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MannLabs · Dec 3, 2024 · 6e1371f · 6e1371f
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diff --git a/docs/api.rst b/docs/api.rst
@@ -1,8 +1,8 @@
-API 
+API
 ===
 
 
-Peptides 
+Peptides
 --------
 
 .. toctree::
@@ -29,7 +29,7 @@ Spectral Library
    modules_spectral_library
 
 
-Reader 
+Reader
 ------
 
 .. toctree::
@@ -53,4 +53,3 @@ Constants
    :maxdepth: 2
 
    modules_constants
-
diff --git a/docs/installation.rst b/docs/installation.rst
@@ -9,7 +9,7 @@ Users
 
 Users can install AlphaBase as a Python package in an existing Python environment.
 
-::  
+::
 
     ## Optional: create a python environment
     # conda create -n alphabase python=3.9
@@ -27,15 +27,15 @@ Development version
 -------------------
 For development, clone the latest version from GitHub to an appropriate location on your personal device and install an editable version:
 
-:: 
+::
 
-    ## Optional: Create development environment 
+    ## Optional: Create development environment
     # conda create -n alphabase_dev python=3.9
     # conda activate alphabase_dev
 
     # Clone repository
     git clone https://github.com/MannLabs/alphabase.git
     cd alphabase
 
-    # Install editable development version 
+    # Install editable development version
     pip install -e "./alphabase[development]"
diff --git a/docs/references.rst b/docs/references.rst
@@ -2,4 +2,3 @@ References
 ==========
 
 .. [Zeng2022] Zeng, W.-F. et al. AlphaPeptDeep: a modular deep learning framework to predict peptide properties for proteomics. Nat Commun 13, 7238 (2022).
-
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Expand Up		@@ -2,4 +2,3 @@ References
		==========

		.. [Zeng2022] Zeng, W.-F. et al. AlphaPeptDeep: a modular deep learning framework to predict peptide properties for proteomics. Nat Commun 13, 7238 (2022).