Use numpy>=2.0.0

Change numpy-stl source due to a bug for numpy>=2.0.0. Will be change again whent the package will be updated pybind11 has to be updated to latest tag to take into numpy>=2.0.0 Still working with numpy < 2.0.0
OpenGATE · Oct 4, 2024 · 794e7e8 · 794e7e8
1 parent 26d5c8a
commit 794e7e8
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diff --git a/core/external/pybind11 b/core/external/pybind11
diff --git a/setup.py b/setup.py
@@ -17,14 +17,14 @@
         "click",
         "python-box<7.0.0",
         "anytree",
-        "numpy<2.0.0",
+        "numpy",
         "itk",
         "uproot",
         "scipy",
         "matplotlib",
         "GitPython",
         "colorlog",
-        "numpy-stl",
+        "numpy-stl @ git+https://github.com/tbaudier/numpy-stl@c7c46838c750eeda794fd568d7c57e6eca1af5a2",
         "radioactivedecay",
         "jsonpickle",
         "pandas",
+2 −0		.clang-tidy
+7 −1		.github/workflows/ci.yml
+3 −3		.github/workflows/emscripten.yaml
+1 −1		.github/workflows/format.yml
+6 −3		.github/workflows/pip.yml
+5 −5		.pre-commit-config.yaml
+2 −0		CMakeLists.txt
+1 −1		docs/advanced/cast/eigen.rst
+3 −3		docs/advanced/cast/stl.rst
+3 −3		docs/advanced/smart_ptrs.rst
+7 −0		docs/basics.rst
+164 −0		docs/changelog.rst
+3 −3		docs/compiling.rst
+44 −0		docs/faq.rst
+16 −3		include/pybind11/detail/class.h
+7 −4		include/pybind11/detail/common.h
+77 −0		include/pybind11/detail/cpp_conduit.h
+71 −0		include/pybind11/detail/exception_translation.h
+9 −7		include/pybind11/detail/internals.h
+43 −2		include/pybind11/detail/type_caster_base.h
+2 −1		include/pybind11/eigen/matrix.h
+2 −4		include/pybind11/eigen/tensor.h
+45 −34		include/pybind11/functional.h
+6 −2		include/pybind11/numpy.h
+7 −55		include/pybind11/pybind11.h
+2 −0		include/pybind11/pytypes.h
+16 −7		include/pybind11/stl/filesystem.h
+1 −1		include/pybind11/stl_bind.h
+1 −3		include/pybind11/typing.h
+26 −3		pybind11/__main__.py
+1 −1		pybind11/_version.py
+7 −0		tests/CMakeLists.txt
+3 −3		tests/conftest.py
+1 −1		tests/constructor_stats.h
+103 −0		tests/exo_planet_c_api.cpp
+19 −0		tests/exo_planet_pybind11.cpp
+2 −0		tests/extra_python_package/test_files.py
+13 −0		tests/home_planet_very_lonely_traveler.cpp
+8 −8		tests/local_bindings.h
+4 −0		tests/pyproject.toml
+1 −1		tests/test_async.py
+12 −0		tests/test_buffers.cpp
+7 −0		tests/test_buffers.py
+1 −1		tests/test_callbacks.cpp
+22 −0		tests/test_cpp_conduit.cpp
+162 −0		tests/test_cpp_conduit.py
+47 −0		tests/test_cpp_conduit_traveler_bindings.h
+25 −0		tests/test_cpp_conduit_traveler_types.h
+1 −1		tests/test_custom_type_setup.py
+2 −2		tests/test_eigen_matrix.cpp
+11 −5		tests/test_eigen_tensor.inl
+6 −6		tests/test_modules.cpp
+1 −1		tests/test_numpy_array.py
+2 −0		tests/test_numpy_dtypes.cpp
+2 −2		tests/test_opaque_types.cpp
+63 −0		tests/test_pytypes.cpp
+44 −2		tests/test_pytypes.py
+2 −2		tests/test_sequences_and_iterators.cpp
+9 −6		tests/test_smart_ptr.cpp
+1 −1		tests/test_stl.cpp
+2 −1		tests/test_tagbased_polymorphic.cpp
+46 −0		tests/test_type_caster_std_function_specializations.cpp
+15 −0		tests/test_type_caster_std_function_specializations.py
+1 −1		tests/test_virtual_functions.cpp
+28 −2		tools/pybind11Common.cmake
+1 −1		tools/pybind11Config.cmake.in