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moved utils/utils.nf into workflows to simplify directory structure
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krokicki committed Mar 7, 2021
1 parent 9506ecc commit f1eb97d
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Showing 5 changed files with 4 additions and 4 deletions.
2 changes: 1 addition & 1 deletion workflows/registration.nf
Original file line number Diff line number Diff line change
Expand Up @@ -17,7 +17,7 @@ include {

include {
index_channel;
} from '../utils/utils'
} from './utils'

workflow registration {
take:
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2 changes: 1 addition & 1 deletion workflows/segmentation.nf
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
include {
index_channel;
} from '../utils/utils'
} from './utils'

include {
predict;
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2 changes: 1 addition & 1 deletion workflows/spot_extraction.nf
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ include {

include {
index_channel;
} from '../utils/utils'
} from './utils'

workflow spot_extraction {
take:
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2 changes: 1 addition & 1 deletion workflows/stitching.nf
Original file line number Diff line number Diff line change
Expand Up @@ -28,7 +28,7 @@ include {

include {
index_channel;
} from '../utils/utils'
} from './utils'

/**
* prepares the work and output directories and invoke stitching
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