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You could add a pre-install hook that extracts the zip and then point INSTALL_EXE or RUN_EXE to it. Any script in "$SNAP/sommelier/hooks/pre-install" will be sourced before installation is attempted. These hooks can also change environment variables.
It might be useful to look into doing this automatically. For example, sommelier could check if INSTALL_EXE is an archive and extract it if that's the case.
The application provides a zipball with the setup executable in it, how to snap this kind of application?
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