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feat(agora): migrate Agora e2e tests (AG-1609) (#2965)
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@hallieswan
hallieswan authored Jan 15, 2025
1 parent 7238f86 commit b1484b7
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15 changes: 14 additions & 1 deletion apps/agora/app/.eslintrc.json
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{
"extends": ["../../../.eslintrc.json"],
"extends": ["plugin:playwright/recommended", "../../../.eslintrc.json"],
"ignorePatterns": ["!**/*"],
"overrides": [
{
Expand Down Expand Up @@ -29,6 +29,19 @@
"files": ["*.html"],
"extends": ["plugin:@nx/angular-template"],
"rules": {}
},
{
"files": ["e2e/**/*.{ts,js,tsx,jsx}", "e2e/**/*.spec.{ts,js,tsx,jsx}"],
"plugins": ["@typescript-eslint"],
"parserOptions": {
"project": "./apps/agora/app/tsconfig.*?.json"
},
"rules": {
"@typescript-eslint/no-floating-promises": "error",
"playwright/no-nested-step": "off",
"playwright/no-conditional-in-test": "off",
"playwright/expect-expect": "off"
}
}
]
}
341 changes: 341 additions & 0 deletions apps/agora/app/e2e/gene-comparison-tool-pinning-cache.spec.ts
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import { expect, test } from '@playwright/test';
import {
GCT_CATEGORIES,
GCT_PROTEIN_SUBCATEGORIES,
GCT_RNA_SUBCATEGORIES,
URL_GCT,
URL_GCT_PROTEIN_TMT,
} from './helpers/constants';
import { gene2WithMultipleProteinsTMT, geneWithMultipleProteinsTMT } from './helpers/data';
import { changeGctCategory, changeGctSubcategory, expectGctPageLoaded } from './helpers/gct';
import {
confirmPinnedItemsByGeneName,
confirmPinnedItemsByItemName,
confirmPinnedItemsCount,
confirmPinnedProteins,
expectPinnedGenesCountText,
expectPinnedProteinsCountText,
pinAllItemsViaSearchByGene,
pinGeneViaSearch,
pinMultipleGenesViaSearch,
} from './helpers/gct-pinning';

test.describe('GCT: Caching pinned genes', () => {
test('Pinned genes are maintained when switching between RNA subcategories', async ({ page }) => {
const genes = ['CYB561A3', 'MANBAL', 'PLEC', 'GFAP'];
const nGenes = genes.length;

await page.goto(URL_GCT);
await expectGctPageLoaded(page, GCT_CATEGORIES.RNA, GCT_RNA_SUBCATEGORIES.AD);

await pinMultipleGenesViaSearch(page, genes);

await test.step('confirm # genes pinned on AD subcategory page', async () => {
await expectPinnedGenesCountText(page, nGenes);
await confirmPinnedItemsCount(page, nGenes);
});

await changeGctSubcategory(
page,
GCT_CATEGORIES.RNA,
GCT_RNA_SUBCATEGORIES.AD,
GCT_RNA_SUBCATEGORIES.AD_AOD,
);

await changeGctSubcategory(
page,
GCT_CATEGORIES.RNA,
GCT_RNA_SUBCATEGORIES.AD_AOD,
GCT_RNA_SUBCATEGORIES.AD_SEX_F,
);

await changeGctSubcategory(
page,
GCT_CATEGORIES.RNA,
GCT_RNA_SUBCATEGORIES.AD_SEX_F,
GCT_RNA_SUBCATEGORIES.AD_SEX_M,
);

// back to original subcategory
await changeGctSubcategory(
page,
GCT_CATEGORIES.RNA,
GCT_RNA_SUBCATEGORIES.AD_SEX_M,
GCT_RNA_SUBCATEGORIES.AD,
);

await test.step('confirm same genes pinned on AD subcategory page', async () => {
await expectPinnedGenesCountText(page, nGenes);
await confirmPinnedItemsCount(page, nGenes);
await confirmPinnedItemsByItemName(page, genes);
});
});

test('Pinned genes are maintained when switching categories: RNA -> Protein -> RNA', async ({
page,
}) => {
const genes = ['CYB561A3', 'MANBAL', 'PLEC', 'GFAP'];
const nGenes = genes.length;

await page.goto(URL_GCT);
await expectGctPageLoaded(page, GCT_CATEGORIES.RNA, GCT_RNA_SUBCATEGORIES.AD);

await pinMultipleGenesViaSearch(page, genes);

await test.step('confirm # genes pinned on RNA page', async () => {
await expectPinnedGenesCountText(page, nGenes);
await confirmPinnedItemsCount(page, nGenes);
});

await changeGctCategory(page, GCT_CATEGORIES.RNA, GCT_CATEGORIES.PROTEIN);

await changeGctSubcategory(
page,
GCT_CATEGORIES.PROTEIN,
GCT_PROTEIN_SUBCATEGORIES.SRM,
GCT_PROTEIN_SUBCATEGORIES.TMT,
);

await changeGctSubcategory(
page,
GCT_CATEGORIES.PROTEIN,
GCT_PROTEIN_SUBCATEGORIES.TMT,
GCT_PROTEIN_SUBCATEGORIES.LFQ,
);

// back to original category
await changeGctCategory(page, GCT_CATEGORIES.PROTEIN, GCT_CATEGORIES.RNA);

await test.step('confirm same genes pinned on RNA page', async () => {
await expectPinnedGenesCountText(page, nGenes);
await confirmPinnedItemsCount(page, nGenes);
await confirmPinnedItemsByItemName(page, genes);
});
});

test('Pinned proteins are maintained when switching between Protein subcategories', async ({
page,
}) => {
const gene1 = geneWithMultipleProteinsTMT.name;
const gene2 = gene2WithMultipleProteinsTMT.name;
const genes = [gene1, gene2];
const nGenes = genes.length;

const proteins1 = geneWithMultipleProteinsTMT.uniProtIds;
const proteins2 = gene2WithMultipleProteinsTMT.uniProtIds;
const nProteins = proteins1.length + proteins2.length;

await page.goto(URL_GCT_PROTEIN_TMT);
await expectGctPageLoaded(page, GCT_CATEGORIES.PROTEIN, GCT_PROTEIN_SUBCATEGORIES.TMT);

for (const gene of genes) {
await pinAllItemsViaSearchByGene(page, gene);
}

await test.step('confirm # genes and proteins pinned on Protein page', async () => {
await expectPinnedGenesCountText(page, nGenes);
await expectPinnedProteinsCountText(page, nProteins);
await confirmPinnedItemsCount(page, nProteins);
});

await changeGctSubcategory(
page,
GCT_CATEGORIES.PROTEIN,
GCT_PROTEIN_SUBCATEGORIES.TMT,
GCT_PROTEIN_SUBCATEGORIES.SRM,
);

await changeGctSubcategory(
page,
GCT_CATEGORIES.PROTEIN,
GCT_PROTEIN_SUBCATEGORIES.SRM,
GCT_PROTEIN_SUBCATEGORIES.LFQ,
);

// back to original subcategory
await changeGctSubcategory(
page,
GCT_CATEGORIES.PROTEIN,
GCT_PROTEIN_SUBCATEGORIES.LFQ,
GCT_PROTEIN_SUBCATEGORIES.TMT,
);

await test.step('confirm same genes and proteins pinned on Protein page', async () => {
await expectPinnedGenesCountText(page, nGenes);
await expectPinnedProteinsCountText(page, nProteins);
await confirmPinnedItemsCount(page, nProteins);

await confirmPinnedProteins(page, gene1, proteins1);
await confirmPinnedProteins(page, gene2, proteins2);
});
});

test('Pinned proteins are maintained when switching categories: Protein -> RNA -> Protein', async ({
page,
}) => {
const gene1 = geneWithMultipleProteinsTMT.name;
const gene2 = gene2WithMultipleProteinsTMT.name;
const genes = [gene1, gene2];
const nGenes = genes.length;

const proteins1 = geneWithMultipleProteinsTMT.uniProtIds;
const proteins2 = gene2WithMultipleProteinsTMT.uniProtIds;
const nProteins = proteins1.length + proteins2.length;

await page.goto(URL_GCT_PROTEIN_TMT);
await expectGctPageLoaded(page, GCT_CATEGORIES.PROTEIN, GCT_PROTEIN_SUBCATEGORIES.TMT);

for (const gene of genes) {
await pinAllItemsViaSearchByGene(page, gene);
}

await test.step('confirm # genes and proteins pinned on Protein page', async () => {
await expectPinnedGenesCountText(page, nGenes);
await expectPinnedProteinsCountText(page, nProteins);
await confirmPinnedItemsCount(page, nProteins);
});

await changeGctCategory(page, GCT_CATEGORIES.PROTEIN, GCT_CATEGORIES.RNA);

await changeGctSubcategory(
page,
GCT_CATEGORIES.RNA,
GCT_RNA_SUBCATEGORIES.AD,
GCT_RNA_SUBCATEGORIES.AD_AOD,
);

// back to original category
await changeGctCategory(page, GCT_CATEGORIES.RNA, GCT_CATEGORIES.PROTEIN);

// back to original subcategory
await changeGctSubcategory(
page,
GCT_CATEGORIES.PROTEIN,
GCT_PROTEIN_SUBCATEGORIES.SRM,
GCT_PROTEIN_SUBCATEGORIES.TMT,
);

await test.step('confirm same genes and proteins pinned on Protein page', async () => {
await expectPinnedGenesCountText(page, nGenes);
await expectPinnedProteinsCountText(page, nProteins);

await confirmPinnedItemsCount(page, nProteins);
await confirmPinnedProteins(page, gene1, proteins1);
await confirmPinnedProteins(page, gene2, proteins2);
});
});

test('Last pinned genes are maintained even if proteins were pinned initially', async ({
page,
}) => {
const rnaCategoryGene = geneWithMultipleProteinsTMT.name;
const rnaCategoryProteins = geneWithMultipleProteinsTMT.uniProtIds;
const proteinCategoryGene = gene2WithMultipleProteinsTMT.name;

await test.step('pin proteins in Protein category', async () => {
await page.goto(URL_GCT_PROTEIN_TMT);
await expectGctPageLoaded(page, GCT_CATEGORIES.PROTEIN, GCT_PROTEIN_SUBCATEGORIES.TMT);

await pinAllItemsViaSearchByGene(page, proteinCategoryGene);
});

await test.step('pin genes in RNA category', async () => {
await changeGctCategory(page, GCT_CATEGORIES.PROTEIN, GCT_CATEGORIES.RNA);

await test.step('clear all items', async () => {
await page.getByRole('button', { name: 'Clear All' }).click();
await expect(page.getByText(/Pinned Genes/i)).toBeHidden();
});

await pinGeneViaSearch(page, rnaCategoryGene);

await test.step('confirm pinned gene', async () => {
await expectPinnedGenesCountText(page, 1);
await confirmPinnedItemsByGeneName(page, rnaCategoryGene, 1);
});
});

await test.step('Protein category pins have changed', async () => {
await changeGctCategory(page, GCT_CATEGORIES.RNA, GCT_CATEGORIES.PROTEIN);
await changeGctSubcategory(
page,
GCT_CATEGORIES.PROTEIN,
GCT_PROTEIN_SUBCATEGORIES.SRM,
GCT_PROTEIN_SUBCATEGORIES.TMT,
);
await expectPinnedGenesCountText(page, 1);
await expectPinnedProteinsCountText(page, rnaCategoryProteins.length);
await confirmPinnedProteins(page, rnaCategoryGene, rnaCategoryProteins);
});

await test.step('RNA category pins are maintained', async () => {
await changeGctCategory(page, GCT_CATEGORIES.PROTEIN, GCT_CATEGORIES.RNA);

await test.step('confirm pinned gene', async () => {
await expectPinnedGenesCountText(page, 1);
await confirmPinnedItemsByGeneName(page, rnaCategoryGene, 1);
});
});
});

test('Last pinned proteins are maintained even if genes were pinned initially', async ({
page,
}) => {
const rnaCategoryGene = geneWithMultipleProteinsTMT.name;
const proteinCategoryGene = gene2WithMultipleProteinsTMT.name;
const proteinCategoryProteins = gene2WithMultipleProteinsTMT.uniProtIds;

await test.step('pin genes in RNA category', async () => {
await page.goto(URL_GCT);
await expectGctPageLoaded(page, GCT_CATEGORIES.RNA, GCT_RNA_SUBCATEGORIES.AD);

await pinGeneViaSearch(page, rnaCategoryGene);
await confirmPinnedItemsByGeneName(page, rnaCategoryGene, 1);
});

await test.step('pin proteins in Protein category', async () => {
await changeGctCategory(page, GCT_CATEGORIES.RNA, GCT_CATEGORIES.PROTEIN);
await changeGctSubcategory(
page,
GCT_CATEGORIES.PROTEIN,
GCT_PROTEIN_SUBCATEGORIES.SRM,
GCT_PROTEIN_SUBCATEGORIES.TMT,
);

await test.step('clear all items', async () => {
await page.getByRole('button', { name: 'Clear All' }).click();
await expect(page.getByText(/Pinned Genes/i)).toBeHidden();
});

await pinAllItemsViaSearchByGene(page, proteinCategoryGene);

await test.step('confirm pinned items', async () => {
await expectPinnedGenesCountText(page, 1);
await expectPinnedProteinsCountText(page, proteinCategoryProteins.length);
await confirmPinnedProteins(page, proteinCategoryGene, proteinCategoryProteins);
});
});

await test.step('RNA category pins have changed', async () => {
await changeGctCategory(page, GCT_CATEGORIES.PROTEIN, GCT_CATEGORIES.RNA);
await expectPinnedGenesCountText(page, 1);
await confirmPinnedItemsByGeneName(page, proteinCategoryGene, 1);
});

await test.step('Protein category pins are maintained', async () => {
await changeGctCategory(page, GCT_CATEGORIES.RNA, GCT_CATEGORIES.PROTEIN);
await changeGctSubcategory(
page,
GCT_CATEGORIES.PROTEIN,
GCT_PROTEIN_SUBCATEGORIES.SRM,
GCT_PROTEIN_SUBCATEGORIES.TMT,
);

await test.step('confirm pinned items', async () => {
await expectPinnedGenesCountText(page, 1);
await expectPinnedProteinsCountText(page, proteinCategoryProteins.length);
await confirmPinnedProteins(page, proteinCategoryGene, proteinCategoryProteins);
});
});
});
});
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