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vignettes/UsersGuide.Rmd

@@ -130,15 +130,15 @@ plot_gene(nmr, "Peg3", anno_regions = bsseq_dmr)
 
 Individual long reads can be visualised using the `spaghetti` argument.
 
-```{r, warning = FALSE}
+```{r, warning = FALSE, eval = FALSE}
 # warnings have been turned off in this vignette, but this will generally
 # generate many warnings as the smoothing for many reads will fail
 plot_gene(nmr, "Peg3", anno_regions = bsseq_dmr, spaghetti = TRUE)
 ```
 
 Alternatively the individual read information can be represented by a heatmap.
 
-```{r, warning = FALSE}
+```{r, warning = FALSE, eval = FALSE}
 plot_gene(nmr, "Peg3", anno_regions = bsseq_dmr, heatmap = TRUE)
 ```