diff --git a/src/ontology/hp-edit.owl b/src/ontology/hp-edit.owl index 82337aeec..e374e3214 100644 --- a/src/ontology/hp-edit.owl +++ b/src/ontology/hp-edit.owl @@ -18093,6 +18093,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(AnnotationProperty()) @@ -20133,7 +20136,7 @@ AnnotationAssertion( "HP:0000155") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "Oral ulcer") -SubClassOf( ) +SubClassOf( ) # Class: (Abnormality of the tongue) @@ -27488,6 +27491,8 @@ AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) "Poor attention span") AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) "Problem paying attention") AnnotationAssertion(Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) Annotation( ) "Short attention span") +AnnotationAssertion( "Easy distractibility") +AnnotationAssertion( "High distractibility") AnnotationAssertion( "HP:0000736") AnnotationAssertion(rdfs:label "Short attention span") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) @@ -112810,7 +112815,7 @@ AnnotationAssertion(rdfs:label "Abno EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) SubClassOf( ) -# Class: (Abnormality of the seventh cranial nerve) +# Class: (Abnormal seventh cranial physiology) AnnotationAssertion(Annotation( ) "Abnormality of the seventh cranial nerve sometimes also referred to as the facial nerve.") AnnotationAssertion(dcterms:creator ) @@ -112818,9 +112823,9 @@ AnnotationAssertion( AnnotationAssertion( "UMLS:C4021223") AnnotationAssertion( "Abnormality of the facial nerve") AnnotationAssertion( "HP:0010827") -AnnotationAssertion(rdfs:label "Abnormality of the seventh cranial nerve") +AnnotationAssertion(rdfs:label "Abnormal seventh cranial physiology") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -SubClassOf( ) +SubClassOf( ) # Class: (Hemifacial spasm) @@ -116598,7 +116603,7 @@ AnnotationAssertion( "Recurrent aphthous stomatitis can be classified into three forms, with minor ulcers (over 80% of RAS cases) being less than 1 cm in diameter and self-limiting; major ulcers being over 1 cm in diameter with potential scar formation; and herpetiform ulcers manifesting as recurrent episodes with multiple small ulcers throughout the oral mucosa.") AnnotationAssertion(rdfs:label "Recurrent aphthous stomatitis") SubClassOf( ) -SubClassOf( ) +SubClassOf( ) # Class: (Recurrent sinusitis) @@ -165078,7 +165083,7 @@ AnnotationAssertion(dc:date "2018-12 AnnotationAssertion(dcterms:creator ) AnnotationAssertion(Annotation( ) "Canker sore") AnnotationAssertion(rdfs:label "Aphthous ulcer") -SubClassOf( ) +SubClassOf( ) # Class: (Abdominal cramps) @@ -194510,13 +194515,13 @@ AnnotationAssertion( "Abnormal circulating lactate dehydrogenase concentration") SubClassOf( ) -# Class: (Reduced lactate dehydrogenase B level) +# Class: (Reduced circulating lactate dehydrogenase concentration) -AnnotationAssertion( "A decreased or reduced level of the enzyme lactate dehydrogenase in serum.") +AnnotationAssertion( "Concentration of lactate dehydrogenase in the blood circulation below the lower limit of normal.") AnnotationAssertion( "MSH:C563641") AnnotationAssertion( "UMLS:C3279904") -AnnotationAssertion(rdfs:comment "Lactate dehydrogenase catalyzes the interconversion of lactate and pyruvate. The B subunit of that enzyme is encoded by LDHB.") -AnnotationAssertion(rdfs:label "Reduced lactate dehydrogenase B level") +AnnotationAssertion(rdfs:comment "Lactate dehydrogenase catalyzes the interconversion of lactate and pyruvate.") +AnnotationAssertion(rdfs:label "Reduced circulating lactate dehydrogenase concentration") SubClassOf( ) # Class: (Decreased circulating complement C4 concentration) @@ -203638,7 +203643,7 @@ AnnotationAssertion( "Glia are nonneuronal cells of the nervous system that provide physical support, respond to injury, regulate the composition of the extracellular milieu, guide neuronal migration during development, and exchange metabolites with neurons.") AnnotationAssertion(rdfs:label "Abnormal glial cell morphology") EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -SubClassOf( ) +SubClassOf( ) # Class: (Abnormal oligodendroglia morphology) @@ -219233,7 +219238,7 @@ SubClassOf( (Overvalued idea) -AnnotationAssertion(Annotation( "PMID:34972814") "A solitary belief that can be considered justified in the context of a person's life history and personality, but which goes on to determine an individual's actions to a morbid degree. The disturbance in functioning and the subjective suffering caused to the patient or others give this type of idea the qualifier of being overvalued.") +AnnotationAssertion(Annotation( "PMID:34972814") "An unreasonable and an isolated sustained belief that is maintained with less than delusional intensity (i.e. the person is able is to acknowledge the possibility that the belief may or may not be true). The belief is not of one that is ordinarily accepted by other members of the person's culture or sub-culture.") AnnotationAssertion(dcterms:contributor ) AnnotationAssertion(dcterms:contributor ) AnnotationAssertion(dcterms:contributor ) @@ -219241,7 +219246,7 @@ AnnotationAssertion(dcterms:contributor ) AnnotationAssertion(dcterms:contributor ) AnnotationAssertion(dcterms:contributor ) -AnnotationAssertion(rdfs:comment "As opposed to delusions, which are false ideas unique to their possessor, overvalued ideas develop from assumptions and beliefs that are shared by other members of the same culture.") +AnnotationAssertion(rdfs:comment "An overvalued idea is held strongly, with less than delusional intensity, usually preoccupies the individual's mental life, compared to many delusions, is ego-syntonic, the content is usually regarded as abnormal compared to the general population (but not bizarre as some delusions), could progress to a delusion and may be associated with a high degree of affect (e.g. anxiety or anger when there is a threat to the loss of their goal or object of the belief).") AnnotationAssertion(rdfs:label "Overvalued idea") SubClassOf( ) @@ -219782,11 +219787,38 @@ SubClassOf( "PMID:20709429") "The cerebriform connective tissue nevus (CCTN) is one of the most characteristic skin findings. It commonly occurs on the soles of the feet, and frequently causes problems because of pain, pruritus, infection, bleeding,exudation, odor, and walking impairment.") AnnotationAssertion( ) -AnnotationAssertion(dcterms:contributor ) +AnnotationAssertion(dcterms:contributor ) AnnotationAssertion(rdfs:comment "The cerebriform connective tissue nevus is frequently observed in patients with Proteus syndrome and it is an important specific criterion for diagnosis.") AnnotationAssertion(rdfs:label "Cerebriform connective tissue nevus") SubClassOf( ) +# Class: (Linear Hyperpigmentation along Blaschko's lines) + +AnnotationAssertion(Annotation( "PMID:33447068") "Linear streaks and swirls of macular hyperpigmentation along the lines of Blaschko.") +AnnotationAssertion( ) +AnnotationAssertion(dcterms:contributor ) +AnnotationAssertion(rdfs:comment "Blaschko's lines are attributed to the migration lines of epidermal cells during embryogenesis and are characterized by a V-shaped pattern on the posterior midline, S-shape on the abdomen, and spiral on the posterior scalp.") +AnnotationAssertion(rdfs:label "Linear Hyperpigmentation along Blaschko's lines") +SubClassOf( ) + +# Class: (Excessive guilt) + +AnnotationAssertion( "Guilt that is excessive in that it is based on an incorrect judgment (that one is responsible for a negative outcome) or is out of proportion to the committed offense.") +AnnotationAssertion( ) +AnnotationAssertion(dcterms:contributor ) +AnnotationAssertion(rdfs:comment "Here we define guilt as the negative feeling that accompanies the belief that one is responsible for a negative outcome or event.") +AnnotationAssertion(rdfs:label "Excessive guilt") +SubClassOf( ) + +# Class: (Mediastinal shift) + +AnnotationAssertion(Annotation( "PMID:35990927") Annotation( "PMID:37680422") "A deviation of the mediastinum from its normal position in the midline of the thoracic cavity. The mediastinum is a compartment of the thoracic cavity that contains the heart and its blood vessels, the esophagus, trachea, thymus, as well as nerves and lymph nodes.") +AnnotationAssertion( ) +AnnotationAssertion(dcterms:contributor ) +AnnotationAssertion(rdfs:comment "Since the pleural cavity is confined by the rib cage, large pleural effusion may push the structures in the thoracic cavity to the opposite side resulting in a shift of the upper and lower mediastinum. Other etiologies are also observed. See Figures 1 and 2 of PMID:35990927 or Figure 1 of PMID:37680422.") +AnnotationAssertion(rdfs:label "Mediastinal shift") +SubClassOf( ) + SubObjectPropertyOf(ObjectPropertyChain( ) ) ) \ No newline at end of file