cluster.json

{
    "__default__" :
    {
        "t" : "35:00:00",
        "N" : 1,
        "partition" : "exacloud",
        "J" : "{rule}.{wildcards}",
        "o" : "logs/{rule}/{wildcards}_{rule}%j.out",
        "e" : "logs/{rule}/{wildcards}_{rule}%j.err",
        "c" : 4,
        "mem" : 45000
    },
     "mapReads_single_cases" :
    {
        "J" : "mapReads_single_cases",
        "o" : "logs/mapReads/mapReads_single_cases%j.out",
        "e" : "logs/mapReads/mapReads_single_cases%j.err",
        "c" : 12,
        "mem" : 64000
    },
     "mapReads_single_controls" :
    {
        "J" : "mapReads_single_controls",
        "o" : "logs/mapReads/mapReads_single_controls%j.out",
        "e" : "logs/mapReads/mapReads_single_controls%j.err",
        "c" : 12,
        "mem" : 64000
    },
     "mapReads_paired_cases" :
    {
        "J" : "mapReads_paired_cases",
        "o" : "logs/mapReads/mapReads_paired_cases%j.out",
        "e" : "logs/mapReads/mapReads_paired_cases%j.err",
        "c" : 12,
        "mem" : 64000
    },
     "mapReads_paired_controls" :
    {
        "J" : "mapReads_paired_controls",
        "o" : "logs/mapReads/mapReads_paired_controls%j.out",
        "e" : "logs/mapReads/mapReads_paired_controls%j.err",
        "c" : 12,
        "mem" : 64000
    },
     "makeTracks" :
    {
        "J" : "makeTracks",
        "o" : "logs/makeTracks/makeTracks%j.out",
        "e" : "logs/makeTracks/makeTracks%j.err",
        "c" : 4,
        "mem" : 45000
    },
     "bb2bed" :
    {
        "J" : "bb2bed",
        "o" : "logs/bb2bed/bb2bed%j.out",
        "e" : "logs/bb2bed/bb2bed%j.err",
        "c" : 4,
        "mem" : 45000
    },
     "call_peaks" :
    {
        "J" : "call_peaks",
        "o" : "logs/call_peaks/call_peaks%j.out",
        "e" : "logs/call_peaks/call_peaks%j.err",
        "c" : 12,
        "mem" : 64000
    }
}