Increase submodule usability #10
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…when process is called within a submodule
priesgo
requested changes
Feb 6, 2024
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| script: | ||
| two_pass_mode_param = params.star_two_pass_mode ? "--twopassMode Basic" : "" | ||
| """ | ||
| STAR --genomeDir ${params.reference} ${two_pass_mode_param} ${params.additional_args} \ | ||
| STAR --genomeDir ${reference} ${two_pass_mode_param} ${params.additional_args} \ |
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you are missing the definition of input parameter val(reference)
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Added missing input parameter in latest commit
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Minor changes in reference file calls and automated file name creation to ensure usability of processes in subworkflows.