DESCRIPTION

Package: DESeq2
Type: Package
Title: Differential gene expression analysis based on the negative
    binomial distribution
Version: 1.11.1
Author: Michael Love (HSPH Boston), Simon Anders, Wolfgang Huber (EMBL
    Heidelberg)
Maintainer: Michael Love <michaelisaiahlove@gmail.com>
Description: Estimate variance-mean dependence in count data from
    high-throughput sequencing assays and test for differential
    expression based on a model using the negative binomial
    distribution.
License: LGPL (>= 3)
VignetteBuilder: knitr
Imports:
    BiocGenerics (>= 0.7.5),
    Biobase,
    BiocParallel,
    genefilter,
    methods,
    locfit,
    geneplotter,
    ggplot2,
    Hmisc
Depends:
    S4Vectors,
    IRanges,
    GenomicRanges,
    SummarizedExperiment (>= 0.2.0),
    Rcpp (>= 0.10.1),
    RcppArmadillo (>= 0.3.4.4)
Suggests:
    testthat,
    knitr,
    BiocStyle,
    vsn,
    pheatmap,
    RColorBrewer,
    airway,
    pasilla (>= 0.2.10),
    DESeq
LinkingTo: Rcpp, RcppArmadillo
biocViews: Sequencing, ChIPSeq, RNASeq, SAGE, DifferentialExpression,
    GeneExpression