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Ppqt and bam2bw rules for paired- and single-end data #23

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merged 6 commits into from
Oct 25, 2023

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asyakhl
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@asyakhl asyakhl commented Oct 24, 2023

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@asyakhl asyakhl requested a review from skchronicles October 24, 2023 17:38
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Thank you for the updates!

@@ -35,6 +27,14 @@ tmpdir = config['options']['tmp_dir']
genome = config['options']['genome'] # Reference genome of a set of samples
assay = config['options']['assay']

# Check for SE or PE FastQ files:
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Thank you for moving the section below the declaration!

@skchronicles skchronicles merged commit 0ea11a6 into main Oct 25, 2023
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@skchronicles skchronicles deleted the ppqt_bam2bw_se_pe branch June 27, 2024 16:55
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2 participants