From 06f07effe1f75f224b314d2140aa4b5363309ef3 Mon Sep 17 00:00:00 2001
From: John Bogovic <bogovicj@janelia.hhmi.org>
Date: Fri, 10 Jan 2025 09:44:21 -0500
Subject: [PATCH] doc/style: javadoc fixes

---
 src/main/java/bdv/gui/TransformSelectorDialog.java | 3 +--
 src/main/java/bdv/ij/ApplyBigwarpPlugin.java       | 2 ++
 src/main/java/bigwarp/BigWarpInit.java             | 3 ++-
 3 files changed, 5 insertions(+), 3 deletions(-)

diff --git a/src/main/java/bdv/gui/TransformSelectorDialog.java b/src/main/java/bdv/gui/TransformSelectorDialog.java
index 8df37d5..56de914 100644
--- a/src/main/java/bdv/gui/TransformSelectorDialog.java
+++ b/src/main/java/bdv/gui/TransformSelectorDialog.java
@@ -100,12 +100,11 @@
 import ij.IJ;
 import ij.ImageJ;
 import ij.gui.ProgressBar;
-import loci.poi.util.SystemOutLogger;
 import net.imglib2.util.Pair;
 import se.sawano.java.text.AlphanumericComparator;
 
 /**
- * Essentially a copy of {@link DatasetSelectorDialog} to work for 
+ * Essentially a copy of DatasetSelectorDialog to work for 
  * transformation selection.
  *
  * Aim to deprecate this class in the future once DatasetSelectorDialog can
diff --git a/src/main/java/bdv/ij/ApplyBigwarpPlugin.java b/src/main/java/bdv/ij/ApplyBigwarpPlugin.java
index e84f8bd..2729e2a 100644
--- a/src/main/java/bdv/ij/ApplyBigwarpPlugin.java
+++ b/src/main/java/bdv/ij/ApplyBigwarpPlugin.java
@@ -919,7 +919,9 @@ public static List<Double[]> getMatchedPoints(
 	 * @param ltm the {@link LandmarkTableModel}
 	 * @param transform the transform using to warp images (used for warped moving source option)
 	 * @param fieldOfViewPointFilter the landmark name filter for FOV estimation
+	 * @param bboxEst the bounding box estimation method
 	 * @param outputResolution the resolution of the output image
+	 * @param movingSource the moving source
 	 * @param targetSource the target source
 	 * @return the offset in physical units
 	 */
diff --git a/src/main/java/bigwarp/BigWarpInit.java b/src/main/java/bigwarp/BigWarpInit.java
index a2bee10..95a4cd1 100644
--- a/src/main/java/bigwarp/BigWarpInit.java
+++ b/src/main/java/bigwarp/BigWarpInit.java
@@ -359,6 +359,7 @@ public static < T > LinkedHashMap< Source< T >, SourceInfo > createSources( BigW
 	/**
 	 * Initialize BigWarp.
 	 * 
+	 * @param <T> the type
 	 * @param bwdata
 	 *            a BigWarpData instance
 	 * @param src
@@ -402,6 +403,7 @@ public static < T > BigWarpData< T > add( BigWarpData< T > bwdata, LinkedHashMap
 	/**
 	 * Initialize BigWarp.
 	 *
+	 * @param <T> the type
 	 * @param bwdata
 	 *            a BigWarpData instance
 	 * @param src
@@ -430,7 +432,6 @@ public static < T > BigWarpData< T > add( BigWarpData bwdata, Source< T > src, i
 		return bwdata;
 	}
 
-	@SuppressWarnings("unchecked")
 	public static < T > BigWarpData< T > add( BigWarpData< T > bwdata, LinkedHashMap< Source< T >, SourceInfo > sources, RealTransform transform, Supplier<String> transformUriSupplier )
 	{
 		for( Entry<Source<T>, SourceInfo> entry : sources.entrySet() ) {