CTG-518/2020 EPI_ISL_450345 paper_url https://dx.doi.org/10.1101/2020.06.07.138800 Bangladesh/CHRF_0001/2020 EPI_ISL_437912 title "Complete Genome Sequence of a Novel Coronavirus (SARS-CoV-2) Isolate from Bangladesh" Bangladesh/CHRF_0001/2020 EPI_ISL_437912 paper_url https://dx.doi.org/10.1128/MRA.00568-20 Bangladesh/DNAS_CPH_427/2020 EPI_ISL_445215 title "Genetic analysis of SARS-CoV-2 isolates collected from Bangladesh: insights into the origin, mutation spectrum, and possible pathomechanism" @@ -30984,6 +33756,8 @@ Belgium/UGent-8/2020 EPI_ISL_425052 title "A phylodynamic workflow to rapidly ga Belgium/UGent-8/2020 EPI_ISL_425052 paper_url https://dx.doi.org/10.1101/2020.05.05.078758 Belgium/UGent-9/2020 EPI_ISL_425053 title "A phylodynamic workflow to rapidly gain insights into the dispersal history and dynamics of SARS-CoV-2 lineages" Belgium/UGent-9/2020 EPI_ISL_425053 paper_url https://dx.doi.org/10.1101/2020.05.05.078758 +Belgium/ULG-0184/2020 EPI_ISL_447127 title "A recurrent mutation at position 26,340 of SARS-CoV-2 is associated with failure of the E-gene qRT-PCR utilized in a commercial dual-target diagnostic assay" +Belgium/ULG-0184/2020 EPI_ISL_447127 paper_url https://jcm.asm.org/content/early/2020/07/17/JCM.01598-20 Belgium/ULG-10001/2020 EPI_ISL_421182 title "A phylodynamic workflow to rapidly gain insights into the dispersal history and dynamics of SARS-CoV-2 lineages" Belgium/ULG-10001/2020 EPI_ISL_421182 paper_url https://dx.doi.org/10.1101/2020.05.05.078758 Belgium/ULG-10003/2020 EPI_ISL_421183 title "A phylodynamic workflow to rapidly gain insights into the dispersal history and dynamics of SARS-CoV-2 lineages" @@ -31226,6 +34000,12 @@ Belgium/ULG-10143/2020 EPI_ISL_427387 title "A phylodynamic workflow to rapidly Belgium/ULG-10143/2020 EPI_ISL_427387 paper_url https://dx.doi.org/10.1101/2020.05.05.078758 Belgium/ULG-10144/2020 EPI_ISL_427388 title "A phylodynamic workflow to rapidly gain insights into the dispersal history and dynamics of SARS-CoV-2 lineages" Belgium/ULG-10144/2020 EPI_ISL_427388 paper_url https://dx.doi.org/10.1101/2020.05.05.078758 +Belgium/ULG-10145/2020 EPI_ISL_447137 title "A recurrent mutation at position 26,340 of SARS-CoV-2 is associated with failure of the E-gene qRT-PCR utilized in a commercial dual-target diagnostic assay" +Belgium/ULG-10145/2020 EPI_ISL_447137 paper_url https://jcm.asm.org/content/early/2020/07/17/JCM.01598-20 +Belgium/ULG-10146/2020 EPI_ISL_447138 title "A recurrent mutation at position 26,340 of SARS-CoV-2 is associated with failure of the E-gene qRT-PCR utilized in a commercial dual-target diagnostic assay" +Belgium/ULG-10146/2020 EPI_ISL_447138 paper_url https://jcm.asm.org/content/early/2020/07/17/JCM.01598-20 +Belgium/ULG-10169/2020 EPI_ISL_447139 title "A recurrent mutation at position 26,340 of SARS-CoV-2 is associated with failure of the E-gene qRT-PCR utilized in a commercial dual-target diagnostic assay" +Belgium/ULG-10169/2020 EPI_ISL_447139 paper_url https://jcm.asm.org/content/early/2020/07/17/JCM.01598-20 Belgium/ULG-2971/2020 EPI_ISL_416997 title "A phylodynamic workflow to rapidly gain insights into the dispersal history and dynamics of SARS-CoV-2 lineages" Belgium/ULG-2971/2020 EPI_ISL_416997 paper_url https://dx.doi.org/10.1101/2020.05.05.078758 Belgium/ULG-3000/2020 EPI_ISL_417004 title "A phylodynamic workflow to rapidly gain insights into the dispersal history and dynamics of SARS-CoV-2 lineages" @@ -31452,6 +34232,16 @@ Brazil/AC162535-IEC/2020 EPI_ISL_458139 title "Genomic surveillance of SARS-CoV- Brazil/AC162535-IEC/2020 EPI_ISL_458139 paper_url https://dx.doi.org/10.1101/2020.06.17.158006 Brazil/AL-837/2020 EPI_ISL_427292 title "Genomic surveillance of SARS-CoV-2 reveals community transmission of a major lineage during the early pandemic phase in Brazil" Brazil/AL-837/2020 EPI_ISL_427292 paper_url https://dx.doi.org/10.1101/2020.06.17.158006 +Brazil/AM0201/2020 EPI_ISL_470568 title "Evolution and epidemic spread of SARS-CoV-2 in Brazil" +Brazil/AM0201/2020 EPI_ISL_470568 paper_url https://dx.doi.org/10.1126/science.abd2161 +Brazil/AM0202/2020 EPI_ISL_470569 title "Evolution and epidemic spread of SARS-CoV-2 in Brazil" +Brazil/AM0202/2020 EPI_ISL_470569 paper_url https://dx.doi.org/10.1126/science.abd2161 +Brazil/AM0203/2020 EPI_ISL_470570 title "Evolution and epidemic spread of SARS-CoV-2 in Brazil" +Brazil/AM0203/2020 EPI_ISL_470570 paper_url https://dx.doi.org/10.1126/science.abd2161 +Brazil/AM0204/2020 EPI_ISL_470571 title "Evolution and epidemic spread of SARS-CoV-2 in Brazil" +Brazil/AM0204/2020 EPI_ISL_470571 paper_url https://dx.doi.org/10.1126/science.abd2161 +Brazil/AM0205/2020 EPI_ISL_470572 title "Evolution and epidemic spread of SARS-CoV-2 in Brazil" +Brazil/AM0205/2020 EPI_ISL_470572 paper_url https://dx.doi.org/10.1126/science.abd2161 Brazil/AMBR-02/2020 EPI_ISL_417034 title "COVID-19 in Latin America: Contrasting phylodynamic inference with epidemiological surveillance." Brazil/AMBR-02/2020 EPI_ISL_417034 paper_url https://dx.doi.org/10.1101/2020.05.23.20111443 Brazil/AP161167-IEC/2020 EPI_ISL_450873 title "Genomic surveillance of SARS-CoV-2 reveals community transmission of a major lineage during the early pandemic phase in Brazil" @@ -31470,6 +34260,8 @@ Brazil/BA-312/2020 EPI_ISL_415105 title "Genomic surveillance of SARS-CoV-2 reve Brazil/BA-312/2020 EPI_ISL_415105 paper_url https://dx.doi.org/10.1101/2020.06.17.158006 Brazil/BA-510/2020 EPI_ISL_427293 title "Genomic surveillance of SARS-CoV-2 reveals community transmission of a major lineage during the early pandemic phase in Brazil" Brazil/BA-510/2020 EPI_ISL_427293 paper_url https://dx.doi.org/10.1101/2020.06.17.158006 +Brazil/CE0206/2020 EPI_ISL_470573 title "Evolution and epidemic spread of SARS-CoV-2 in Brazil" +Brazil/CE0206/2020 EPI_ISL_470573 paper_url https://dx.doi.org/10.1126/science.abd2161 Brazil/CV1/2020 EPI_ISL_429664 title "The ongoing COVID-19 epidemic in Minas Gerais, Brazil: insights from epidemiological data and SARS-CoV-2 whole genome sequencing." Brazil/CV1/2020 EPI_ISL_429664 paper_url https://dx.doi.org/10.1101/2020.05.05.20091611 Brazil/CV11/2020 EPI_ISL_429673 title "The ongoing COVID-19 epidemic in Minas Gerais, Brazil: insights from epidemiological data and SARS-CoV-2 whole genome sequencing." @@ -31562,8 +34354,762 @@ Brazil/DF-891/2020 EPI_ISL_427298 title "Genomic surveillance of SARS-CoV-2 reve Brazil/DF-891/2020 EPI_ISL_427298 paper_url https://dx.doi.org/10.1101/2020.06.17.158006 Brazil/ES-225/2020 EPI_ISL_415128 title "Genomic surveillance of SARS-CoV-2 reveals community transmission of a major lineage during the early pandemic phase in Brazil" Brazil/ES-225/2020 EPI_ISL_415128 paper_url https://dx.doi.org/10.1101/2020.06.17.158006 +Brazil/GO0207/2020 EPI_ISL_470574 title "Evolution and epidemic spread of SARS-CoV-2 in Brazil" +Brazil/GO0207/2020 EPI_ISL_470574 paper_url https://dx.doi.org/10.1126/science.abd2161 +Brazil/GO0208/2020 EPI_ISL_470575 title "Evolution and epidemic spread of SARS-CoV-2 in Brazil" 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https://dx.doi.org/10.1126/science.abd2161 +Brazil/L10_CD144/2020 EPI_ISL_476174 title "Evolution and epidemic spread of SARS-CoV-2 in Brazil" +Brazil/L10_CD144/2020 EPI_ISL_476174 paper_url https://dx.doi.org/10.1126/science.abd2161 +Brazil/L10_CD145/2020 EPI_ISL_476175 title "Evolution and epidemic spread of SARS-CoV-2 in Brazil" +Brazil/L10_CD145/2020 EPI_ISL_476175 paper_url https://dx.doi.org/10.1126/science.abd2161 +Brazil/L10_CD147/2020 EPI_ISL_476176 title "Evolution and epidemic spread of SARS-CoV-2 in Brazil" +Brazil/L10_CD147/2020 EPI_ISL_476176 paper_url https://dx.doi.org/10.1126/science.abd2161 +Brazil/L10_CD150/2020 EPI_ISL_476177 title "Evolution and epidemic spread of SARS-CoV-2 in Brazil" +Brazil/L10_CD150/2020 EPI_ISL_476177 paper_url https://dx.doi.org/10.1126/science.abd2161 +Brazil/L10_CD154/2020 EPI_ISL_476178 title "Evolution and epidemic spread of SARS-CoV-2 in Brazil" +Brazil/L10_CD154/2020 EPI_ISL_476178 paper_url https://dx.doi.org/10.1126/science.abd2161 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https://virological.org/t/phylogenetic-analysis-of-sars-cov-2-in-drc/528 +DRC/KN-0059/2020 EPI_ISL_417439 title "Phylogenetic analysis of SARS-CoV-2 in DRC" +DRC/KN-0059/2020 EPI_ISL_417439 paper_url https://virological.org/t/phylogenetic-analysis-of-sars-cov-2-in-drc/528 +DRC/KN-0060/2020 EPI_ISL_417440 title "Phylogenetic analysis of SARS-CoV-2 in DRC" +DRC/KN-0060/2020 EPI_ISL_417440 paper_url https://virological.org/t/phylogenetic-analysis-of-sars-cov-2-in-drc/528 +DRC/KN-0070/2020 EPI_ISL_417441 title "Phylogenetic analysis of SARS-CoV-2 in DRC" +DRC/KN-0070/2020 EPI_ISL_417441 paper_url https://virological.org/t/phylogenetic-analysis-of-sars-cov-2-in-drc/528 +DRC/KN-0072/2020 EPI_ISL_417442 title "Phylogenetic analysis of SARS-CoV-2 in DRC" +DRC/KN-0072/2020 EPI_ISL_417442 paper_url https://virological.org/t/phylogenetic-analysis-of-sars-cov-2-in-drc/528 +DRC/KN-13/2020 EPI_ISL_414647 title "Phylogenetic analysis of SARS-CoV-2 in DRC" +DRC/KN-13/2020 EPI_ISL_414647 paper_url https://virological.org/t/phylogenetic-analysis-of-sars-cov-2-in-drc/528 Ecuador/HGSQ-USFQ-007/2020 EPI_ISL_422564 title "Genome sequencing of the first SARS-CoV-2 reported from patients with COVID-19 in Ecuador." Ecuador/HGSQ-USFQ-007/2020 EPI_ISL_422564 paper_url https://dx.doi.org/10.1101/2020.06.11.20128330 Ecuador/HGSQ-USFQ-010/2020 EPI_ISL_422565 title "Genome sequencing of the first SARS-CoV-2 reported from patients with COVID-19 in Ecuador." @@ -32106,6 +35994,9 @@ Egypt/NRC-01/2020 EPI_ISL_430820 title "SARS-CoV-2 Genome Analysis of Japanese T Egypt/NRC-01/2020 EPI_ISL_430820 paper_url https://dx.doi.org/10.3389/fmicb.2020.01316 Egypt/NRC-03/2020 EPI_ISL_430819 title "SARS-CoV-2 Genome Analysis of Japanese Travelers in Nile River Cruise" Egypt/NRC-03/2020 EPI_ISL_430819 paper_url https://dx.doi.org/10.3389/fmicb.2020.01316 +Egypt/HCoV2-Egy-002/2020 EPI_ISL_510532 region Africa # previously Asia +Egypt/Army-MCL001/2020 EPI_ISL_510526 division Faiyum # previously Fayoum +Egypt/HCoV2-Egy-002/2020 EPI_ISL_510532 division Faiyum # previously Fayoum England/01/2020 EPI_ISL_407071 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/01/2020 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https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-74377/2020 EPI_ISL_425282 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-74377/2020 EPI_ISL_425282 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-74386/2020 EPI_ISL_425283 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-74386/2020 EPI_ISL_425283 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-74395/2020 EPI_ISL_425284 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-74395/2020 EPI_ISL_425284 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-743D1/2020 EPI_ISL_425285 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" 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https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-74553/2020 EPI_ISL_425305 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-74553/2020 EPI_ISL_425305 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-74562/2020 EPI_ISL_425306 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-74562/2020 EPI_ISL_425306 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-74571/2020 EPI_ISL_425307 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-74571/2020 EPI_ISL_425307 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-74580/2020 EPI_ISL_425308 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" 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https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-74720/2020 EPI_ISL_425328 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-74720/2020 EPI_ISL_425328 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7473F/2020 EPI_ISL_425329 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7473F/2020 EPI_ISL_425329 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7474E/2020 EPI_ISL_425330 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7474E/2020 EPI_ISL_425330 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7475D/2020 EPI_ISL_425331 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" 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https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-74B9D/2020 EPI_ISL_425351 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-74B9D/2020 EPI_ISL_425351 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-74BAC/2020 EPI_ISL_425352 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-74BAC/2020 EPI_ISL_425352 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-74BBB/2020 EPI_ISL_425353 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-74BBB/2020 EPI_ISL_425353 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-74BCA/2020 EPI_ISL_425354 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" 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https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-74DE2/2020 EPI_ISL_425375 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-74DE2/2020 EPI_ISL_425375 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-74DF1/2020 EPI_ISL_425376 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-74DF1/2020 EPI_ISL_425376 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-74E0D/2020 EPI_ISL_425377 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-74E0D/2020 EPI_ISL_425377 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-74E49/2020 EPI_ISL_425378 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" 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https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-754EC/2020 EPI_ISL_425398 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-754EC/2020 EPI_ISL_425398 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-754FB/2020 EPI_ISL_425399 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-754FB/2020 EPI_ISL_425399 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-75507/2020 EPI_ISL_425400 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-75507/2020 EPI_ISL_425400 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-75516/2020 EPI_ISL_425401 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" 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SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-755BC/2020 EPI_ISL_425408 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-755CB/2020 EPI_ISL_425409 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-755CB/2020 EPI_ISL_425409 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-755DA/2020 EPI_ISL_425410 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-755DA/2020 EPI_ISL_425410 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-755E9/2020 EPI_ISL_425411 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-755E9/2020 EPI_ISL_425411 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-755F8/2020 EPI_ISL_425412 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-755F8/2020 EPI_ISL_425412 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-75604/2020 EPI_ISL_425413 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-75604/2020 EPI_ISL_425413 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-75613/2020 EPI_ISL_425414 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-75613/2020 EPI_ISL_425414 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-75622/2020 EPI_ISL_425415 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-75622/2020 EPI_ISL_425415 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-75631/2020 EPI_ISL_425416 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-75631/2020 EPI_ISL_425416 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-75640/2020 EPI_ISL_425417 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-75640/2020 EPI_ISL_425417 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7565F/2020 EPI_ISL_425418 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7565F/2020 EPI_ISL_425418 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7566E/2020 EPI_ISL_425419 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7566E/2020 EPI_ISL_425419 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7567D/2020 EPI_ISL_425420 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7567D/2020 EPI_ISL_425420 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7569B/2020 EPI_ISL_425421 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7569B/2020 EPI_ISL_425421 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-756AA/2020 EPI_ISL_425422 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-756AA/2020 EPI_ISL_425422 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76D1D/2020 EPI_ISL_425423 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76D1D/2020 EPI_ISL_425423 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76D3B/2020 EPI_ISL_425424 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76D3B/2020 EPI_ISL_425424 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76D59/2020 EPI_ISL_425425 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76D59/2020 EPI_ISL_425425 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76D77/2020 EPI_ISL_425426 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76D77/2020 EPI_ISL_425426 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76D95/2020 EPI_ISL_425427 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76D95/2020 EPI_ISL_425427 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76DB3/2020 EPI_ISL_425428 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76DB3/2020 EPI_ISL_425428 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76DD1/2020 EPI_ISL_425429 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76DD1/2020 EPI_ISL_425429 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76DFF/2020 EPI_ISL_425430 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76DFF/2020 EPI_ISL_425430 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76E1A/2020 EPI_ISL_425431 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76E1A/2020 EPI_ISL_425431 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76E38/2020 EPI_ISL_425432 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76E38/2020 EPI_ISL_425432 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76E56/2020 EPI_ISL_425433 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76E56/2020 EPI_ISL_425433 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76E74/2020 EPI_ISL_425434 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76E74/2020 EPI_ISL_425434 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76E92/2020 EPI_ISL_425435 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76E92/2020 EPI_ISL_425435 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76EB0/2020 EPI_ISL_425436 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76EB0/2020 EPI_ISL_425436 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76EDE/2020 EPI_ISL_425437 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76EDE/2020 EPI_ISL_425437 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76EFC/2020 EPI_ISL_425438 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76EFC/2020 EPI_ISL_425438 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76F17/2020 EPI_ISL_425439 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76F17/2020 EPI_ISL_425439 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76F35/2020 EPI_ISL_425440 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76F35/2020 EPI_ISL_425440 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76F62/2020 EPI_ISL_425441 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76F62/2020 EPI_ISL_425441 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76F71/2020 EPI_ISL_425442 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76F71/2020 EPI_ISL_425442 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76F9F/2020 EPI_ISL_425443 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76F9F/2020 EPI_ISL_425443 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76FAE/2020 EPI_ISL_425444 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76FAE/2020 EPI_ISL_425444 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76FBD/2020 EPI_ISL_425445 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76FBD/2020 EPI_ISL_425445 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76FCC/2020 EPI_ISL_425446 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76FCC/2020 EPI_ISL_425446 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76FDB/2020 EPI_ISL_425447 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76FDB/2020 EPI_ISL_425447 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76FEA/2020 EPI_ISL_425448 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76FEA/2020 EPI_ISL_425448 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-76FF9/2020 EPI_ISL_425449 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-76FF9/2020 EPI_ISL_425449 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-77004/2020 EPI_ISL_425450 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-77004/2020 EPI_ISL_425450 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-77013/2020 EPI_ISL_425451 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-77013/2020 EPI_ISL_425451 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-77022/2020 EPI_ISL_425452 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-77022/2020 EPI_ISL_425452 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-77031/2020 EPI_ISL_425453 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-77031/2020 EPI_ISL_425453 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-77040/2020 EPI_ISL_425454 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-77040/2020 EPI_ISL_425454 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7705F/2020 EPI_ISL_425455 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7705F/2020 EPI_ISL_425455 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7706E/2020 EPI_ISL_425456 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7706E/2020 EPI_ISL_425456 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7707D/2020 EPI_ISL_425457 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7707D/2020 EPI_ISL_425457 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7708C/2020 EPI_ISL_425458 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7708C/2020 EPI_ISL_425458 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7709B/2020 EPI_ISL_425459 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7709B/2020 EPI_ISL_425459 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-770B9/2020 EPI_ISL_425460 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-770B9/2020 EPI_ISL_425460 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-770C8/2020 EPI_ISL_425461 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-770C8/2020 EPI_ISL_425461 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-779FA/2020 EPI_ISL_433701 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-779FA/2020 EPI_ISL_433701 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78197/2020 EPI_ISL_433702 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78197/2020 EPI_ISL_433702 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-781A6/2020 EPI_ISL_433703 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-781A6/2020 EPI_ISL_433703 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-781B5/2020 EPI_ISL_433704 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-781B5/2020 EPI_ISL_433704 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-781E2/2020 EPI_ISL_433705 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-781E2/2020 EPI_ISL_433705 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7820D/2020 EPI_ISL_433706 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7820D/2020 EPI_ISL_433706 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7822B/2020 EPI_ISL_433707 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7822B/2020 EPI_ISL_433707 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78276/2020 EPI_ISL_433708 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78276/2020 EPI_ISL_433708 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78285/2020 EPI_ISL_433709 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78285/2020 EPI_ISL_433709 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78294/2020 EPI_ISL_433710 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78294/2020 EPI_ISL_433710 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-782A3/2020 EPI_ISL_433711 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-782A3/2020 EPI_ISL_433711 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-782B2/2020 EPI_ISL_433712 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-782B2/2020 EPI_ISL_433712 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-782D0/2020 EPI_ISL_433713 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-782D0/2020 EPI_ISL_433713 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-782EF/2020 EPI_ISL_433714 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-782EF/2020 EPI_ISL_433714 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-782FE/2020 EPI_ISL_433715 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-782FE/2020 EPI_ISL_433715 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7830A/2020 EPI_ISL_433716 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7830A/2020 EPI_ISL_433716 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78319/2020 EPI_ISL_433717 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78319/2020 EPI_ISL_433717 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78328/2020 EPI_ISL_433718 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78328/2020 EPI_ISL_433718 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78337/2020 EPI_ISL_433719 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78337/2020 EPI_ISL_433719 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78346/2020 EPI_ISL_433720 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78346/2020 EPI_ISL_433720 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78355/2020 EPI_ISL_433721 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78355/2020 EPI_ISL_433721 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78364/2020 EPI_ISL_433722 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78364/2020 EPI_ISL_433722 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78373/2020 EPI_ISL_433723 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78373/2020 EPI_ISL_433723 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78382/2020 EPI_ISL_433724 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78382/2020 EPI_ISL_433724 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78391/2020 EPI_ISL_433725 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78391/2020 EPI_ISL_433725 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-783BF/2020 EPI_ISL_433726 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-783BF/2020 EPI_ISL_433726 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-783CE/2020 EPI_ISL_433727 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-783CE/2020 EPI_ISL_433727 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-783DD/2020 EPI_ISL_433728 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-783DD/2020 EPI_ISL_433728 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-783EC/2020 EPI_ISL_433729 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-783EC/2020 EPI_ISL_433729 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-783FB/2020 EPI_ISL_433730 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-783FB/2020 EPI_ISL_433730 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78407/2020 EPI_ISL_433731 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78407/2020 EPI_ISL_433731 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78416/2020 EPI_ISL_433732 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78416/2020 EPI_ISL_433732 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78425/2020 EPI_ISL_433733 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78425/2020 EPI_ISL_433733 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78452/2020 EPI_ISL_433734 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78452/2020 EPI_ISL_433734 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78461/2020 EPI_ISL_433735 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78461/2020 EPI_ISL_433735 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78470/2020 EPI_ISL_433736 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78470/2020 EPI_ISL_433736 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7848F/2020 EPI_ISL_433737 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7848F/2020 EPI_ISL_433737 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7849E/2020 EPI_ISL_433738 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7849E/2020 EPI_ISL_433738 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-784AD/2020 EPI_ISL_433739 title "Rapid implementation of real-time 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"Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-784E9/2020 EPI_ISL_433743 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78504/2020 EPI_ISL_433744 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78504/2020 EPI_ISL_433744 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78531/2020 EPI_ISL_433745 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78531/2020 EPI_ISL_433745 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78540/2020 EPI_ISL_433746 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78540/2020 EPI_ISL_433746 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 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https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7859B/2020 EPI_ISL_433751 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7859B/2020 EPI_ISL_433751 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-785AA/2020 EPI_ISL_433752 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-785AA/2020 EPI_ISL_433752 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-785C8/2020 EPI_ISL_433753 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-785C8/2020 EPI_ISL_433753 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-785E6/2020 EPI_ISL_433754 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" 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"Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7872C/2020 EPI_ISL_433766 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7873B/2020 EPI_ISL_433767 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7873B/2020 EPI_ISL_433767 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7874A/2020 EPI_ISL_433768 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7874A/2020 EPI_ISL_433768 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78777/2020 EPI_ISL_433769 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78777/2020 EPI_ISL_433769 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 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https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-787D1/2020 EPI_ISL_433774 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-787D1/2020 EPI_ISL_433774 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-787E0/2020 EPI_ISL_433775 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-787E0/2020 EPI_ISL_433775 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7880B/2020 EPI_ISL_433776 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7880B/2020 EPI_ISL_433776 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7881A/2020 EPI_ISL_433777 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7881A/2020 EPI_ISL_433777 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78829/2020 EPI_ISL_433778 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78829/2020 EPI_ISL_433778 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78838/2020 EPI_ISL_433779 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78838/2020 EPI_ISL_433779 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78847/2020 EPI_ISL_433780 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78847/2020 EPI_ISL_433780 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78865/2020 EPI_ISL_433781 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate 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"Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-788ED/2020 EPI_ISL_433789 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-788FC/2020 EPI_ISL_433790 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-788FC/2020 EPI_ISL_433790 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78917/2020 EPI_ISL_433791 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78917/2020 EPI_ISL_433791 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78926/2020 EPI_ISL_433792 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78926/2020 EPI_ISL_433792 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 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https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78971/2020 EPI_ISL_433797 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78971/2020 EPI_ISL_433797 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-78980/2020 EPI_ISL_433798 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-78980/2020 EPI_ISL_433798 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7899F/2020 EPI_ISL_433799 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7899F/2020 EPI_ISL_433799 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-789AE/2020 EPI_ISL_433800 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-789AE/2020 EPI_ISL_433800 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-789BD/2020 EPI_ISL_433801 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-789BD/2020 EPI_ISL_433801 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-789CC/2020 EPI_ISL_433802 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-789CC/2020 EPI_ISL_433802 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-789DB/2020 EPI_ISL_433803 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-789DB/2020 EPI_ISL_433803 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-789EA/2020 EPI_ISL_433804 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate 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https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-79AC8/2020 EPI_ISL_433820 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-79AC8/2020 EPI_ISL_433820 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-79AD7/2020 EPI_ISL_433821 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-79AD7/2020 EPI_ISL_433821 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-79AE6/2020 EPI_ISL_433822 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-79AE6/2020 EPI_ISL_433822 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-79AF5/2020 EPI_ISL_433823 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" 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https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7AB3D/2020 EPI_ISL_433843 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7AB3D/2020 EPI_ISL_433843 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7AB79/2020 EPI_ISL_433844 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7AB79/2020 EPI_ISL_433844 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7AB88/2020 EPI_ISL_433845 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7AB88/2020 EPI_ISL_433845 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7AB97/2020 EPI_ISL_433846 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" 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https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7ACFE/2020 EPI_ISL_433866 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7ACFE/2020 EPI_ISL_433866 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7AD0A/2020 EPI_ISL_433867 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7AD0A/2020 EPI_ISL_433867 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7AD28/2020 EPI_ISL_433868 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7AD28/2020 EPI_ISL_433868 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7AD37/2020 EPI_ISL_433869 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" 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https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7AECB/2020 EPI_ISL_433889 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7AECB/2020 EPI_ISL_433889 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7AEDA/2020 EPI_ISL_433890 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7AEDA/2020 EPI_ISL_433890 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7AEE9/2020 EPI_ISL_433891 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7AEE9/2020 EPI_ISL_433891 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7AEF8/2020 EPI_ISL_433892 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" 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"Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7AFF5/2020 EPI_ISL_433904 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7B000/2020 EPI_ISL_433905 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7B000/2020 EPI_ISL_433905 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7B01F/2020 EPI_ISL_433906 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7B01F/2020 EPI_ISL_433906 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7B02E/2020 EPI_ISL_433907 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7B02E/2020 EPI_ISL_433907 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 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https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7B097/2020 EPI_ISL_433912 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7B097/2020 EPI_ISL_433912 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7B0A6/2020 EPI_ISL_433913 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7B0A6/2020 EPI_ISL_433913 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7B0B5/2020 EPI_ISL_433914 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7B0B5/2020 EPI_ISL_433914 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7B0C4/2020 EPI_ISL_433915 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" 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https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7B291/2020 EPI_ISL_433935 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7B291/2020 EPI_ISL_433935 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7B2A0/2020 EPI_ISL_433936 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7B2A0/2020 EPI_ISL_433936 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7B2BF/2020 EPI_ISL_433937 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7B2BF/2020 EPI_ISL_433937 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7B2CE/2020 EPI_ISL_433938 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" 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https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7B440/2020 EPI_ISL_433958 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7B440/2020 EPI_ISL_433958 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7B45F/2020 EPI_ISL_433959 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7B45F/2020 EPI_ISL_433959 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7B47D/2020 EPI_ISL_433960 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7B47D/2020 EPI_ISL_433960 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7B48C/2020 EPI_ISL_433961 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" 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https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7C02D/2020 EPI_ISL_433981 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7C02D/2020 EPI_ISL_433981 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7C03C/2020 EPI_ISL_433982 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7C03C/2020 EPI_ISL_433982 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7C04B/2020 EPI_ISL_433983 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" -England/CAMB-7C04B/2020 EPI_ISL_433983 paper_url https://dx.doi.org/10.1101/2020.05.08.20095687 -England/CAMB-7C05A/2020 EPI_ISL_433984 title "Rapid implementation of real-time SARS-CoV-2 sequencing to investigate healthcare-associated COVID-19 infections" 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https://dx.doi.org/10.1016/S1473-3099(20)30562-4 +England/CAMB-7FBA1/2020 EPI_ISL_433486 title "Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study" +England/CAMB-7FBA1/2020 EPI_ISL_433486 paper_url https://dx.doi.org/10.1016/S1473-3099(20)30562-4 +England/CAMB-7FBB0/2020 EPI_ISL_433487 title "Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study" +England/CAMB-7FBB0/2020 EPI_ISL_433487 paper_url https://dx.doi.org/10.1016/S1473-3099(20)30562-4 +England/CAMB-7FBCF/2020 EPI_ISL_433488 title "Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study" +England/CAMB-7FBCF/2020 EPI_ISL_433488 paper_url https://dx.doi.org/10.1016/S1473-3099(20)30562-4 +England/CAMB-7FBDE/2020 EPI_ISL_433489 title "Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study" +England/CAMB-7FBDE/2020 EPI_ISL_433489 paper_url https://dx.doi.org/10.1016/S1473-3099(20)30562-4 +England/CAMB-7FBFC/2020 EPI_ISL_433490 title "Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study" +England/CAMB-7FBFC/2020 EPI_ISL_433490 paper_url https://dx.doi.org/10.1016/S1473-3099(20)30562-4 +England/CAMB-7FC08/2020 EPI_ISL_433491 title "Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study" +England/CAMB-7FC08/2020 EPI_ISL_433491 paper_url https://dx.doi.org/10.1016/S1473-3099(20)30562-4 +England/CAMB-7FC17/2020 EPI_ISL_433492 title "Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study" +England/CAMB-7FC17/2020 EPI_ISL_433492 paper_url https://dx.doi.org/10.1016/S1473-3099(20)30562-4 +England/CAMB-7FC26/2020 EPI_ISL_433493 title "Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study" +England/CAMB-7FC26/2020 EPI_ISL_433493 paper_url https://dx.doi.org/10.1016/S1473-3099(20)30562-4 +England/CAMB-7FC35/2020 EPI_ISL_433494 title "Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study" +England/CAMB-7FC35/2020 EPI_ISL_433494 paper_url https://dx.doi.org/10.1016/S1473-3099(20)30562-4 +England/CAMB-7FC44/2020 EPI_ISL_433495 title "Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study" +England/CAMB-7FC44/2020 EPI_ISL_433495 paper_url https://dx.doi.org/10.1016/S1473-3099(20)30562-4 +England/CAMB-7FC53/2020 EPI_ISL_433496 title "Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study" +England/CAMB-7FC53/2020 EPI_ISL_433496 paper_url https://dx.doi.org/10.1016/S1473-3099(20)30562-4 +England/CAMB-7FC62/2020 EPI_ISL_433497 title "Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study" +England/CAMB-7FC62/2020 EPI_ISL_433497 paper_url https://dx.doi.org/10.1016/S1473-3099(20)30562-4 England/NP1/2020 EPI_ISL_479777 title "No evidence of viral polymorphisms associated with Paediatric Inflammatory Multisystem Syndrome Temporally Associated With SARS-CoV-2 (PIMS-TS)." England/NP1/2020 EPI_ISL_479777 paper_url https://dx.doi.org/10.1101/2020.07.07.20148213v1 England/NP2/2020 EPI_ISL_479778 title "No evidence of viral polymorphisms associated with Paediatric Inflammatory Multisystem Syndrome Temporally Associated With SARS-CoV-2 (PIMS-TS)." @@ -34224,6 +38115,12 @@ HongKong/HKPU92-1302/2020 EPI_ISL_419253 title "A territory-wide study of early HongKong/HKPU92-1302/2020 EPI_ISL_419253 paper_url https://dx.doi.org/10.1101/2020.03.30.20045740 HongKong/HKPU_2801/2020 EPI_ISL_417190 title "A territory-wide study of early COVID-19 outbreak in Hong Kong community: A clinical, epidemiological and phylogenomic investigation" HongKong/HKPU_2801/2020 EPI_ISL_417190 paper_url https://dx.doi.org/10.1101/2020.03.30.20045740 +HongKong/HKSH0003/2020 EPI_ISL_430018 title "Genome Sequences of SARS-CoV-2 Strains Detected in Hong Kong" +HongKong/HKSH0003/2020 EPI_ISL_430018 paper_url https://mra.asm.org/content/9/31/e00697-20 +HongKong/HKSH0004/2020 EPI_ISL_430063 title "Genome Sequences of SARS-CoV-2 Strains Detected in Hong Kong" +HongKong/HKSH0004/2020 EPI_ISL_430063 paper_url https://mra.asm.org/content/9/31/e00697-20 +HongKong/HKSH0007/2020 EPI_ISL_451957 title "Genome Sequences of SARS-CoV-2 Strains Detected in Hong Kong" +HongKong/HKSH0007/2020 EPI_ISL_451957 paper_url https://mra.asm.org/content/9/31/e00697-20 Iceland/1/2020 EPI_ISL_417535 title "Spread of SARS-CoV-2 in the Icelandic Population" Iceland/1/2020 EPI_ISL_417535 paper_url https://dx.doi.org/10.1056/NEJMoa2006100 Iceland/10/2020 EPI_ISL_417536 title "Spread of SARS-CoV-2 in the Icelandic Population" @@ -38324,8 +42221,8 @@ Mexico/Puebla-InDRE_05/2020 EPI_ISL_424672 title "Genomic analysis of early SARS Mexico/Puebla-InDRE_05/2020 EPI_ISL_424672 paper_url https://dx.doi.org/10.1101/2020.05.27.120402 Mexico/Queretaro-InDRE_04/2020 EPI_ISL_424670 title "Genomic analysis of early SARS-CoV-2 strains introduced in Mexico" Mexico/Queretaro-InDRE_04/2020 EPI_ISL_424670 paper_url https://dx.doi.org/10.1101/2020.05.27.120402 -Morocco/15N/2020 EPI_ISL_458150 title "Genetic Diversity and Genomic Epidemiology of SARS-COV-2 in Morocco" -Morocco/15N/2020 EPI_ISL_458150 paper_url https://dx.doi.org/10.1101/2020.06.23.165902 +Morocco/15N/2020 EPI_ISL_458150 title "SARS-CoV-2 Genome Sequence from Morocco, Obtained Using Ion AmpliSeq Technology" +Morocco/15N/2020 EPI_ISL_458150 paper_url https://dx.doi.org/10.1128/MRA.00690-20 Morocco/6887/2020 EPI_ISL_459965 title "Genetic Diversity and Genomic Epidemiology of SARS-COV-2 in Morocco" Morocco/6887/2020 EPI_ISL_459965 paper_url https://dx.doi.org/10.1101/2020.06.23.165902 Morocco/6888/2020 EPI_ISL_459966 title "Genetic Diversity and Genomic Epidemiology of SARS-COV-2 in Morocco" @@ -38846,6 +42743,634 @@ Nigeria/OY260-CV55/2020 EPI_ISL_487101 title "New SARS-CoV-2 Genomes from Nigeri Nigeria/OY260-CV55/2020 EPI_ISL_487101 paper_url https://virological.org/t/new-sars-cov-2-genomes-from-nigeria-reveals-dominance-of-viruses-with-spike-protein-mutation-d614g-and-additional-virus-lineages-in-circulation/527 Pakistan/Gilgit1/2020 EPI_ISL_417444 title "Insights into The Codon Usage Bias of 13 Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Isolates from Different Geo-locations" Pakistan/Gilgit1/2020 EPI_ISL_417444 paper_url http://biorxiv.org/lookup/doi/10.1101/2020.04.01.019463 +Panama/328677/2020 EPI_ISL_415152 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328677/2020 EPI_ISL_415152 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328688/2020 EPI_ISL_496603 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328688/2020 EPI_ISL_496603 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328706/2020 EPI_ISL_496604 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328706/2020 EPI_ISL_496604 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328709/2020 EPI_ISL_496605 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328709/2020 EPI_ISL_496605 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328710/2020 EPI_ISL_496606 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328710/2020 EPI_ISL_496606 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328719/2020 EPI_ISL_496607 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328719/2020 EPI_ISL_496607 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328721/2020 EPI_ISL_496608 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328721/2020 EPI_ISL_496608 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328723/2020 EPI_ISL_496609 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328723/2020 EPI_ISL_496609 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328726/2020 EPI_ISL_496610 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328726/2020 EPI_ISL_496610 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328733/2020 EPI_ISL_496611 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328733/2020 EPI_ISL_496611 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328774/2020 EPI_ISL_496612 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328774/2020 EPI_ISL_496612 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328844/2020 EPI_ISL_496613 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328844/2020 EPI_ISL_496613 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328848/2020 EPI_ISL_496614 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328848/2020 EPI_ISL_496614 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328927/2020 EPI_ISL_496615 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328927/2020 EPI_ISL_496615 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328933/2020 EPI_ISL_496616 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328933/2020 EPI_ISL_496616 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328941/2020 EPI_ISL_496617 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328941/2020 EPI_ISL_496617 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328944/2020 EPI_ISL_496618 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328944/2020 EPI_ISL_496618 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328971/2020 EPI_ISL_496619 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328971/2020 EPI_ISL_496619 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328972/2020 EPI_ISL_496620 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328972/2020 EPI_ISL_496620 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328980/2020 EPI_ISL_496621 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328980/2020 EPI_ISL_496621 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/328981/2020 EPI_ISL_496622 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/328981/2020 EPI_ISL_496622 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/329064/2020 EPI_ISL_496623 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/329064/2020 EPI_ISL_496623 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/329108/2020 EPI_ISL_496624 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/329108/2020 EPI_ISL_496624 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/329117/2020 EPI_ISL_496625 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/329117/2020 EPI_ISL_496625 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/329198/2020 EPI_ISL_496626 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/329198/2020 EPI_ISL_496626 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/329230/2020 EPI_ISL_496627 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/329230/2020 EPI_ISL_496627 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/329377/2020 EPI_ISL_496628 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/329377/2020 EPI_ISL_496628 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/329388/2020 EPI_ISL_496629 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/329388/2020 EPI_ISL_496629 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/329446/2020 EPI_ISL_496630 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/329446/2020 EPI_ISL_496630 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/329536/2020 EPI_ISL_496631 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/329536/2020 EPI_ISL_496631 paper_url https://www.medrxiv.org/content/10.1101/2020.07.31.20160929v1 +Panama/329546/2020 EPI_ISL_496632 title "Early transmission dynamics, spread, and genomic characterization of SARS-CoV-2 in Panama." +Panama/329546/2020 EPI_ISL_496632 paper_url 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"Evolutionary and genomic analysis of four SARS-CoV-2 isolates circulating in March 2020 in Sri Lanka; Additional evidence on multiple introduction and further transmission" +SriLanka/COV38/2020 EPI_ISL_428670 paper_url https://dx.doi.org/10.21203/rs.3.rs-44134/v1 +SriLanka/COV486/2020 EPI_ISL_428673 title "Evolutionary and genomic analysis of four SARS-CoV-2 isolates circulating in March 2020 in Sri Lanka; Additional evidence on multiple introduction and further transmission" +SriLanka/COV486/2020 EPI_ISL_428673 paper_url https://dx.doi.org/10.21203/rs.3.rs-44134/v1 +SriLanka/COV53/2020 EPI_ISL_428671 title "Evolutionary and genomic analysis of four SARS-CoV-2 isolates circulating in March 2020 in Sri Lanka; Additional evidence on multiple introduction and further transmission" +SriLanka/COV53/2020 EPI_ISL_428671 paper_url https://dx.doi.org/10.21203/rs.3.rs-44134/v1 +SriLanka/COV91/2020 EPI_ISL_428672 title "Evolutionary and genomic analysis of four SARS-CoV-2 isolates circulating in March 2020 in Sri Lanka; Additional evidence on multiple introduction and further transmission" +SriLanka/COV91/2020 EPI_ISL_428672 paper_url https://dx.doi.org/10.21203/rs.3.rs-44134/v1 Sweden/01/2020 EPI_ISL_411951 title "Whole genome and phylogenetic analysis of two SARS-CoV-2 strains isolated in Italy in January and February 2020: additional clues on multiple introductions and further circulation in Europe" Sweden/01/2020 EPI_ISL_411951 paper_url https://dx.doi.org/10.2807/1560-7917.ES.2020.25.13.2000305 Switzerland/1000477377/2020 EPI_ISL_413020 title "Phylodynamic Analyses based on 11 genomes from the Italian outbreak" @@ -41432,6 +46235,362 @@ USA/NY1-PV08001/2020 EPI_ISL_414476 title "Introductions and early spread of SAR USA/NY1-PV08001/2020 EPI_ISL_414476 paper_url https://dx.doi.org/10.1101/2020.04.08.20056929 USA/NY2-PV08100/2020 EPI_ISL_415151 title "Introductions and early spread of SARS-CoV-2 in the New York City area" USA/NY2-PV08100/2020 EPI_ISL_415151 paper_url 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+USA/OR-PROV-228/2020 EPI_ISL_482463 title "Genomic heterogeneity and clinical characterization of SARS-CoV-2 in Oregon" +USA/OR-PROV-228/2020 EPI_ISL_482463 paper_url https://www.medrxiv.org/content/10.1101/2020.07.30.20160069v1 +USA/OR-PROV-229/2020 EPI_ISL_482464 title "Genomic heterogeneity and clinical characterization of SARS-CoV-2 in Oregon" +USA/OR-PROV-229/2020 EPI_ISL_482464 paper_url https://www.medrxiv.org/content/10.1101/2020.07.30.20160069v1 +USA/OR-PROV-230/2020 EPI_ISL_482465 title "Genomic heterogeneity and clinical characterization of SARS-CoV-2 in Oregon" +USA/OR-PROV-230/2020 EPI_ISL_482465 paper_url https://www.medrxiv.org/content/10.1101/2020.07.30.20160069v1 +USA/OR-PROV-231/2020 EPI_ISL_482466 title "Genomic heterogeneity and clinical characterization of SARS-CoV-2 in Oregon" +USA/OR-PROV-231/2020 EPI_ISL_482466 paper_url https://www.medrxiv.org/content/10.1101/2020.07.30.20160069v1 +USA/OR-PROV-232/2020 EPI_ISL_482467 title "Genomic heterogeneity and clinical characterization of SARS-CoV-2 in Oregon" +USA/OR-PROV-232/2020 EPI_ISL_482467 paper_url https://www.medrxiv.org/content/10.1101/2020.07.30.20160069v1 USA/TX-HMH01/2020 EPI_ISL_434712 title "Molecular Architecture of Early Dissemination and Evolution of the SARS-CoV-2 Virus in Metropolitan Houston, Texas" USA/TX-HMH01/2020 EPI_ISL_434712 paper_url https://dx.doi.org/10.1101/2020.05.01.072652 USA/TX-HMH010/2020 EPI_ISL_434721 title "Molecular Architecture of Early Dissemination and Evolution of the SARS-CoV-2 Virus in Metropolitan Houston, Texas" @@ -43240,8 +48399,6 @@ USA/WI-UW-345/2020 EPI_ISL_436639 title "Distinct patterns of SARS-CoV-2 transmi USA/WI-UW-345/2020 EPI_ISL_436639 paper_url https://www.medrxiv.org/content/10.1101/2020.07.09.20149104v1 USA/WI-UW-346/2020 EPI_ISL_436640 title "Distinct patterns of SARS-CoV-2 transmission in two nearby communities in Wisconsin, USA" USA/WI-UW-346/2020 EPI_ISL_436640 paper_url https://www.medrxiv.org/content/10.1101/2020.07.09.20149104v1 -USA/WI-UW-347/2020 EPI_ISL_450701 title "Distinct patterns of SARS-CoV-2 transmission in two nearby communities in Wisconsin, USA" -USA/WI-UW-347/2020 EPI_ISL_450701 paper_url https://www.medrxiv.org/content/10.1101/2020.07.09.20149104v1 USA/WI-UW-35/2020 EPI_ISL_421293 title "Distinct patterns of SARS-CoV-2 transmission in two nearby communities in Wisconsin, USA" USA/WI-UW-35/2020 EPI_ISL_421293 paper_url https://www.medrxiv.org/content/10.1101/2020.07.09.20149104v1 USA/WI-UW-351/2020 EPI_ISL_450705 title "Distinct patterns of SARS-CoV-2 transmission in two nearby communities in Wisconsin, USA" @@ -43596,6 +48753,32 @@ mink/Netherlands/NB04_index/2020 EPI_ISL_447634 title "SARS-CoV-2 infection in f mink/Netherlands/NB04_index/2020 EPI_ISL_447634 paper_url https://dx.doi.org/10.2807/1560-7917.ES.2020.25.23.2001005 tiger/USA/NY-040420/2020 EPI_ISL_420293 title "The risk of SARS-CoV-2 transmission to pets and other wild and domestic animals strongly mandates a one-health strategy to control the COVID-19 pandemic" tiger/USA/NY-040420/2020 EPI_ISL_420293 paper_url https://dx.doi.org/10.1016/j.onehlt.2020.100133 +Austria/Graz-MUG1/2020 EPI_ISL_437197 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/Graz-MUG1/2020 EPI_ISL_437197 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/Graz-MUG11/2020 EPI_ISL_437300 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/Graz-MUG11/2020 EPI_ISL_437300 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/Graz-MUG15/2020 EPI_ISL_437301 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/Graz-MUG15/2020 EPI_ISL_437301 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/Graz-MUG16/2020 EPI_ISL_437302 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/Graz-MUG16/2020 EPI_ISL_437302 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/Graz-MUG17/2020 EPI_ISL_437303 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/Graz-MUG17/2020 EPI_ISL_437303 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/Graz-MUG2/2020 EPI_ISL_437198 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/Graz-MUG2/2020 EPI_ISL_437198 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/Graz-MUG3/2020 EPI_ISL_437199 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/Graz-MUG3/2020 EPI_ISL_437199 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/Graz-MUG4/2020 EPI_ISL_437200 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/Graz-MUG4/2020 EPI_ISL_437200 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/Graz-MUG5/2020 EPI_ISL_437201 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/Graz-MUG5/2020 EPI_ISL_437201 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/Graz-MUG6/2020 EPI_ISL_437202 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/Graz-MUG6/2020 EPI_ISL_437202 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/Graz-MUG7/2020 EPI_ISL_437203 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/Graz-MUG7/2020 EPI_ISL_437203 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/Graz-MUG8/2020 EPI_ISL_437298 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/Graz-MUG8/2020 EPI_ISL_437298 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 +Austria/Graz-MUG9/2020 EPI_ISL_437299 title "Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria" +Austria/Graz-MUG9/2020 EPI_ISL_437299 paper_url https://www.biorxiv.org/content/10.1101/2020.07.15.204339v1 Australia/NSW09/2020 EPI_ISL_413595 title "Revealing COVID-19 transmission in Australia by SARS-CoV-2 genome sequencing and agent-based modeling" Australia/NSW09/2020 EPI_ISL_413595 paper_url https://www.nature.com/articles/s41591-020-1000-7 Australia/NSW219/2020 EPI_ISL_427643 title "Revealing COVID-19 transmission in Australia by SARS-CoV-2 genome sequencing and agent-based modeling" @@ -56502,8 +61685,6 @@ England/EXET-135A5E/2020 EPI_ISL_457129 title "Preliminary analysis of SARS-CoV- England/EXET-135A5E/2020 EPI_ISL_457129 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/20140070604/2020 EPI_ISL_423409 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/20140070604/2020 EPI_ISL_423409 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Scotland/EDB4718/2020 EPI_ISL_453134 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Scotland/EDB4718/2020 EPI_ISL_453134 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-7FD7E/2020 EPI_ISL_444410 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-7FD7E/2020 EPI_ISL_444410 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/NORW-E8314/2020 EPI_ISL_449141 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -58294,8 +63475,6 @@ England/CAMB-7EC36/2020 EPI_ISL_443050 title "Preliminary analysis of SARS-CoV-2 England/CAMB-7EC36/2020 EPI_ISL_443050 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/201320316/2020 EPI_ISL_423770 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/201320316/2020 EPI_ISL_423770 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Scotland/CVR809/2020 EPI_ISL_439116 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Scotland/CVR809/2020 EPI_ISL_439116 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/CVR1422/2020 EPI_ISL_433578 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/CVR1422/2020 EPI_ISL_433578 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/LIVE-9B5CF/2020 EPI_ISL_449466 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -59520,8 +64699,6 @@ Scotland/CVR3474/2020 EPI_ISL_456868 title "Preliminary analysis of SARS-CoV-2 i Scotland/CVR3474/2020 EPI_ISL_456868 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/BIRM-5E7FF/2020 EPI_ISL_444304 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/BIRM-5E7FF/2020 EPI_ISL_444304 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/LIVE-9B95A/2020 EPI_ISL_440888 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/LIVE-9B95A/2020 EPI_ISL_440888 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/CVR3095/2020 EPI_ISL_449185 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/CVR3095/2020 EPI_ISL_449185 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/20134003104/2020 EPI_ISL_423056 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -64912,8 +70089,6 @@ Wales/PHW04/2020 EPI_ISL_415041 title "Preliminary analysis of SARS-CoV-2 import Wales/PHW04/2020 EPI_ISL_415041 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-7667C/2020 EPI_ISL_439394 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-7667C/2020 EPI_ISL_439394 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Wales/PHWC-2BBC2/2020 EPI_ISL_445818 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Wales/PHWC-2BBC2/2020 EPI_ISL_445818 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB4712/2020 EPI_ISL_449328 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/EDB4712/2020 EPI_ISL_449328 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/NORW-EBA49/2020 EPI_ISL_457468 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -67756,8 +72931,6 @@ England/EXET-135D28/2020 EPI_ISL_457159 title "Preliminary analysis of SARS-CoV- England/EXET-135D28/2020 EPI_ISL_457159 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-2E1FA/2020 EPI_ISL_446071 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-2E1FA/2020 EPI_ISL_446071 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Scotland/EDB3652/2020 EPI_ISL_439304 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Scotland/EDB3652/2020 EPI_ISL_439304 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/LIVE-9D572/2020 EPI_ISL_453211 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/LIVE-9D572/2020 EPI_ISL_453211 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/20126007202/2020 EPI_ISL_418752 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -68110,8 +73283,6 @@ Wales/PHWC-28EEA/2020 EPI_ISL_445458 title "Preliminary analysis of SARS-CoV-2 i Wales/PHWC-28EEA/2020 EPI_ISL_445458 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-794AC/2020 EPI_ISL_441133 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-794AC/2020 EPI_ISL_441133 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Scotland/EDB4323/2020 EPI_ISL_453120 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Scotland/EDB4323/2020 EPI_ISL_453120 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB3895/2020 EPI_ISL_439359 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/EDB3895/2020 EPI_ISL_439359 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/SHEF-C1FB3/2020 EPI_ISL_457590 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -69806,8 +74977,6 @@ England/SHEF-D0F57/2020 EPI_ISL_457679 title "Preliminary analysis of SARS-CoV-2 England/SHEF-D0F57/2020 EPI_ISL_457679 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-26E19/2020 EPI_ISL_422044 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-26E19/2020 EPI_ISL_422044 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/BRIS-125B4F/2020 EPI_ISL_443916 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/BRIS-125B4F/2020 EPI_ISL_443916 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/CVR3439/2020 EPI_ISL_456852 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/CVR3439/2020 EPI_ISL_456852 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/LIVE-9BDC7/2020 EPI_ISL_440919 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -70170,8 +75339,6 @@ England/OXON-AC604/2020 EPI_ISL_448467 title "Preliminary analysis of SARS-CoV-2 England/OXON-AC604/2020 EPI_ISL_448467 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-7B686/2020 EPI_ISL_441083 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-7B686/2020 EPI_ISL_441083 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/BRIS-122456/2020 EPI_ISL_440630 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/BRIS-122456/2020 EPI_ISL_440630 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 NorthernIreland/NIRE-FA670/2020 EPI_ISL_441775 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" NorthernIreland/NIRE-FA670/2020 EPI_ISL_441775 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB1683/2020 EPI_ISL_433117 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -70434,8 +75601,6 @@ England/20124012702/2020 EPI_ISL_418698 title "Preliminary analysis of SARS-CoV- England/20124012702/2020 EPI_ISL_418698 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-756D7/2020 EPI_ISL_440441 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-756D7/2020 EPI_ISL_440441 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/CAMB-765AC/2020 EPI_ISL_439471 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/CAMB-765AC/2020 EPI_ISL_439471 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-1B20DF/2020 EPI_ISL_453004 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-1B20DF/2020 EPI_ISL_453004 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/BRIS-1251C5/2020 EPI_ISL_443805 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -70470,8 +75635,6 @@ Scotland/CVR3199/2020 EPI_ISL_449219 title "Preliminary analysis of SARS-CoV-2 i Scotland/CVR3199/2020 EPI_ISL_449219 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/NOTT-10FD45/2020 EPI_ISL_441439 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/NOTT-10FD45/2020 EPI_ISL_441439 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Scotland/CVR956/2020 EPI_ISL_439138 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Scotland/CVR956/2020 EPI_ISL_439138 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-7D1A1/2020 EPI_ISL_442316 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-7D1A1/2020 EPI_ISL_442316 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-843B0/2020 EPI_ISL_443574 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -70928,8 +76091,6 @@ Wales/PHWC-2415E/2020 EPI_ISL_418149 title "Preliminary analysis of SARS-CoV-2 i Wales/PHWC-2415E/2020 EPI_ISL_418149 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/BRIS-124955/2020 EPI_ISL_443745 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/BRIS-124955/2020 EPI_ISL_443745 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Wales/PHWC-270C7/2020 EPI_ISL_422133 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Wales/PHWC-270C7/2020 EPI_ISL_422133 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-8275C/2020 EPI_ISL_443684 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-8275C/2020 EPI_ISL_443684 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-71C51/2020 EPI_ISL_439617 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -71012,8 +76173,6 @@ England/NOTT-11041F/2020 EPI_ISL_441513 title "Preliminary analysis of SARS-CoV- England/NOTT-11041F/2020 EPI_ISL_441513 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB4226/2020 EPI_ISL_456938 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/EDB4226/2020 EPI_ISL_456938 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Scotland/CVR58/2020 EPI_ISL_425788 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Scotland/CVR58/2020 EPI_ISL_425788 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-724A3/2020 EPI_ISL_439895 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-724A3/2020 EPI_ISL_439895 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-76C89/2020 EPI_ISL_438306 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -71130,8 +76289,6 @@ England/NOTT-10F46E/2020 EPI_ISL_433007 title "Preliminary analysis of SARS-CoV- England/NOTT-10F46E/2020 EPI_ISL_433007 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-286D3/2020 EPI_ISL_432355 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-286D3/2020 EPI_ISL_432355 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Scotland/EDB2416/2020 EPI_ISL_439204 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Scotland/EDB2416/2020 EPI_ISL_439204 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/NORW-EAEA8/2020 EPI_ISL_457389 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/NORW-EAEA8/2020 EPI_ISL_457389 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/LOND-D3D87/2020 EPI_ISL_449650 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -71176,8 +76333,6 @@ England/CAMB-75A44/2020 EPI_ISL_438504 title "Preliminary analysis of SARS-CoV-2 England/CAMB-75A44/2020 EPI_ISL_438504 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/20131104704/2020 EPI_ISL_423698 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/20131104704/2020 EPI_ISL_423698 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Wales/PHWC-33E46/2020 EPI_ISL_446829 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Wales/PHWC-33E46/2020 EPI_ISL_446829 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-1ABFBE/2020 EPI_ISL_444355 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-1ABFBE/2020 EPI_ISL_444355 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB2090/2020 EPI_ISL_433189 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -71192,8 +76347,6 @@ England/20139042804/2020 EPI_ISL_420676 title "Preliminary analysis of SARS-CoV- England/20139042804/2020 EPI_ISL_420676 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-826C8/2020 EPI_ISL_443456 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-826C8/2020 EPI_ISL_443456 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Wales/PHWC-279DB/2020 EPI_ISL_432052 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Wales/PHWC-279DB/2020 EPI_ISL_432052 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/EXET-13548D/2020 EPI_ISL_457064 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/EXET-13548D/2020 EPI_ISL_457064 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/CVR3167/2020 EPI_ISL_456767 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -71204,8 +76357,6 @@ England/CAMB-7C95F/2020 EPI_ISL_442190 title "Preliminary analysis of SARS-CoV-2 England/CAMB-7C95F/2020 EPI_ISL_442190 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/BRIS-123895/2020 EPI_ISL_442808 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/BRIS-123895/2020 EPI_ISL_442808 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/CAMB-1AD14D/2020 EPI_ISL_447970 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/CAMB-1AD14D/2020 EPI_ISL_447970 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-7A0D4/2020 EPI_ISL_441245 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-7A0D4/2020 EPI_ISL_441245 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/NOTT-10E308/2020 EPI_ISL_425527 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -71214,8 +76365,6 @@ England/NORW-E7EBA/2020 EPI_ISL_449095 title "Preliminary analysis of SARS-CoV-2 England/NORW-E7EBA/2020 EPI_ISL_449095 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-7BF5E/2020 EPI_ISL_442159 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-7BF5E/2020 EPI_ISL_442159 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/SHEF-CBB1F/2020 EPI_ISL_442396 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/SHEF-CBB1F/2020 EPI_ISL_442396 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/CVR1425/2020 EPI_ISL_438805 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/CVR1425/2020 EPI_ISL_438805 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-25032/2020 EPI_ISL_420946 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -71228,8 +76377,6 @@ England/20126026202/2020 EPI_ISL_418759 title "Preliminary analysis of SARS-CoV- England/20126026202/2020 EPI_ISL_418759 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB1541/2020 EPI_ISL_433077 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/EDB1541/2020 EPI_ISL_433077 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/SHEF-C14C3/2020 EPI_ISL_448829 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/SHEF-C14C3/2020 EPI_ISL_448829 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-290F2/2020 EPI_ISL_445481 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-290F2/2020 EPI_ISL_445481 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-7FE3F/2020 EPI_ISL_444422 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -71242,8 +76389,6 @@ England/CAMB-72D5D/2020 EPI_ISL_439958 title "Preliminary analysis of SARS-CoV-2 England/CAMB-72D5D/2020 EPI_ISL_439958 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-28785/2020 EPI_ISL_431990 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-28785/2020 EPI_ISL_431990 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/OXON-AE417/2020 EPI_ISL_448690 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/OXON-AE417/2020 EPI_ISL_448690 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/201360131/2020 EPI_ISL_423221 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/201360131/2020 EPI_ISL_423221 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/BRIS-1252E0/2020 EPI_ISL_444020 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -71262,12 +76407,38 @@ England/NOTT-1105D0/2020 EPI_ISL_441534 title "Preliminary analysis of SARS-CoV- England/NOTT-1105D0/2020 EPI_ISL_441534 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-76CD4/2020 EPI_ISL_438368 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-76CD4/2020 EPI_ISL_438368 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/20134069004/2020 EPI_ISL_423161 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/20134069004/2020 EPI_ISL_423161 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Scotland/CVR809/2020 EPI_ISL_439116 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Scotland/CVR809/2020 EPI_ISL_439116 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/LIVE-9B95A/2020 EPI_ISL_440888 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/LIVE-9B95A/2020 EPI_ISL_440888 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Wales/PHWC-2BBC2/2020 EPI_ISL_445818 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Wales/PHWC-2BBC2/2020 EPI_ISL_445818 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/BRIS-125B4F/2020 EPI_ISL_443916 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/BRIS-125B4F/2020 EPI_ISL_443916 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Wales/PHWC-270C7/2020 EPI_ISL_422133 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Wales/PHWC-270C7/2020 EPI_ISL_422133 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Scotland/CVR58/2020 EPI_ISL_425788 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Scotland/CVR58/2020 EPI_ISL_425788 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Scotland/EDB2416/2020 EPI_ISL_439204 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Scotland/EDB2416/2020 EPI_ISL_439204 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Wales/PHWC-33E46/2020 EPI_ISL_446829 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Wales/PHWC-33E46/2020 EPI_ISL_446829 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Wales/PHWC-279DB/2020 EPI_ISL_432052 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Wales/PHWC-279DB/2020 EPI_ISL_432052 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/CAMB-1AD14D/2020 EPI_ISL_447970 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/CAMB-1AD14D/2020 EPI_ISL_447970 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/SHEF-CBB1F/2020 EPI_ISL_442396 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/SHEF-CBB1F/2020 EPI_ISL_442396 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/SHEF-C14C3/2020 EPI_ISL_448829 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/SHEF-C14C3/2020 EPI_ISL_448829 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/OXON-AE417/2020 EPI_ISL_448690 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/OXON-AE417/2020 EPI_ISL_448690 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/CVR143/2020 EPI_ISL_425687 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/CVR143/2020 EPI_ISL_425687 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-7D578/2020 EPI_ISL_442242 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-7D578/2020 EPI_ISL_442242 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/20134069004/2020 EPI_ISL_423161 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/20134069004/2020 EPI_ISL_423161 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/CVR199/2020 EPI_ISL_425729 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/CVR199/2020 EPI_ISL_425729 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-2F28D/2020 EPI_ISL_446226 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -71644,8 +76815,6 @@ England/CAMB-768B2/2020 EPI_ISL_438347 title "Preliminary analysis of SARS-CoV-2 England/CAMB-768B2/2020 EPI_ISL_438347 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/NORW-E6FF4/2020 EPI_ISL_448997 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/NORW-E6FF4/2020 EPI_ISL_448997 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/SHEF-CBB88/2020 EPI_ISL_448878 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/SHEF-CBB88/2020 EPI_ISL_448878 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-2F38A/2020 EPI_ISL_446240 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-2F38A/2020 EPI_ISL_446240 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-741AA/2020 EPI_ISL_440364 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -72744,8 +77913,6 @@ England/CAMB-1AC06F/2020 EPI_ISL_444365 title "Preliminary analysis of SARS-CoV- England/CAMB-1AC06F/2020 EPI_ISL_444365 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/LOND-D5514/2020 EPI_ISL_444229 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/LOND-D5514/2020 EPI_ISL_444229 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Wales/PHWC-2631A/2020 EPI_ISL_422028 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Wales/PHWC-2631A/2020 EPI_ISL_422028 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-82464/2020 EPI_ISL_443626 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-82464/2020 EPI_ISL_443626 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB4488/2020 EPI_ISL_449311 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -72790,8 +77957,6 @@ England/CAMB-7A56C/2020 EPI_ISL_441251 title "Preliminary analysis of SARS-CoV-2 England/CAMB-7A56C/2020 EPI_ISL_441251 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/NORW-EAF4B/2020 EPI_ISL_457395 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/NORW-EAF4B/2020 EPI_ISL_457395 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/LOND-D37B6/2020 EPI_ISL_440986 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/LOND-D37B6/2020 EPI_ISL_440986 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/LIVE-9DED1/2020 EPI_ISL_453246 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/LIVE-9DED1/2020 EPI_ISL_453246 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-7B6D1/2020 EPI_ISL_442210 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -72988,8 +78153,6 @@ NorthernIreland/NIRE-FB493/2020 EPI_ISL_441429 title "Preliminary analysis of SA NorthernIreland/NIRE-FB493/2020 EPI_ISL_441429 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 NorthernIreland/NIRE-FB4C0/2020 EPI_ISL_441432 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" NorthernIreland/NIRE-FB4C0/2020 EPI_ISL_441432 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -NorthernIreland/NIRE-FB4FD/2020 EPI_ISL_441435 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -NorthernIreland/NIRE-FB4FD/2020 EPI_ISL_441435 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 NorthernIreland/NIRE-FB509/2020 EPI_ISL_441436 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" NorthernIreland/NIRE-FB509/2020 EPI_ISL_441436 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 NorthernIreland/NIRE-FB615/2020 EPI_ISL_448958 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -73020,8 +78183,6 @@ England/BRIS-123437/2020 EPI_ISL_442645 title "Preliminary analysis of SARS-CoV- England/BRIS-123437/2020 EPI_ISL_442645 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-7A0E3/2020 EPI_ISL_441290 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-7A0E3/2020 EPI_ISL_441290 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Wales/PHWC-25928/2020 EPI_ISL_422285 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Wales/PHWC-25928/2020 EPI_ISL_422285 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/CVR205/2020 EPI_ISL_425735 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/CVR205/2020 EPI_ISL_425735 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB285/2020 EPI_ISL_456901 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -73098,8 +78259,6 @@ England/LOND-D5F25/2020 EPI_ISL_444263 title "Preliminary analysis of SARS-CoV-2 England/LOND-D5F25/2020 EPI_ISL_444263 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-7CC83/2020 EPI_ISL_441558 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-7CC83/2020 EPI_ISL_441558 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Wales/PHWC-2A871/2020 EPI_ISL_445628 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Wales/PHWC-2A871/2020 EPI_ISL_445628 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/LIVE-9C564/2020 EPI_ISL_449552 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/LIVE-9C564/2020 EPI_ISL_449552 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-7669A/2020 EPI_ISL_438518 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -73208,12 +78367,8 @@ Wales/PHWC-2B2CD/2020 EPI_ISL_432043 title "Preliminary analysis of SARS-CoV-2 i Wales/PHWC-2B2CD/2020 EPI_ISL_432043 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-25A52/2020 EPI_ISL_422172 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-25A52/2020 EPI_ISL_422172 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Wales/PHWC-26532/2020 EPI_ISL_422343 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Wales/PHWC-26532/2020 EPI_ISL_422343 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/SHEF-CD47C/2020 EPI_ISL_432546 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/SHEF-CD47C/2020 EPI_ISL_432546 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/SHEF-C72F0/2020 EPI_ISL_432840 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/SHEF-C72F0/2020 EPI_ISL_432840 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/CVR1476/2020 EPI_ISL_438822 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/CVR1476/2020 EPI_ISL_438822 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/CVR3227/2020 EPI_ISL_449238 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -73366,8 +78521,6 @@ Wales/PHWC-33CD3/2020 EPI_ISL_446811 title "Preliminary analysis of SARS-CoV-2 i Wales/PHWC-33CD3/2020 EPI_ISL_446811 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/CVR3492/2020 EPI_ISL_456880 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/CVR3492/2020 EPI_ISL_456880 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/LIVE-9A00B/2020 EPI_ISL_449330 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/LIVE-9A00B/2020 EPI_ISL_449330 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-31BBA/2020 EPI_ISL_446539 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-31BBA/2020 EPI_ISL_446539 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-2C6FD/2020 EPI_ISL_445899 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -73416,8 +78569,6 @@ England/CAMB-78F9D/2020 EPI_ISL_441175 title "Preliminary analysis of SARS-CoV-2 England/CAMB-78F9D/2020 EPI_ISL_441175 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-2A62C/2020 EPI_ISL_445596 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-2A62C/2020 EPI_ISL_445596 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/NORW-EB5EE/2020 EPI_ISL_457447 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/NORW-EB5EE/2020 EPI_ISL_457447 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/LOND-D5A33/2020 EPI_ISL_457292 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/LOND-D5A33/2020 EPI_ISL_457292 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/EXET-1369D8/2020 EPI_ISL_457242 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -73448,8 +78599,6 @@ England/CAMB-82552/2020 EPI_ISL_443426 title "Preliminary analysis of SARS-CoV-2 England/CAMB-82552/2020 EPI_ISL_443426 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-846E4/2020 EPI_ISL_440534 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-846E4/2020 EPI_ISL_440534 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Wales/PHWC-23F73/2020 EPI_ISL_418132 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Wales/PHWC-23F73/2020 EPI_ISL_418132 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/SHEF-CA4BB/2020 EPI_ISL_453737 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/SHEF-CA4BB/2020 EPI_ISL_453737 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/OXON-AC67D/2020 EPI_ISL_448472 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -73692,8 +78841,6 @@ Scotland/CVR2770/2020 EPI_ISL_438978 title "Preliminary analysis of SARS-CoV-2 i Scotland/CVR2770/2020 EPI_ISL_438978 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/20138007404/2020 EPI_ISL_423270 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/20138007404/2020 EPI_ISL_423270 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/NORW-E84B7/2020 EPI_ISL_449155 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/NORW-E84B7/2020 EPI_ISL_449155 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/BRIS-125D49/2020 EPI_ISL_443855 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/BRIS-125D49/2020 EPI_ISL_443855 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/20134081904/2020 EPI_ISL_423181 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -73766,8 +78913,6 @@ Wales/PHWC-242C4/2020 EPI_ISL_418163 title "Preliminary analysis of SARS-CoV-2 i Wales/PHWC-242C4/2020 EPI_ISL_418163 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-7962E/2020 EPI_ISL_441213 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-7962E/2020 EPI_ISL_441213 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/20139032004/2020 EPI_ISL_421917 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/20139032004/2020 EPI_ISL_421917 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/CVR159/2020 EPI_ISL_425698 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/CVR159/2020 EPI_ISL_425698 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-832B4/2020 EPI_ISL_443618 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -73926,8 +79071,6 @@ Scotland/CVR90/2020 EPI_ISL_425814 title "Preliminary analysis of SARS-CoV-2 imp Scotland/CVR90/2020 EPI_ISL_425814 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/20124101202/2020 EPI_ISL_418740 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/20124101202/2020 EPI_ISL_418740 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Wales/PHWC-28F23/2020 EPI_ISL_445459 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Wales/PHWC-28F23/2020 EPI_ISL_445459 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB5090/2020 EPI_ISL_456965 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/EDB5090/2020 EPI_ISL_456965 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB3454/2020 EPI_ISL_439266 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -74088,8 +79231,6 @@ England/NOTT-1107CB/2020 EPI_ISL_441859 title "Preliminary analysis of SARS-CoV- England/NOTT-1107CB/2020 EPI_ISL_441859 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-849DC/2020 EPI_ISL_440496 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-849DC/2020 EPI_ISL_440496 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/20144012404/2020 EPI_ISL_423507 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/20144012404/2020 EPI_ISL_423507 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-78D2A/2020 EPI_ISL_440562 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-78D2A/2020 EPI_ISL_440562 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 NorthernIreland/NIRE-FB23F/2020 EPI_ISL_448952 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -74102,8 +79243,6 @@ Wales/PHWC-31024/2020 EPI_ISL_446395 title "Preliminary analysis of SARS-CoV-2 i Wales/PHWC-31024/2020 EPI_ISL_446395 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB362/2020 EPI_ISL_425981 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/EDB362/2020 EPI_ISL_425981 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/20132080504/2020 EPI_ISL_423806 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/20132080504/2020 EPI_ISL_423806 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/NORT-289C27/2020 EPI_ISL_453513 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/NORT-289C27/2020 EPI_ISL_453513 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-3191A/2020 EPI_ISL_446504 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -74168,12 +79307,8 @@ Scotland/EDB156/2020 EPI_ISL_425921 title "Preliminary analysis of SARS-CoV-2 im Scotland/EDB156/2020 EPI_ISL_425921 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 NorthernIreland/NIRE-1020A3/2020 EPI_ISL_441376 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" NorthernIreland/NIRE-1020A3/2020 EPI_ISL_441376 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -NorthernIreland/NIRE-1020B2/2020 EPI_ISL_441377 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -NorthernIreland/NIRE-1020B2/2020 EPI_ISL_441377 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 NorthernIreland/NIRE-1020D0/2020 EPI_ISL_441379 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" NorthernIreland/NIRE-1020D0/2020 EPI_ISL_441379 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -NorthernIreland/NIRE-1020FE/2020 EPI_ISL_441381 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -NorthernIreland/NIRE-1020FE/2020 EPI_ISL_441381 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 NorthernIreland/NIRE-102128/2020 EPI_ISL_441384 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" NorthernIreland/NIRE-102128/2020 EPI_ISL_441384 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 NorthernIreland/NIRE-FA91D/2020 EPI_ISL_441771 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -74226,8 +79361,6 @@ Scotland/CVR229/2020 EPI_ISL_433275 title "Preliminary analysis of SARS-CoV-2 im Scotland/CVR229/2020 EPI_ISL_433275 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-2F50C/2020 EPI_ISL_446261 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-2F50C/2020 EPI_ISL_446261 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/CAMB-776A8/2020 EPI_ISL_439531 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/CAMB-776A8/2020 EPI_ISL_439531 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-1B3038/2020 EPI_ISL_456748 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-1B3038/2020 EPI_ISL_456748 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/SHEF-CC3BC/2020 EPI_ISL_432523 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -74262,8 +79395,6 @@ Scotland/EDB226/2020 EPI_ISL_425949 title "Preliminary analysis of SARS-CoV-2 im Scotland/EDB226/2020 EPI_ISL_425949 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/BRIS-1224FC/2020 EPI_ISL_440792 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/BRIS-1224FC/2020 EPI_ISL_440792 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Wales/PHWC-30CE5/2020 EPI_ISL_446350 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Wales/PHWC-30CE5/2020 EPI_ISL_446350 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB2359/2020 EPI_ISL_439189 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/EDB2359/2020 EPI_ISL_439189 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/EXET-1368EA/2020 EPI_ISL_457239 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -74288,6 +79419,42 @@ England/CAMB-84F9E/2020 EPI_ISL_440464 title "Preliminary analysis of SARS-CoV-2 England/CAMB-84F9E/2020 EPI_ISL_440464 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/20134067604/2020 EPI_ISL_423155 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/20134067604/2020 EPI_ISL_423155 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Scotland/EDB4718/2020 EPI_ISL_453134 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Scotland/EDB4718/2020 EPI_ISL_453134 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Scotland/EDB3652/2020 EPI_ISL_439304 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Scotland/EDB3652/2020 EPI_ISL_439304 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Scotland/EDB4323/2020 EPI_ISL_453120 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Scotland/EDB4323/2020 EPI_ISL_453120 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/BRIS-122456/2020 EPI_ISL_440630 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/BRIS-122456/2020 EPI_ISL_440630 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/CAMB-765AC/2020 EPI_ISL_439471 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/CAMB-765AC/2020 EPI_ISL_439471 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Scotland/CVR956/2020 EPI_ISL_439138 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Scotland/CVR956/2020 EPI_ISL_439138 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/SHEF-CBB88/2020 EPI_ISL_448878 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/SHEF-CBB88/2020 EPI_ISL_448878 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/LOND-D37B6/2020 EPI_ISL_440986 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/LOND-D37B6/2020 EPI_ISL_440986 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +NorthernIreland/NIRE-FB4FD/2020 EPI_ISL_441435 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +NorthernIreland/NIRE-FB4FD/2020 EPI_ISL_441435 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Wales/PHWC-25928/2020 EPI_ISL_422285 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Wales/PHWC-25928/2020 EPI_ISL_422285 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Wales/PHWC-26532/2020 EPI_ISL_422343 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Wales/PHWC-26532/2020 EPI_ISL_422343 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/SHEF-C72F0/2020 EPI_ISL_432840 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/SHEF-C72F0/2020 EPI_ISL_432840 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/LIVE-9A00B/2020 EPI_ISL_449330 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/LIVE-9A00B/2020 EPI_ISL_449330 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/20139032004/2020 EPI_ISL_421917 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/20139032004/2020 EPI_ISL_421917 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/20132080504/2020 EPI_ISL_423806 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/20132080504/2020 EPI_ISL_423806 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +NorthernIreland/NIRE-1020B2/2020 EPI_ISL_441377 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +NorthernIreland/NIRE-1020B2/2020 EPI_ISL_441377 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +NorthernIreland/NIRE-1020FE/2020 EPI_ISL_441381 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +NorthernIreland/NIRE-1020FE/2020 EPI_ISL_441381 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Wales/PHWC-30CE5/2020 EPI_ISL_446350 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Wales/PHWC-30CE5/2020 EPI_ISL_446350 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB3633/2020 EPI_ISL_439302 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/EDB3633/2020 EPI_ISL_439302 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-287C1/2020 EPI_ISL_432142 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -74418,8 +79585,6 @@ England/SHEF-CFE21/2020 EPI_ISL_432602 title "Preliminary analysis of SARS-CoV-2 England/SHEF-CFE21/2020 EPI_ISL_432602 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/NORT-28BF1D/2020 EPI_ISL_457316 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/NORT-28BF1D/2020 EPI_ISL_457316 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Scotland/CVR2221/2020 EPI_ISL_448164 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Scotland/CVR2221/2020 EPI_ISL_448164 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/20130035804/2020 EPI_ISL_423613 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/20130035804/2020 EPI_ISL_423613 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/CVR195/2020 EPI_ISL_425727 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -74438,8 +79603,6 @@ England/BRIS-121BF8/2020 EPI_ISL_440165 title "Preliminary analysis of SARS-CoV- England/BRIS-121BF8/2020 EPI_ISL_440165 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/CVR1334/2020 EPI_ISL_433544 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/CVR1334/2020 EPI_ISL_433544 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Scotland/CVR2261/2020 EPI_ISL_453036 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Scotland/CVR2261/2020 EPI_ISL_453036 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-330D7/2020 EPI_ISL_446736 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-330D7/2020 EPI_ISL_446736 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/BRIS-12186A/2020 EPI_ISL_440250 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -74860,8 +80023,6 @@ Wales/PHWC-2433A/2020 EPI_ISL_419398 title "Preliminary analysis of SARS-CoV-2 i Wales/PHWC-2433A/2020 EPI_ISL_419398 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB071/2020 EPI_ISL_425869 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/EDB071/2020 EPI_ISL_425869 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/BRIS-123507/2020 EPI_ISL_442626 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/BRIS-123507/2020 EPI_ISL_442626 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-77426/2020 EPI_ISL_439375 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-77426/2020 EPI_ISL_439375 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-34364/2020 EPI_ISL_446908 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -75530,8 +80691,6 @@ Wales/PHWC-2A343/2020 EPI_ISL_445556 title "Preliminary analysis of SARS-CoV-2 i Wales/PHWC-2A343/2020 EPI_ISL_445556 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-30F64/2020 EPI_ISL_446384 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-30F64/2020 EPI_ISL_446384 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Scotland/EDB2631/2020 EPI_ISL_439246 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Scotland/EDB2631/2020 EPI_ISL_439246 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-2649F/2020 EPI_ISL_422032 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-2649F/2020 EPI_ISL_422032 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-26FAD/2020 EPI_ISL_422152 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -75642,8 +80801,6 @@ Wales/PHWC-25EFC/2020 EPI_ISL_422287 title "Preliminary analysis of SARS-CoV-2 i Wales/PHWC-25EFC/2020 EPI_ISL_422287 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 NorthernIreland/NIRE-FB211/2020 EPI_ISL_448950 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" NorthernIreland/NIRE-FB211/2020 EPI_ISL_448950 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Wales/PHWC-32445/2020 EPI_ISL_446648 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Wales/PHWC-32445/2020 EPI_ISL_446648 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-254AF/2020 EPI_ISL_420998 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-254AF/2020 EPI_ISL_420998 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-79819/2020 EPI_ISL_441797 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -75690,8 +80847,6 @@ Wales/PHWC-24F18/2020 EPI_ISL_420927 title "Preliminary analysis of SARS-CoV-2 i Wales/PHWC-24F18/2020 EPI_ISL_420927 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB090/2020 EPI_ISL_425881 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/EDB090/2020 EPI_ISL_425881 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Wales/PHWC-27416/2020 EPI_ISL_431927 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Wales/PHWC-27416/2020 EPI_ISL_431927 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-31543/2020 EPI_ISL_446459 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-31543/2020 EPI_ISL_446459 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-33E28/2020 EPI_ISL_446827 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -75704,8 +80859,6 @@ Wales/PHW35/2020 EPI_ISL_416024 title "Preliminary analysis of SARS-CoV-2 import Wales/PHW35/2020 EPI_ISL_416024 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/SHEF-CB353/2020 EPI_ISL_432506 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/SHEF-CB353/2020 EPI_ISL_432506 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Scotland/EDB2136/2020 EPI_ISL_439166 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Scotland/EDB2136/2020 EPI_ISL_439166 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-317B6/2020 EPI_ISL_446487 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-317B6/2020 EPI_ISL_446487 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-347FF/2020 EPI_ISL_446978 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -75724,8 +80877,6 @@ England/20132020106/2020 EPI_ISL_420635 title "Preliminary analysis of SARS-CoV- England/20132020106/2020 EPI_ISL_420635 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-1AD71E/2020 EPI_ISL_448000 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-1AD71E/2020 EPI_ISL_448000 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/CAMB-1AA580/2020 EPI_ISL_443405 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/CAMB-1AA580/2020 EPI_ISL_443405 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/SHEF-CDEE7/2020 EPI_ISL_442440 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/SHEF-CDEE7/2020 EPI_ISL_442440 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/SHEF-C15B1/2020 EPI_ISL_432725 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -75878,8 +81029,6 @@ Wales/PHWC-269BE/2020 EPI_ISL_422297 title "Preliminary analysis of SARS-CoV-2 i Wales/PHWC-269BE/2020 EPI_ISL_422297 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-347E0/2020 EPI_ISL_446977 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-347E0/2020 EPI_ISL_446977 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/20130033304/2020 EPI_ISL_423600 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/20130033304/2020 EPI_ISL_423600 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB2540/2020 EPI_ISL_439226 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/EDB2540/2020 EPI_ISL_439226 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-25603/2020 EPI_ISL_432141 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -75960,8 +81109,6 @@ England/CAMB-1AEBB7/2020 EPI_ISL_448056 title "Preliminary analysis of SARS-CoV- England/CAMB-1AEBB7/2020 EPI_ISL_448056 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/NORW-E8280/2020 EPI_ISL_449132 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/NORW-E8280/2020 EPI_ISL_449132 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/CAMB-1B0B3A/2020 EPI_ISL_452942 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/CAMB-1B0B3A/2020 EPI_ISL_452942 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-33866/2020 EPI_ISL_446758 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-33866/2020 EPI_ISL_446758 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/BRIS-122B06/2020 EPI_ISL_440683 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -76008,8 +81155,6 @@ England/LIVE-99251/2020 EPI_ISL_439702 title "Preliminary analysis of SARS-CoV-2 England/LIVE-99251/2020 EPI_ISL_439702 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-1B300B/2020 EPI_ISL_456745 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-1B300B/2020 EPI_ISL_456745 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/SHEF-D2438/2020 EPI_ISL_453771 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/SHEF-D2438/2020 EPI_ISL_453771 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/SHEF-BFD81/2020 EPI_ISL_418288 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/SHEF-BFD81/2020 EPI_ISL_418288 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-2BF5D/2020 EPI_ISL_445873 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" @@ -76032,56 +81177,96 @@ England/CAMB-7F36D/2020 EPI_ISL_442919 title "Preliminary analysis of SARS-CoV-2 England/CAMB-7F36D/2020 EPI_ISL_442919 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/CAMB-1AD64E/2020 EPI_ISL_447992 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/CAMB-1AD64E/2020 EPI_ISL_447992 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Wales/PHWC-284E8/2020 EPI_ISL_432059 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Wales/PHWC-284E8/2020 EPI_ISL_432059 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/LIVE-9B34D/2020 EPI_ISL_449435 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/LIVE-9B34D/2020 EPI_ISL_449435 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/CVR1926/2020 EPI_ISL_438856 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/CVR1926/2020 EPI_ISL_438856 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/LIVE-9B51A/2020 EPI_ISL_449456 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/LIVE-9B51A/2020 EPI_ISL_449456 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Scotland/EDB5098/2020 EPI_ISL_456970 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Scotland/EDB5098/2020 EPI_ISL_456970 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/BRIS-121976/2020 EPI_ISL_440233 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/BRIS-121976/2020 EPI_ISL_440233 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Wales/PHWC-27601/2020 EPI_ISL_432049 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Wales/PHWC-27601/2020 EPI_ISL_432049 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/LOND-D5B7C/2020 EPI_ISL_444237 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/LOND-D5B7C/2020 EPI_ISL_444237 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/20129127704/2020 EPI_ISL_424102 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/20129127704/2020 EPI_ISL_424102 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/20139069404/2020 EPI_ISL_423360 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/20139069404/2020 EPI_ISL_423360 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/BRIS-1235DA/2020 EPI_ISL_442655 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/BRIS-1235DA/2020 EPI_ISL_442655 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 NorthernIreland/NIRE-FAACF/2020 EPI_ISL_441714 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" NorthernIreland/NIRE-FAACF/2020 EPI_ISL_441714 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB028/2020 EPI_ISL_425834 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/EDB028/2020 EPI_ISL_425834 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/NORT-28AA1D/2020 EPI_ISL_457309 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/NORT-28AA1D/2020 EPI_ISL_457309 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -NorthernIreland/NIRE-FB78B/2020 EPI_ISL_448977 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -NorthernIreland/NIRE-FB78B/2020 EPI_ISL_448977 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/SHEF-CB46F/2020 EPI_ISL_442384 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/SHEF-CB46F/2020 EPI_ISL_442384 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB287/2020 EPI_ISL_425964 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/EDB287/2020 EPI_ISL_425964 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/LIVE-9C9B3/2020 EPI_ISL_440927 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/LIVE-9C9B3/2020 EPI_ISL_440927 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/CAMB-80D01/2020 EPI_ISL_443013 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/CAMB-80D01/2020 EPI_ISL_443013 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Scotland/CVR513/2020 EPI_ISL_433309 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Scotland/CVR513/2020 EPI_ISL_433309 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +USA/IL-UW-347/2020 EPI_ISL_450701 title "Distinct patterns of SARS-CoV-2 transmission in two nearby communities in Wisconsin, USA" +USA/IL-UW-347/2020 EPI_ISL_450701 paper_url https://www.medrxiv.org/content/10.1101/2020.07.09.20149104v1 +Wales/PHWC-2631A/2020 EPI_ISL_422028 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Wales/PHWC-2631A/2020 EPI_ISL_422028 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Wales/PHWC-2A871/2020 EPI_ISL_445628 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Wales/PHWC-2A871/2020 EPI_ISL_445628 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/NORW-EB5EE/2020 EPI_ISL_457447 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/NORW-EB5EE/2020 EPI_ISL_457447 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Wales/PHWC-23F73/2020 EPI_ISL_418132 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Wales/PHWC-23F73/2020 EPI_ISL_418132 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/NORW-E84B7/2020 EPI_ISL_449155 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/NORW-E84B7/2020 EPI_ISL_449155 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Wales/PHWC-28F23/2020 EPI_ISL_445459 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Wales/PHWC-28F23/2020 EPI_ISL_445459 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/20144012404/2020 EPI_ISL_423507 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/20144012404/2020 EPI_ISL_423507 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/CAMB-776A8/2020 EPI_ISL_439531 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/CAMB-776A8/2020 EPI_ISL_439531 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Scotland/CVR2221/2020 EPI_ISL_448164 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Scotland/CVR2221/2020 EPI_ISL_448164 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Scotland/CVR2261/2020 EPI_ISL_453036 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Scotland/CVR2261/2020 EPI_ISL_453036 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/BRIS-123507/2020 EPI_ISL_442626 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/BRIS-123507/2020 EPI_ISL_442626 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Scotland/EDB2631/2020 EPI_ISL_439246 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Scotland/EDB2631/2020 EPI_ISL_439246 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Wales/PHWC-32445/2020 EPI_ISL_446648 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Wales/PHWC-32445/2020 EPI_ISL_446648 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Wales/PHWC-27416/2020 EPI_ISL_431927 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Wales/PHWC-27416/2020 EPI_ISL_431927 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Scotland/EDB2136/2020 EPI_ISL_439166 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Scotland/EDB2136/2020 EPI_ISL_439166 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/CAMB-1AA580/2020 EPI_ISL_443405 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/CAMB-1AA580/2020 EPI_ISL_443405 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/20130033304/2020 EPI_ISL_423600 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/20130033304/2020 EPI_ISL_423600 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/CAMB-1B0B3A/2020 EPI_ISL_452942 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/CAMB-1B0B3A/2020 EPI_ISL_452942 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/SHEF-D2438/2020 EPI_ISL_453771 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/SHEF-D2438/2020 EPI_ISL_453771 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Wales/PHWC-284E8/2020 EPI_ISL_432059 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Wales/PHWC-284E8/2020 EPI_ISL_432059 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/LIVE-9B34D/2020 EPI_ISL_449435 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/LIVE-9B34D/2020 EPI_ISL_449435 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Scotland/EDB5098/2020 EPI_ISL_456970 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Scotland/EDB5098/2020 EPI_ISL_456970 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +Wales/PHWC-27601/2020 EPI_ISL_432049 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +Wales/PHWC-27601/2020 EPI_ISL_432049 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/LOND-D5B7C/2020 EPI_ISL_444237 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/LOND-D5B7C/2020 EPI_ISL_444237 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/20129127704/2020 EPI_ISL_424102 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/20129127704/2020 EPI_ISL_424102 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +England/BRIS-1235DA/2020 EPI_ISL_442655 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +England/BRIS-1235DA/2020 EPI_ISL_442655 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 +NorthernIreland/NIRE-FB78B/2020 EPI_ISL_448977 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" +NorthernIreland/NIRE-FB78B/2020 EPI_ISL_448977 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-32CA7/2020 EPI_ISL_446674 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-32CA7/2020 EPI_ISL_446674 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-32296/2020 EPI_ISL_446626 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-32296/2020 EPI_ISL_446626 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/LIVE-9C9B3/2020 EPI_ISL_440927 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/LIVE-9C9B3/2020 EPI_ISL_440927 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-2CAA6/2020 EPI_ISL_445944 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-2CAA6/2020 EPI_ISL_445944 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-2FA1C/2020 EPI_ISL_446266 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Wales/PHWC-2FA1C/2020 EPI_ISL_446266 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Scotland/EDB4209/2020 EPI_ISL_456935 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" Scotland/EDB4209/2020 EPI_ISL_456935 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -England/CAMB-80D01/2020 EPI_ISL_443013 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -England/CAMB-80D01/2020 EPI_ISL_443013 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 -Scotland/CVR513/2020 EPI_ISL_433309 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" -Scotland/CVR513/2020 EPI_ISL_433309 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 England/LIVE-9EBE8/2020 EPI_ISL_453375 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" England/LIVE-9EBE8/2020 EPI_ISL_453375 paper_url https://virological.org/t/preliminary-analysis-of-sars-cov-2-importation-establishment-of-uk-transmission-lineages/507 Wales/PHWC-266A8/2020 EPI_ISL_422128 title "Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages" diff --git a/source-data/location_hierarchy.tsv b/source-data/location_hierarchy.tsv index 362c08a1..08e0961a 100644 --- a/source-data/location_hierarchy.tsv +++ b/source-data/location_hierarchy.tsv @@ -12,14 +12,18 @@ Africa Democratic Republic of the Congo Sud Kivu Africa Egypt Cairo Africa Egypt Cairo Al Matariyyah Africa Egypt Egypt +Africa Egypt Faiyum Africa Egypt Kalyoubia Africa Egypt Nile River Cruise -Africa France France Africa Gambia Kombo Africa Gambia West Coast Region Africa Ghana Greater Accra Africa Ghana Greater Accra Accra Africa Kenya Kenya +Africa Madagascar Analamanga +Africa Madagascar Analamanga Antananarivo +Africa Madagascar Analanjirofo +Africa Madagascar Analanjirofo Fenoarivo Africa Mali Bamako Africa Mali Mopti Africa Morocco Casablanca @@ -39,11 +43,13 @@ Africa Senegal Dakar Africa Senegal Dakar Guediawaye Africa Senegal Dakar Keur Massar Africa Senegal Dakar Mbao +Africa Senegal Dakar Pikine Africa Senegal Dakar Sangalkam Africa Senegal Dakar Yeumbeul Africa Senegal Kolda Africa Senegal Kolda Velingara Africa Senegal Mbour +Africa Senegal Pikine Africa Senegal St-Louis Africa Senegal Thies Africa Senegal Touba @@ -52,11 +58,20 @@ Africa South Africa Free State Africa South Africa Gauteng Africa South Africa KwaZulu-Natal Africa South Africa KwaZulu-Natal Amajuba +Africa South Africa KwaZulu-Natal Berea +Africa South Africa KwaZulu-Natal Harry Gwala +Africa South Africa KwaZulu-Natal King Cetshwayo +Africa South Africa KwaZulu-Natal KwaDukuza +Africa South Africa KwaZulu-Natal Morningside +Africa South Africa KwaZulu-Natal Overport Africa South Africa KwaZulu-Natal Ugu +Africa South Africa KwaZulu-Natal Umbilo Africa South Africa KwaZulu-Natal Zululand Africa South Africa KwaZulu-Natal eThekwini Africa South Africa KwaZulu-Natal iLembe Africa South Africa KwaZulu-Natal uMgungundlovu +Africa South Africa KwaZulu-Natal uMkhanyakude +Africa South Africa KwaZulu-Natal uMzinyathi Africa South Africa KwaZulu-Natal uThukela Africa South Africa Limpopo Africa South Africa Mpumalanga @@ -69,6 +84,8 @@ Africa Tunisia Ben Arous Africa Tunisia Bizerte Africa Tunisia Tunisia Africa Uganda Uganda +Africa Zambia Zambia +Africa Zambia Lusaka Asia Asia Asia Asia Bahrain Bahrain Asia Bahrain Capital Governorate @@ -81,7 +98,6 @@ Asia Bangladesh Barishal Asia Bangladesh Chattogram Asia Bangladesh Chattogram Brahmanbaria Asia Bangladesh Chattogram Chandpur -Asia Bangladesh Chittagong Asia Bangladesh Dhaka Asia Bangladesh Dhaka Agargaon Asia Bangladesh Dhaka Gulshan @@ -96,12 +112,14 @@ Asia Bangladesh Jhenaidha Shailokupa Asia Bangladesh Khulna Asia Bangladesh Khulna Jashore Asia Bangladesh Mirpur +Asia Bangladesh Mymensingh Asia Bangladesh Narail Asia Bangladesh Narail Kalia Asia Bangladesh Narayanganj Asia Bangladesh Rajshahi Asia Bangladesh Rajshahi Pabna Asia Bangladesh Rangpur +Asia Bangladesh Rangpur Nilphamari Asia Bangladesh Sylhet Asia Bangladesh Sylhet Habiganj Asia Bangladesh Sylhet Moulvibazar @@ -157,6 +175,8 @@ Asia China Jiangxi Shangrao Asia China Jiangxi Xinyu Asia China Jiangxi Yichun Asia China Jiangxi Yingtan +Asia China Liaoning +Asia China Liaoning Dalian Asia China Shandong Asia China Shandong Qingdao Asia China Shanghai @@ -181,6 +201,7 @@ Asia India Andhra Pradesh Asia India Assam Asia India Bihar Asia India Delhi +Asia India Delhi Tughlakabad Asia India Gujarat Asia India Gujarat Ahmedabad Asia India Gujarat Bardoli @@ -221,11 +242,24 @@ Asia India Gujarat Surat Asia India Gujarat Talod Asia India Gujarat Una Asia India Gujarat Vadodara +Asia India Gujarat Bhavnagar +Asia India Gujarat Daskroi +Asia India Gujarat Dholka +Asia India Gujarat Ghogha +Asia India Gujarat Kamrej +Asia India Gujarat Mahuva Asia India Haryana +Asia India Haryana Faridabad +Asia India Haryana Gurugram +Asia India Haryana Palwal Asia India India Asia India Jammu Asia India Kargil Asia India Karnataka +Asia India Karnataka Bengaluru Urban +Asia India Karnataka Chikkaballapura +Asia India Karnataka Haveri +Asia India Karnataka Kolar Asia India Kerala Asia India Ladakh Asia India Madhya Pradesh @@ -234,8 +268,17 @@ Asia India Madhya Pradesh Mandsaur Asia India Madhya Pradesh Neemach Asia India Madhya Pradesh Ujjain Asia India Maharashtra +Asia India Maharashtra Akola +Asia India Maharashtra Amravati +Asia India Maharashtra Aurangabad +Asia India Maharashtra Jalna +Asia India Maharashtra Mumbai +Asia India Maharashtra Wardha +Asia India Maharashtra Washim +Asia India Maharashtra Yavatmal Asia India Mumbai Asia India Odisha +Asia India Odisha Ganjam Asia India Punjab Asia India Rajasthan Asia India Rajasthan Bikaner @@ -244,16 +287,31 @@ Asia India Tamil Nadu Asia India Telangana Asia India Telangana Hyderabad Asia India Uttar Pradesh +Asia India Uttar Pradesh Aligarh +Asia India Uttar Pradesh Gaziabad Asia India Uttar Pradesh Lucknow +Asia India Uttar Pradesh Muzaffarnagar Asia India Uttar Pradesh Noida +Asia India Uttarakhand +Asia India Uttarakhand Chamoli +Asia India Uttarakhand Dehradun +Asia India Uttarakhand Haridwar +Asia India Uttarakhand Pauri Garhwal +Asia India Uttarakhand Rudraprayag +Asia India Uttarakhand Tehri Garhwal +Asia India Uttarakhand Uttarkashi Asia India West Bengal +Asia India West Bengal Birbhum Asia India West Bengal Darjeeling Asia India West Bengal East Medinipur +Asia India West Bengal Hooghly Asia India West Bengal Howrah Asia India West Bengal Kolkata +Asia India West Bengal Nadia Asia India West Bengal North 24 Parganas Asia India West Bengal South 24 Parganas Asia India West Bengal Tehatta +Asia Indonesia Bandung Asia Indonesia East Kalimantan Asia Indonesia East Kalimantan Samarinda Asia Indonesia Indonesia @@ -336,6 +394,7 @@ Asia Kuwait Kuwait Dasman Asia Kuwait Kuwait Hawali Asia Kyrgyzstan Kyrgyzstan Asia Lebanon Beirut +Asia Lebanon Lebanon Asia Malaysia Kuala Lumpur Asia Malaysia Malaysia Asia Malaysia Pahang @@ -397,6 +456,7 @@ Asia South Korea Uijeongbu Asia Sri Lanka Sri Lanka Asia Taiwan Keelung Asia Taiwan New Taipei City +Asia Taiwan Tainan Asia Taiwan Taiwan Asia Taiwan Taiwan Kaohsiung Asia Taiwan Taiwan Taipei @@ -412,7 +472,6 @@ Asia Thailand Samut Songkhram Asia Thailand Thailand Asia Thailand Trang Asia Timor-Leste Timor-Leste -Asia Turkey Turkey Asia United Arab Emirates United Arab Emirates Asia Vietnam Ho Chi Minh City Asia Vietnam Lao Cai @@ -848,6 +907,7 @@ Europe Czech Republic Zlin Europe Czech Republic Zlin Fryšták Europe Denmark Copenhagen Europe Denmark Denmark +Europe Denmark Faroe Islands Europe Estonia Estonia Europe Europe Europe Europe Finland Finland @@ -855,15 +915,23 @@ Europe Finland Finland Rovaniemi Europe Finland Helsinki Europe Finland Uusimaa Europe France Auvergne-Rhône-Alpes +Europe France Auvergne-Rhône-Alpes Bourgoin-Jallieu Europe France Auvergne-Rhône-Alpes Bourg-en-Bresse +Europe France Auvergne-Rhône-Alpes Chambery Europe France Auvergne-Rhône-Alpes Contamines +Europe France Auvergne-Rhône-Alpes Contamine-sur-Arve +Europe France Auvergne-Rhône-Alpes Craponne +Europe France Auvergne-Rhône-Alpes Decines Europe France Auvergne-Rhône-Alpes Lyon Europe France Auvergne-Rhône-Alpes Macon +Europe France Auvergne-Rhône-Alpes Oyonnax Europe France Auvergne-Rhône-Alpes Privas Europe France Auvergne-Rhône-Alpes Saint-Priest +Europe France Auvergne-Rhône-Alpes Tarare Europe France Auvergne-Rhône-Alpes Valence Europe France Auvergne-Rhône-Alpes Venissieux Europe France Auvergne-Rhône-Alpes Vienne +Europe France Auvergne-Rhône-Alpes Villefranche-sur-Saône Europe France Bourgogne Europe France Bourgogne Dijon Europe France Bourgogne-France-Comté @@ -918,9 +986,15 @@ Europe France Ile de France Vanves Europe France Normandie Europe France Normandie Carentan Europe France Normandie Rouen +Europe France Nouvelle-Aquitaine +Europe France Nouvelle-Aquitaine Limoges Europe France Occitanie +Europe France Occitanie Caraman Europe France Pays de la Loire Europe France Pays de la Loire Nantes +Europe France Provence-Alpes-Côte d'Azur +Europe France Provence-Alpes-Côte d'Azur Embrun +Europe France Provence-Alpes-Côte d'Azur Marseille Europe France Toulouse Europe Germany Baden-Wuerttemberg Europe Germany Baden-Wuerttemberg Tuebingen @@ -939,6 +1013,8 @@ Europe Germany North Rhine Westphalia Münster Europe Germany Rostock Europe Germany Western Pomerania Europe Greece Athens +Europe Greece Central Greece +Europe Greece Central Greece Livadeia Europe Greece Greece Europe Greece Thessaloniki Europe Hungary Balassagyarmat @@ -962,10 +1038,19 @@ Europe Iceland Reykjavik Europe Iran Iran Europe Ireland Cork Europe Ireland Dublin +Europe Ireland Galway Europe Ireland Ireland +Europe Ireland Kerry +Europe Ireland Kildare +Europe Ireland Kilkenny +Europe Ireland Leitrim Europe Ireland Limerick Europe Ireland Louth +Europe Ireland Meath +Europe Ireland Monaghan +Europe Ireland Sligo Europe Ireland Tipperary +Europe Ireland Waterford Europe Ireland Wicklow Europe Italy Abruzzo Europe Italy Abruzzo L'Aquila @@ -976,6 +1061,7 @@ Europe Italy Apulia Lecce Europe Italy Apulia Taranto Europe Italy Basilicata Europe Italy Campania +Europe Italy Campania Benevento Europe Italy Campania Naples Europe Italy Castel di Sangro Europe Italy Emilia-Romagna @@ -1062,6 +1148,10 @@ Europe Poland Wielkopolskie Europe Poland Wielkopolskie Kalisz Europe Poland Zielonogorskie Europe Poland Łódzkie +Europe Poland Łódzkie Belchatow County +Europe Poland Łódzkie Lodz +Europe Poland Łódzkie Pajeczno County +Europe Poland Łódzkie Skierniewice County Europe Portugal Beja Europe Portugal Beja Santa Clara de Louredo Europe Portugal Coimbra @@ -1121,7 +1211,11 @@ Europe Russia Leningrad Region Kipen Europe Russia Lipetsk Region Europe Russia Moscow Europe Russia Moscow Region -Europe Russia Novosibirsk Region +Europe Russia Novosibirsk Oblast +Europe Russia Bryansk Oblast +Europe Russia Republic of Bashkortostan +Europe Russia Yamalo-Nenets Autonomous Okrug +Europe Russia Yaroslavl Oblast Europe Russia Omsk Region Europe Russia Orenburg Region Europe Russia Perm Region @@ -1152,35 +1246,52 @@ Europe Spain Andalusia Europe Spain Andalusia Alamedilla Europe Spain Andalusia Albolote Europe Spain Andalusia Alcala la Real +Europe Spain Andalusia Alfacar Europe Spain Andalusia Algeciras Europe Spain Andalusia Alhaurin de la Torre Europe Spain Andalusia Almeria Europe Spain Andalusia Antequera Europe Spain Andalusia Atarfe Europe Spain Andalusia Benajarafe +Europe Spain Andalusia Benalmadena +Europe Spain Andalusia Benalua de las Villas Europe Spain Andalusia Cadiz +Europe Spain Andalusia Castillo de Locubin Europe Spain Andalusia Castril Europe Spain Andalusia Chiclana de la Frontera Europe Spain Andalusia Churriana de la Vega +Europe Spain Andalusia Cijuela +Europe Spain Andalusia Cogollos de la Vega Europe Spain Andalusia Conil de la Frontera Europe Spain Andalusia Cordoba Europe Spain Andalusia Cortijos Nuevos +Europe Spain Andalusia Cullar Vega +Europe Spain Andalusia Durcal Europe Spain Andalusia Fonelas Europe Spain Andalusia Frailes Europe Spain Andalusia Granada Europe Spain Andalusia Guadix Europe Spain Andalusia Guevejar +Europe Spain Andalusia Huescar Europe Spain Andalusia Huetor Santillan +Europe Spain Andalusia Illora Europe Spain Andalusia Iznalloz Europe Spain Andalusia Jerez De La Frontera Europe Spain Andalusia Jun Europe Spain Andalusia La Linea de la Concepcion +Europe Spain Andalusia La Peza +Europe Spain Andalusia La Zubia +Europe Spain Andalusia Las Gabias +Europe Spain Andalusia Loja Europe Spain Andalusia Mairena Aljarafe Europe Spain Andalusia Malaga Europe Spain Andalusia Maracena +Europe Spain Andalusia Navas de San Juan +Europe Spain Andalusia Nerja Europe Spain Andalusia Ogijares Europe Spain Andalusia Otura Europe Spain Andalusia Pinos Puente +Europe Spain Andalusia Puebla de Don Fadrique Europe Spain Andalusia Puerto Santa Maria Europe Spain Andalusia Pulianas Europe Spain Andalusia Rincon de la Victoria @@ -1191,6 +1302,7 @@ Europe Spain Andalusia San Roque Europe Spain Andalusia Santa Fe Europe Spain Andalusia Sevilla Europe Spain Andalusia Tarifa +Europe Spain Andalusia Torre del Mar Europe Spain Andalusia Torremolinos Europe Spain Andalusia Ubeda Europe Spain Andalusia Valderrubio @@ -1204,6 +1316,7 @@ Europe Spain Aragon Zaragoza Europe Spain Asturias Europe Spain Balear Islands Europe Spain Balear Islands Alcudia +Europe Spain Balear Islands Calvia Europe Spain Balear Islands Ibiza Europe Spain Balear Islands Llubi Europe Spain Balear Islands Lluchmayor @@ -1227,11 +1340,13 @@ Europe Spain Castilla la Mancha Albacete Europe Spain Castilla la Mancha Almansa Europe Spain Castilla la Mancha Ayna Europe Spain Castilla la Mancha Balazote +Europe Spain Castilla la Mancha Bogarra Europe Spain Castilla la Mancha Cuenca Europe Spain Castilla la Mancha Hellin Europe Spain Castilla la Mancha Lezuza Europe Spain Castilla la Mancha Madrigueras Europe Spain Castilla la Mancha Mingogil +Europe Spain Castilla la Mancha Motilleja Europe Spain Castilla la Mancha Riopar Europe Spain Castilla la Mancha San Clemente Europe Spain Castilla la Mancha Socuellamos @@ -1241,7 +1356,21 @@ Europe Spain Castilla la Mancha Villanueva de la Jara Europe Spain Castilla la Mancha Villarrobledo Europe Spain Castilla y Leon Europe Spain Catalunya +Europe Spain Catalunya Badalona Europe Spain Catalunya Barcelona +Europe Spain Catalunya El Prat de Llobregat +Europe Spain Catalunya Granollers +Europe Spain Catalunya Jorba +Europe Spain Catalunya L'Hospitalet de Llobregat +Europe Spain Catalunya Mataro +Europe Spain Catalunya Mollet del Valles +Europe Spain Catalunya Sabadell +Europe Spain Catalunya San Cugat del Valles +Europe Spain Catalunya Santa Coloma de Cervello +Europe Spain Catalunya Tiana +Europe Spain Catalunya Vallirana +Europe Spain Catalunya Vic +Europe Spain Catalunya Vilasar de Mar Europe Spain Comunitat Valenciana Europe Spain Comunitat Valenciana Albal Europe Spain Comunitat Valenciana Alboraya @@ -1275,9 +1404,19 @@ Europe Spain Comunitat Valenciana Valencia Europe Spain Comunitat Valenciana Valencia Horta Europe Spain Comunitat Valenciana Xeraco Europe Spain Donostia-San Sebatian +Europe Spain Extremadura +Europe Spain Extremadura Arroyo de la Luz +Europe Spain Extremadura Caceres +Europe Spain Extremadura Jaraicejo +Europe Spain Extremadura Malpartida de Plasencia +Europe Spain Extremadura Navalmoral de la Mata +Europe Spain Extremadura Plasencia +Europe Spain Extremadura Pueblonuevo de Miramontes +Europe Spain Extremadura Villanueva de la Vera Europe Spain Galicia Europe Spain Galicia A Coruna Europe Spain Galicia Ames +Europe Spain Galicia Bertamirans Europe Spain Galicia Boiro Europe Spain Galicia Boqueixón Europe Spain Galicia El Rosal @@ -1287,28 +1426,51 @@ Europe Spain Galicia Muros Europe Spain Galicia Negreira Europe Spain Galicia Noia Europe Spain Galicia Oroso +Europe Spain Galicia Outes Europe Spain Galicia Padrón +Europe Spain Galicia Pontecesures +Europe Spain Galicia Puerto del Son Europe Spain Galicia Rianjo Europe Spain Galicia Ribeira Europe Spain Galicia Santa Comba Europe Spain Galicia Santiago de Compostela Europe Spain Galicia Teo Europe Spain Galicia Valga +Europe Spain Galicia Vedra Europe Spain Grand Canary Islands Europe Spain La Rioja +Europe Spain La Rioja Agoncillo +Europe Spain La Rioja Albelda de Iregua +Europe Spain La Rioja Alberite +Europe Spain La Rioja Alfaro +Europe Spain La Rioja Autol Europe Spain La Rioja Calahorra +Europe Spain La Rioja Casalarreina +Europe Spain La Rioja El Villar de Arnedo +Europe Spain La Rioja Ezcaray +Europe Spain La Rioja Haro +Europe Spain La Rioja Herce +Europe Spain La Rioja Lardero Europe Spain La Rioja Logrono +Europe Spain La Rioja Najera +Europe Spain La Rioja Nalda +Europe Spain La Rioja Ojacastro Europe Spain La Rioja Pradejon +Europe Spain La Rioja San Vicente de la Sonsierra +Europe Spain La Rioja Santo Domingo de la Calzada +Europe Spain La Rioja Villamediana de Iregua Europe Spain Madrid Europe Spain Madrid Alcala de Henares Europe Spain Madrid Alcobendas Europe Spain Madrid Ambite Europe Spain Madrid Arganda del Rey Europe Spain Madrid Campo Real +Europe Spain Madrid Fuenlabrada Europe Spain Madrid Leganés Europe Spain Madrid Madrid Europe Spain Madrid Parla Europe Spain Madrid Rivas-Vaciamadrid +Europe Spain Madrid San Fernando de Henares Europe Spain Madrid Valdaracete Europe Spain Melilla Europe Spain Murcia @@ -1381,6 +1543,7 @@ Europe Turkey Agri Europe Turkey Aksaray Europe Turkey Ankara Europe Turkey Balikesir +Europe Turkey Bursa Europe Turkey Canakkale Europe Turkey Denizli Europe Turkey Eskisehir @@ -1397,6 +1560,7 @@ Europe Turkey Siirt Europe Turkey Tekirdag Europe Turkey Tokat Europe Turkey Turkey +Europe Turkey Kars Province Europe United Kingdom England Europe United Kingdom England Derbyshire Europe United Kingdom England London @@ -1412,6 +1576,9 @@ Europe United Kingdom Scotland Europe United Kingdom United Kingdom Europe United Kingdom Wales Europe United Kingdom Wales Cardiff +North America Belize Belize +North America Belize Belmopan +North America Canada Alberta North America Canada British Columbia North America Canada Manitoba North America Canada New Brunswick @@ -1436,10 +1603,14 @@ North America Costa Rica San Jose Desamparados North America Costa Rica San Jose Escazu North America Costa Rica San Jose Perez Zeledon North America Costa Rica San Jose San Jose -North America Costa Rica San Jose Santa Ana +North America Costa Rica San Jose Santa Ana CR North America Costa Rica San Jose Tarrazu North America Costa Rica San Jose Tibas +North America Guatemala Guatemala North America Jamaica Jamaica +North America Mexico Baja California +North America Mexico Baja California Tijuana +North America Mexico Baja California Sur North America Mexico Chiapas North America Mexico Chihuahua North America Mexico Durango @@ -1447,16 +1618,77 @@ North America Mexico Durango Gomez Palacios North America Mexico Estado de Mexico North America Mexico Gomez Palacios North America Mexico Guadalajara +North America Mexico Guanajuato North America Mexico Guerrero North America Mexico Heredia North America Mexico Jalisco North America Mexico Mexico North America Mexico Mexico City +North America Mexico Morelos +North America Mexico Nayarit North America Mexico Puebla North America Mexico Queretaro North America Mexico Quintana Roo +North America Mexico Sinaloa +North America Mexico Sonora +North America Mexico Estado de Mexico +North America Mexico Tabasco +North America Mexico Yucatan +North America Panama Bocas del Toro +North America Panama Chiriqui +North America Panama Cocle +North America Panama Colon +North America Panama Guna Yala +North America Panama Guna Yala Aligandí +North America Panama Herrera +North America Panama Los Santos +North America Panama Panama Center +North America Panama Panama Center Alcalde Díaz +North America Panama Panama Center Amelia Denis de Icaza +North America Panama Panama Center Ancón +North America Panama Panama Center Arnulfo Arias +North America Panama Panama Center Belisario Frías +North America Panama Panama Center Belisario Porras +North America Panama Panama Center Bella Vista +North America Panama Panama Center Betania +North America Panama Panama Center Calidonia +North America Panama Panama Center Chepo +North America Panama Panama Center Chilibre +North America Panama Panama Center Clayton PA +North America Panama Panama Center Don Bosco +North America Panama Panama Center El Chorrillo +North America Panama Panama Center El Crisol +North America Panama Panama Center Ernesto Córdoba +North America Panama Panama Center Jose Domingo Espinar +North America Panama Panama Center Juan Díaz +North America Panama Panama Center Las Cumbres +North America Panama Panama Center Las Mañanitas +North America Panama Panama Center Omar Torrijos +North America Panama Panama Center Pacora +North America Panama Panama Center Parque Lefevre +North America Panama Panama Center Parque Real +North America Panama Panama Center Pedregal +North America Panama Panama Center Pueblo Nuevo +North America Panama Panama Center Rufina Alfaro +North America Panama Panama Center Río Abajo +North America Panama Panama Center San Francisco PA +North America Panama Panama Center Santa Ana PA +North America Panama Panama Center Tocumen +North America Panama Panama Center Victoriano Lorenzo North America Panama Panama City +North America Panama Panama Oeste +North America Panama Panama Oeste Arraiján +North America Panama Panama Oeste Burunga +North America Panama Panama Oeste Guadalupe +North America Panama Panama Oeste Herrera (Panama Oeste) +North America Panama Panama Oeste Juan Demóstenes Arosemena +North America Panama Panama Oeste La Chorrera +North America Panama Panama Oeste Lídice +North America Panama Panama Oeste Veracruz +North America Panama Panama Oeste Vista Alegre +North America Panama Santiago de Veraguas North America USA Alabama +North America USA Alabama Mobile County North America USA Alaska North America USA Alaska Anchorage North America USA Alaska Fairbanks @@ -1467,11 +1699,14 @@ North America USA Arizona North America USA Arizona Maricopa County North America USA Arizona Phoenix North America USA Arkansas +North America USA Arkansas Little Rock North America USA California North America USA California Alameda County North America USA California Contra Costa County +North America USA California Cruise_Ship_1 +North America USA California Cruise_Ship_2 North America USA California Davis -North America USA California Grand Princess cruise ship +North America USA California Grand Princess Cruise Ship North America USA California Humboldt County North America USA California Imperial County North America USA California Los Angeles County @@ -1490,6 +1725,7 @@ North America USA California Santa Clara County North America USA California Solano County North America USA California Ventura County North America USA Colorado +North America USA Colorado Colorado Springs North America USA Colorado Denver County North America USA Colorado El Paso County CO North America USA Connecticut @@ -1534,6 +1770,7 @@ North America USA Florida North America USA Florida Miami North America USA Florida Miami-Dade County North America USA Florida Palm Beach County +North America USA Florida Walton County North America USA Georgia North America USA Grand Princess North America USA Grand Princess Grand Princess Cruise Ship @@ -1549,6 +1786,7 @@ North America USA Illinois Dupage County North America USA Illinois Kane County North America USA Illinois Lake County North America USA Illinois Mchenry County +North America USA Illinois Ogle County North America USA Illinois Winnebago County IL North America USA Indiana North America USA Indiana Indianapolis @@ -1613,8 +1851,10 @@ North America USA Minnesota Houston County North America USA Minnesota Stearns County North America USA Minnesota Wabasha County North America USA Minnesota Winona County +North America USA Mississippi North America USA Missouri North America USA Missouri St. Louis MO +North America USA Missouri Saint Louis County North America USA Montana North America USA Nebraska North America USA Nevada @@ -1624,6 +1864,7 @@ North America USA New Jersey Bergen County North America USA New Jersey Camden County North America USA New Jersey Essex County North America USA New Jersey Hudson County +North America USA New Jersey Burlington County North America USA New Mexico North America USA New York North America USA New York Albany County @@ -1659,11 +1900,15 @@ North America USA North Carolina North America USA Ohio North America USA Ohio Cincinnati North America USA Ohio Columbus OH +North America USA Ohio Cuyahoga County North America USA Oklahoma North America USA Oregon +North America USA Oregon Clackamas County North America USA Oregon Columbia County OR +North America USA Oregon Lane County OR North America USA Oregon Marion County North America USA Oregon Multnomah County +North America USA Oregon Umatilla County North America USA Oregon Wasco County North America USA Oregon Washington County OR North America USA Pennsylvania @@ -1674,8 +1919,13 @@ North America USA Rhode Island North America USA San Jose North America USA South Carolina North America USA South Carolina Berkeley County +North America USA South Carolina Columbia SC North America USA South Carolina Fairfield County SC +North America USA South Carolina Kershaw North America USA South Carolina Richland County SC +North America USA South Carolina Ridgeway +North America USA South Dakota +North America USA South Dakota Minnehaha County North America USA Tennessee North America USA Texas North America USA Texas Greater Houston Area @@ -1690,23 +1940,27 @@ North America USA Washington North America USA Washington Adams County WA North America USA Washington Asotin County North America USA Washington Benton County +North America USA Washington Chelan County North America USA Washington Clark County North America USA Washington Cowlitz County North America USA Washington Douglas County North America USA Washington Franklin County WA North America USA Washington Grant County WA +North America USA Washington Grays Harbor County North America USA Washington Jefferson County WA North America USA Washington King County North America USA Washington Kirkland North America USA Washington Kittitas County +North America USA Washington Klickitat County North America USA Washington Mason County North America USA Washington Pierce County +North America USA Washington San Juan County North America USA Washington Seattle North America USA Washington Skagit County North America USA Washington Snohomish County North America USA Washington Spokane County North America USA Washington Thurston County -North America USA Washington Umatilla County +North America USA Washington Walla Walla County North America USA Washington Whatcom County North America USA Washington Yakima County North America USA Washington DC @@ -1723,8 +1977,6 @@ North America USA Wisconsin Brown Deer North America USA Wisconsin Campbellsport North America USA Wisconsin Chippewa County WI North America USA Wisconsin Chippewa Falls -North America USA Wisconsin Colorado Springs -North America USA Wisconsin Columbia County North America USA Wisconsin Columbia County WI North America USA Wisconsin Columbus WI North America USA Wisconsin Cottage Grove @@ -1757,6 +2009,7 @@ North America USA Wisconsin La Crosse County North America USA Wisconsin Lafayette County North America USA Wisconsin Madison North America USA Wisconsin Manitowoc County +North America USA Wisconsin Marquette County North America USA Wisconsin Marshall North America USA Wisconsin Mequon North America USA Wisconsin Middleton @@ -1800,6 +2053,7 @@ North America USA Wisconsin Whitefish Bay North America USA Wisconsin Winnebago County WI North America USA Wyoming Oceania Australia Australia +Oceania Australia Australian Capital Territory Oceania Australia New South Wales Oceania Australia New South Wales Sydney Oceania Australia New South Wales Tweed Heads @@ -1814,7 +2068,7 @@ Oceania Australia Queensland Southeast Queensland Oceania Australia Queensland Sunshine Coast Oceania Australia South Australia Oceania Australia Victoria -Oceania Australia Victoria Clayton +Oceania Australia Victoria Clayton AU Oceania Australia Victoria Melbourne Oceania Australia Western Australia Oceania Australia Western Australia Perth @@ -1836,6 +2090,7 @@ Oceania New Zealand Wairarapa Oceania New Zealand Waitemata Oceania New Zealand Wellington South America Argentina Argentina +South America Argentina Cordoba AR South America Argentina Buenos Aires South America Argentina Buenos Aires Bahia Blanca South America Argentina Buenos Aires Lomas de Zamora @@ -1865,7 +2120,17 @@ South America Brazil Mato Grosso South America Brazil Minas Gerais South America Brazil Para South America Brazil Paraná +South America Brazil Paraná Curitiba South America Brazil Pernambuco +South America Brazil Pernambuco Alianca +South America Brazil Pernambuco Camaragibe +South America Brazil Pernambuco Caruaru +South America Brazil Pernambuco Ipojuca +South America Brazil Pernambuco Jaboatao Dos Guararapes +South America Brazil Pernambuco Olinda +South America Brazil Pernambuco Paulista +South America Brazil Pernambuco Recife +South America Brazil Pernambuco Sao Lourenco Da Mata South America Brazil Piaui South America Brazil Rio Grande do Norte South America Brazil Rio Grande do Sul @@ -1943,10 +2208,11 @@ South America Colombia Cesar South America Colombia Cesar Valledupar South America Colombia Choco South America Colombia Choco Quibdo +South America Colombia Cienaga de Oro South America Colombia Colombia -South America Colombia Cordoba -South America Colombia Cordoba Monteria -South America Colombia Cordoba Tierralta +South America Colombia Cordoba CO +South America Colombia Cordoba CO Monteria +South America Colombia Cordoba CO Tierralta South America Colombia Cundinamarca South America Colombia Cundinamarca Cajica South America Colombia Cundinamarca Choconta @@ -1969,16 +2235,22 @@ South America Colombia Narino Ipiales South America Colombia Narino Tumaco South America Colombia Norte de Santander South America Colombia Norte de Santander Cucuta +South America Colombia Pasto South America Colombia Quindio South America Colombia Quindio Armenia South America Colombia Risaralda South America Colombia Risaralda Dosquebradas South America Colombia Risaralda Pereira South America Colombia Santander +South America Colombia Santander de Quilichao South America Colombia Santander Barrancabermeja South America Colombia Santander Bucaramanga +South America Colombia Soledad +South America Colombia Suesca +South America Colombia Tolemaida South America Colombia Tolima South America Colombia Tolima Ibague +South America Colombia Tunja South America Colombia Valle del Cauca South America Colombia Valle del Cauca Andalucia South America Colombia Valle del Cauca Buga @@ -1990,6 +2262,7 @@ South America Colombia Valle del Cauca Trujillo South America Colombia Valle del Cauca Tulua South America Colombia Valle del Cauca Yumbo South America Ecuador Carchi +South America Ecuador Carchi Awa Reserve South America Ecuador Chimborazo South America Ecuador Chimborazo Riobamba South America Ecuador Galapagos