diff --git a/mashpit/build.py b/mashpit/build.py index 62def14..d49adb8 100755 --- a/mashpit/build.py +++ b/mashpit/build.py @@ -421,9 +421,9 @@ def prepare(args): return db_folder,tmp_folder, conn def build_taxon(args): - log_memory_usage('start') # prepare the database folder and sqlite database db_folder,tmp_folder,conn = prepare(args) + log_memory_usage('start') # format the pathogen name pathogen_name = args.species.strip().replace(' ','_') # validate the species name