diff --git a/cellbase-app/pom.xml b/cellbase-app/pom.xml index 53f1d5a900..69dc0b7156 100644 --- a/cellbase-app/pom.xml +++ b/cellbase-app/pom.xml @@ -6,7 +6,7 @@ org.opencb.cellbase cellbase - 4.5.2 + 4.5.3-SNAPSHOT ../pom.xml diff --git a/cellbase-client/pom.xml b/cellbase-client/pom.xml index f1b036391c..5fb117e779 100644 --- a/cellbase-client/pom.xml +++ b/cellbase-client/pom.xml @@ -6,7 +6,7 @@ org.opencb.cellbase cellbase - 4.5.2 + 4.5.3-SNAPSHOT ../pom.xml diff --git a/cellbase-core/pom.xml b/cellbase-core/pom.xml index 237ddc99b2..e10adf38b1 100644 --- a/cellbase-core/pom.xml +++ b/cellbase-core/pom.xml @@ -6,7 +6,7 @@ org.opencb.cellbase cellbase - 4.5.2 + 4.5.3-SNAPSHOT ../pom.xml diff --git a/cellbase-core/src/main/java/org/opencb/cellbase/core/variant/annotation/VariantAnnotationCalculator.java b/cellbase-core/src/main/java/org/opencb/cellbase/core/variant/annotation/VariantAnnotationCalculator.java index b2210f09a8..db93e20cc0 100644 --- a/cellbase-core/src/main/java/org/opencb/cellbase/core/variant/annotation/VariantAnnotationCalculator.java +++ b/cellbase-core/src/main/java/org/opencb/cellbase/core/variant/annotation/VariantAnnotationCalculator.java @@ -980,6 +980,7 @@ private String getIncludedGeneFields(Set annotatorSet) { + "transcripts.cdnaCodingEnd,transcripts.exons.start,transcripts.exons.cdsStart,transcripts.exons.end," + "transcripts.exons.cdsEnd,transcripts.exons.sequence,transcripts.exons.phase," + "transcripts.exons.exonNumber,mirna.matures,mirna.sequence,mirna.matures.cdnaStart," + + "transcripts.exons.genomicCodingStart,transcripts.exons.genomicCodingEnd," + "mirna.matures.cdnaEnd"; if (annotatorSet.contains("expression")) { diff --git a/cellbase-lib/pom.xml b/cellbase-lib/pom.xml index 80f98fddbc..3fc8a0a7f9 100644 --- a/cellbase-lib/pom.xml +++ b/cellbase-lib/pom.xml @@ -6,7 +6,7 @@ org.opencb.cellbase cellbase - 4.5.2 + 4.5.3-SNAPSHOT ../pom.xml diff --git a/cellbase-server/pom.xml b/cellbase-server/pom.xml index 21cdc76b3e..3a695b7306 100644 --- a/cellbase-server/pom.xml +++ b/cellbase-server/pom.xml @@ -6,7 +6,7 @@ org.opencb.cellbase cellbase - 4.5.2 + 4.5.3-SNAPSHOT ../pom.xml diff --git a/cellbase-test/pom.xml b/cellbase-test/pom.xml index 25441ab79c..5d764dc467 100644 --- a/cellbase-test/pom.xml +++ b/cellbase-test/pom.xml @@ -22,7 +22,7 @@ org.opencb.cellbase cellbase-test - 4.5.2 + 4.5.3-SNAPSHOT pom diff --git a/pom.xml b/pom.xml index 9bc89b6586..228ab64211 100644 --- a/pom.xml +++ b/pom.xml @@ -6,7 +6,7 @@ org.opencb.cellbase cellbase - 4.5.2 + 4.5.3-SNAPSHOT pom CellBase project @@ -22,7 +22,7 @@ - 4.5.2 + 4.5.3-SNAPSHOT 1.8 1.2.2 3.5.1