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@EESI

Drexel's EESI Lab.

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  1. themetagenomics themetagenomics Public

    R 23 4

  2. PyFeast PyFeast Public

    A Python interface to the Feature Selection Toolkit, contains JMI, BetaGamma, CMIM, CondMI, DISR, ICAP, and mRMR

    Python 18 3

  3. microbiome_embeddings microbiome_embeddings Public

    Python 10 2

  4. ISM ISM Public

    Forked from z2e2/ISM

    Jupyter Notebook 9 3

  5. Comp_Metagenomics_resources Comp_Metagenomics_resources Public

    Materials for Computational Metagenomics class developed for NSF TUES project

    Jupyter Notebook 8 1

  6. Fizzy Fizzy Public

    Feature selection for biological data formats (Fizzy)

    Python 7 4

Repositories

Showing 10 of 50 repositories
  • Incremental-Protein-Search Public Forked from ece303/Incremental-Protein-Search
    EESI/Incremental-Protein-Search’s past year of commit activity
    Python 1 2 0 0 Updated Jan 16, 2025
  • Scorpio Public Forked from MsAlEhR/Scorpio

    Scorpio: Advancing Embeddings for Superior Biological Sequence Analysis

    EESI/Scorpio’s past year of commit activity
    Python 0 GPL-3.0 1 0 0 Updated Dec 24, 2024
  • Naive_Bayes Public Forked from AlexCristian/Naive_Bayes

    A Naive Bayes classifier for metagenomic data.

    EESI/Naive_Bayes’s past year of commit activity
    C++ 2 5 0 0 Updated Sep 23, 2024
  • MetaBERTa Public
    EESI/MetaBERTa’s past year of commit activity
    Python 1 0 0 0 Updated Jun 30, 2024
  • FDSL_Evo Public

    Repository for code from Streamlining Computational Fragment-Based Drug Discovery through Evolutionary Optimization Informed by Ligand-Based Virtual Prescreening

    EESI/FDSL_Evo’s past year of commit activity
    Python 0 0 0 0 Updated May 5, 2024
  • bio-course-materials Public Forked from gditzler/bio-course-materials

    Course materials for a bioinformatics course.

    EESI/bio-course-materials’s past year of commit activity
    Jupyter Notebook 5 GPL-3.0 4 0 0 Updated Jan 23, 2024
  • Complet-Plus Public Forked from rtn28/Complet-Plus

    Complet-Plus by Rachel Nguyen and Drexel EESI Lab

    EESI/Complet-Plus’s past year of commit activity
    Shell 3 2 0 0 Updated Mar 30, 2023
  • covid_severity Public Forked from bahrad/covid_severity

    Predicting COVID-19 Disease Severity from Spike Genotype Based on Global Sequencing Data

    EESI/covid_severity’s past year of commit activity
    Python 0 1 0 0 Updated May 26, 2022
  • Covid Public Forked from bahrad/Covid

    SARS-CoV-2 Spike Sequence Variant Analysis Using Interpretable Deep Learning

    EESI/Covid’s past year of commit activity
    Jupyter Notebook 0 2 0 0 Updated May 26, 2022
  • PTAB Public Forked from bahrad/PTAB

    Analysis and Outcome Prediction for USPTO Patent Trial and Appeals Board proceedings and decisions.

    EESI/PTAB’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 1 0 0 Updated Mar 30, 2022
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