-
Notifications
You must be signed in to change notification settings - Fork 190
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Automatic curation with metrics #2918
Merged
alejoe91
merged 209 commits into
SpikeInterface:main
from
anoushkajain:curation_metrics
Jan 10, 2025
Merged
Automatic curation with metrics #2918
alejoe91
merged 209 commits into
SpikeInterface:main
from
anoushkajain:curation_metrics
Jan 10, 2025
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
for more information, see https://pre-commit.ci
for more information, see https://pre-commit.ci
…ikeinterface into curation_metrics
for more information, see https://pre-commit.ci
for more information, see https://pre-commit.ci
for more information, see https://pre-commit.ci
…ikeinterface into curation_metrics
for more information, see https://pre-commit.ci
for more information, see https://pre-commit.ci
alejoe91
added
the
hackathon-24
Contributions during the SpikeInterface Hackathon May 24
label
Jun 1, 2024
alejoe91
changed the title
automatic curation with metrics
Automatic curation with metrics
Jun 4, 2024
@chrishalcrow @anoushkajain let's have a final push on this. Just reviewing the generated docs, there are some failures:
|
alejoe91
reviewed
Jan 8, 2025
alejoe91
reviewed
Jan 8, 2025
Question for @anoushkajain and @chrishalcrow |
alejoe91
reviewed
Jan 10, 2025
alejoe91
approved these changes
Jan 10, 2025
@chrishalcrow fixed a couple of broken refs in the docs due to the mertics -> metrics correction in the file name. Merging this! thank you all for working on this! It's a great contribution for the community :) |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Labels
curation
Related to curation module
hackathon-24
Contributions during the SpikeInterface Hackathon May 24
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Solves #2479
This PR introduces model-based metric curation in the curation module.
The core functionality is implemented by the
auto_label_units
, which used scikit-learn pre-trained model inskops
format to predict labels based on metrics (could be quality, template, or both).The PR also adds the possibility to train your own model and to automatically access and apply pre-trained models available on hugging face.