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@mathew-thomson mathew-thomson released this 29 May 22:36
· 17 commits to main since this release
v2.2.0
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Learn about vigilant mode.

This is the official release for v2.2.0 of the Public Health and Environmental Surveillance Open Data Model (PHES-ODM). It includes additional provisions for AMR surveillance, as well as improved reporting for a larger diversity of pathogens, and organism reporting. We added additional mutations and variants (including the current variants of concern - FLiRT and SLip) of the SARS-CoV-2 virus, as well for emerging bird flu (H5N1) markers. Also added additional provisions to improving mapping and interoperability between the USCDC-NWSS data format and the ODM. Additional reporting metrics for protocols and standard curves were also added. Some clean up of the languages table was also done to reduce duplication and remove SQL errors. There are new parts to debug certain issues and respond to demands among the user-base. The largest change is the addition of a new look-up table: wideNames. This helps to standardize and record the wide name formatting to ensure we remain consistent in our wide-to-long and long-to-wide transformations. Additional protocol information was added, and duplication in fields in the languages table were removed.

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