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TODO.md

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TODO

  • Milestone 1

    • fix environment conflicts
    • tests
      • add tissuemap test (not running yet)
    • docs
      • move docs to markdown
      • tutorial notebooks
    • Yuqi
      • send qpdiff (optimally downsized)
      • show Martin a working version of tissue map
  • Features implementationssomehow

    • Cellseg implementation @Yuqi (Linux version??)
    • GPU-enabled clustering @Tim
    • Fix the filtering step so that if one condition's p-value is below the threshold @Yuqi
    • Fix the plotting function so that it indicates which p-value are not below the selected threshold @Yuqi