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23 Open 205 Closed
23 Open 205 Closed
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Issues list

Installation fails
#374 opened Dec 29, 2024 by njbayonav
update instruction once deploid.utils released
#367 opened Oct 20, 2024 by shajoezhu
remove the utilities folder from DEploid
#366 opened Oct 20, 2024 by shajoezhu
PLAF file
#362 opened Jun 5, 2024 by trn30
3
Seg fault with vcf
#361 opened Oct 16, 2022 by shajoezhu
2
brew install bash-completion@2
#359 opened Oct 10, 2022 by shajoezhu
Improve current plotting utilities to support the latest version ...
#349 opened Jan 30, 2021 by shajoezhu
1
dEploid mcmc not converging
#346 opened Jan 29, 2021 by bredelings
17
make a diagnositc class
#341 opened Jan 4, 2021 by shajoezhu
fix parameters when enable -best, parameters can still be overwritten when asked
#338 opened Jan 1, 2021 by shajoezhu
2
Update documentation
#335 opened Dec 29, 2020 by shajoezhu
3 of 4 tasks
for haplotype painting, trim according plaf == 0
#299 opened Nov 23, 2018 by shajoezhu
1
inference result metrics
#296 opened Nov 22, 2018 by shajoezhu
1 of 3 tasks
1
need to tidy up log file
#286 opened Oct 24, 2018 by shajoezhu
include pairwise IBD computation
#265 opened Sep 10, 2018 by shajoezhu
Error prediction from the heterozygosity
#259 opened Aug 28, 2018 by shajoezhu
WARNINGS (Incomplete list)
#251 opened Feb 27, 2018 by shajoezhu to be done in new release
log file when use big reference panel
#248 opened Jan 16, 2018 by shajoezhu to be done in new release
give options to generate output files, this is an issue in R version, as it generate output to files. let user to choose, add a flag enhancement
#228 opened Jul 20, 2017 by shajoezhu low priority issues
@shajoezhu
make haplotype a separate class
#174 opened Jan 20, 2017 by shajoezhu low priority issues
mv updateReferencePanel from mcmc class to panel class
#173 opened Jan 20, 2017 by shajoezhu to be done in new release
allow missing site in the reference strain low priority
#78 opened May 24, 2016 by shajoezhu low priority issues
exclude sites when not sorted low priority
#56 opened Mar 11, 2016 by shajoezhu low priority issues
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