diff --git a/Rscript/Library/mzkit_app/@export/massbank.d.ts b/Rscript/Library/mzkit_app/@export/massbank.d.ts index 5f9ef299f..3cc0d9fa2 100644 --- a/Rscript/Library/mzkit_app/@export/massbank.d.ts +++ b/Rscript/Library/mzkit_app/@export/massbank.d.ts @@ -111,6 +111,13 @@ declare namespace massbank { * + default value Is ``null``. */ function lipidmaps_id(lipidmaps: any, env?: object): any; + /** + * load the herb compound information + * + * + * @param file - + */ + function load_HERB_ingredient(file: string): object; /** * load compounds from herbs database * @@ -118,6 +125,10 @@ declare namespace massbank { */ function load_herbs(repo: string): object; /** + * load herbs species information + * + * + * @param file - */ function load_herbs_list(file: string): object; /** diff --git a/Rscript/Library/mzkit_app/man/mzkit/massbank/massbank.md b/Rscript/Library/mzkit_app/man/mzkit/massbank/massbank.md index dcd5152f8..9c36d1d5b 100644 --- a/Rscript/Library/mzkit_app/man/mzkit/massbank/massbank.md +++ b/Rscript/Library/mzkit_app/man/mzkit/massbank/massbank.md @@ -29,4 +29,5 @@ Metabolite annotation database toolkit + [metabo_anno](massbank/metabo_anno.1) construct a new metabolite annotation information data + [inchikey](massbank/inchikey.1) generates the inchikey hashcode based on the given inchi data + [load_herbs](massbank/load_herbs.1) load compounds from herbs database -+ [load_herbs_list](massbank/load_herbs_list.1) ++ [load_herbs_list](massbank/load_herbs_list.1) load herbs species information ++ [load_HERB_ingredient](massbank/load_HERB_ingredient.1) load the herb compound information diff --git a/Rscript/Library/mzkit_app/man/mzkit/massbank/massbank/load_HERB_ingredient.1 b/Rscript/Library/mzkit_app/man/mzkit/massbank/massbank/load_HERB_ingredient.1 new file mode 100644 index 000000000..083c08fbb --- /dev/null +++ b/Rscript/Library/mzkit_app/man/mzkit/massbank/massbank/load_HERB_ingredient.1 @@ -0,0 +1,20 @@ +.\" man page create by R# package system. +.TH MASSBANK 1 2000-Jan "load_HERB_ingredient" "load_HERB_ingredient" +.SH NAME +load_HERB_ingredient \- load the herb compound information +.SH SYNOPSIS +\fIload_HERB_ingredient(\fBfile\fR as string);\fR +.SH DESCRIPTION +.PP +load the herb compound information +.PP +.SH OPTIONS +.PP +\fBfile\fB \fR\- -. +.PP +.SH SEE ALSO +massbank +.SH FILES +.PP +mzkit.dll +.PP diff --git a/Rscript/Library/mzkit_app/man/mzkit/massbank/massbank/load_herbs_list.1 b/Rscript/Library/mzkit_app/man/mzkit/massbank/massbank/load_herbs_list.1 index 28315967c..17ac9c3f6 100644 --- a/Rscript/Library/mzkit_app/man/mzkit/massbank/massbank/load_herbs_list.1 +++ b/Rscript/Library/mzkit_app/man/mzkit/massbank/massbank/load_herbs_list.1 @@ -1,9 +1,17 @@ .\" man page create by R# package system. .TH MASSBANK 1 2000-Jan "load_herbs_list" "load_herbs_list" .SH NAME -load_herbs_list \- +load_herbs_list \- load herbs species information .SH SYNOPSIS \fIload_herbs_list(\fBfile\fR as string);\fR +.SH DESCRIPTION +.PP +load herbs species information +.PP +.SH OPTIONS +.PP +\fBfile\fB \fR\- -. +.PP .SH SEE ALSO massbank .SH FILES diff --git a/Rscript/Library/mzkit_app/vignettes/mzkit/massbank.html b/Rscript/Library/mzkit_app/vignettes/mzkit/massbank.html index eafbee745..dc1598515 100644 --- a/Rscript/Library/mzkit_app/vignettes/mzkit/massbank.html +++ b/Rscript/Library/mzkit_app/vignettes/mzkit/massbank.html @@ -282,7 +282,13 @@

massbank

load_herbs_list - +

load herbs species information

+ + + + load_HERB_ingredient + +

load the herb compound information

diff --git a/Rscript/Library/mzkit_app/vignettes/mzkit/massbank/load_HERB_ingredient.html b/Rscript/Library/mzkit_app/vignettes/mzkit/massbank/load_HERB_ingredient.html new file mode 100644 index 000000000..93053ea71 --- /dev/null +++ b/Rscript/Library/mzkit_app/vignettes/mzkit/massbank/load_HERB_ingredient.html @@ -0,0 +1,70 @@ + + + + + load the herb compound information + + + + + + +
+ + + + + + +
load_HERB_ingredient {massbank}R Documentation
+ +

load the herb compound information

+ +

Description

+ + + +

Usage

+ +
+
load_HERB_ingredient(file);
+
+ +

Arguments

+ + + +
file
+

[as string]

+ +
+ + +

Details

+ + + +

Authors

+ + BioNovoGene + +

Value

+ + this function returns data object of type HERB_ingredient_info.

clr value class

+ +

Examples

+ + + +
+
[Package massbank version 1.0.0.0 Index] +
+
+ + + + + + + \ No newline at end of file diff --git a/Rscript/Library/mzkit_app/vignettes/mzkit/massbank/load_herbs_list.html b/Rscript/Library/mzkit_app/vignettes/mzkit/massbank/load_herbs_list.html index 026fd4ba7..73316f179 100644 --- a/Rscript/Library/mzkit_app/vignettes/mzkit/massbank/load_herbs_list.html +++ b/Rscript/Library/mzkit_app/vignettes/mzkit/massbank/load_herbs_list.html @@ -2,7 +2,7 @@ - load_herbs_list + load herbs species information @@ -18,11 +18,11 @@ -

load_herbs_list

+

load herbs species information

Description

- load_herbs_list +

Usage

@@ -33,7 +33,10 @@

Usage

Arguments

- + +
file
+

[as string]

+